CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

cytosol 2
plastid 1
peroxisome 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d050224_P002	Maize	peroxisome	87.74	89.46
Os08t0245200-01	Rice	extracellular	83.89	84.93
GSMUA_Achr9P22840_001	Banana	peroxisome	45.18	67.54
GSMUA_Achr1P23450_001	Banana	peroxisome	61.47	67.5
GSMUA_Achr4P12590_001	Banana	peroxisome	57.79	67.48
GSMUA_Achr4P05820_001	Banana	peroxisome	61.12	66.86
GSMUA_AchrUn_...	Banana	peroxisome	60.42	66.6
GSMUA_Achr7P05070_001	Banana	peroxisome	56.74	65.72
EER90150	Sorghum	peroxisome	63.4	64.99
EES04623	Sorghum	peroxisome	61.65	63.42
EES15085	Sorghum	peroxisome	60.77	62.86
CDY53918	Canola	peroxisome	20.49	62.57
CDY32418	Canola	peroxisome	19.96	62.3
CDX87831	Canola	peroxisome	59.54	61.71
CDY43921	Canola	peroxisome	59.37	61.52
Bra030429.1-P	Field mustard	peroxisome	59.19	61.23
AT1G51680.1	Thale cress	peroxisome	59.37	60.43
PGSC0003DMT400074444	Potato	peroxisome	56.57	59.48
AT3G21240.1	Thale cress	peroxisome	57.79	59.35
PGSC0003DMT400036886	Potato	peroxisome	56.57	59.27
CDY19568	Canola	peroxisome	57.27	59.24
Solyc06g068650.2.1	Tomato	peroxisome	56.22	59.12
Bra031266.1-P	Field mustard	peroxisome	57.09	59.06
Solyc03g117870.2.1	Tomato	plastid	56.04	58.72
VIT_11s0052g01090.t01	Wine grape	peroxisome	55.69	58.03
VIT_11s0052g01110.t01	Wine grape	peroxisome	54.64	57.88
KRH09616	Soybean	mitochondrion, peroxisome	54.29	57.62
EES05680	Sorghum	peroxisome	56.22	56.71
PGSC0003DMT400051216	Potato	peroxisome	56.57	56.57
KRH02884	Soybean	peroxisome	54.12	56.49
KRH23700	Soybean	peroxisome	54.12	56.49
KRH02885	Soybean	peroxisome	52.89	56.34
Solyc07g008360.1.1	Tomato	peroxisome	55.87	56.16
Solyc12g042460.1.1	Tomato	peroxisome	52.89	55.11
AT3G21230.1	Thale cress	peroxisome	54.82	54.91
PGSC0003DMT400037485	Potato	peroxisome	52.54	54.74
CDY48875	Canola	mitochondrion, plastid, vacuole	42.38	54.5
CDX82208	Canola	peroxisome	53.59	53.5
CDY06431	Canola	peroxisome	51.49	53.16
Bra001819.1-P	Field mustard	peroxisome	53.42	53.14
Bra031263.1-P	Field mustard	peroxisome	51.31	52.98
CDY68920	Canola	peroxisome	51.31	52.98
CDY32416	Canola	peroxisome	53.06	52.79
KRH02886	Soybean	peroxisome, plastid	52.01	52.66
Bra031265.1-P	Field mustard	peroxisome	51.14	52.24
CDY19570	Canola	peroxisome	50.96	52.06
Bra001820.1-P	Field mustard	peroxisome	51.66	50.43
KRH19011	Soybean	peroxisome	49.04	49.82
CDY65966	Canola	peroxisome	26.8	43.34
CDY06435	Canola	vacuole	33.27	42.7
CDY71190	Canola	peroxisome	27.15	41.89
KXG40154	Sorghum	peroxisome	38.0	39.24
OQU91476	Sorghum	peroxisome	38.0	38.96
EER95569	Sorghum	peroxisome	37.48	38.7
EER99996	Sorghum	plastid	37.48	35.37
EER98656	Sorghum	peroxisome, plastid	33.45	34.41
KXG38810	Sorghum	peroxisome	34.5	34.38
EER97853	Sorghum	peroxisome, plastid	33.27	34.36
EES01913	Sorghum	peroxisome, plastid	33.27	34.23
KXG38162	Sorghum	peroxisome	31.87	32.33
OQU88316	Sorghum	peroxisome, plastid	32.75	31.27
KXG26308	Sorghum	peroxisome	23.12	24.22

Protein Annotations

Gene3D:3.30.300.30	Gene3D:3.40.50.12780	MapMan:7.8.1.1	EntrezGene:8082428	MapMan:9.2.1.3	InterPro:AMP-bd_C
InterPro:AMP-binding_CS	InterPro:AMP-dep_Synth/Lig	UniProt:C5YJI8	EnsemblPlants:EES13602	ProteinID:EES13602	ProteinID:EES13602.1
GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	PFAM:PF00501	PFAM:PF13193
ScanProsite:PS00455	PANTHER:PTHR24096	PANTHER:PTHR24096:SF217	EnsemblPlantsGene:SORBI_3007G089900	SUPFAM:SSF56801	unigene:Sbi.1866
UniParc:UPI0001A87C28	RefSeq:XP_002444107.1	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr7:+:12684979..12699403

Molecular Weight (calculated)

61372.2 Da

IEP (calculated)

4.782

GRAVY (calculated)

0.079

Length

571 amino acids

Sequence
(BLAST)

001: MGSTEEQQQP VPVVAAAVEE EEASPEIIFR SKLPDIAITN FLPLHRYCFE RLPEVADRPC LIDGATGAVR TYAEVDRLTR RLAAALRRAP LGLGRGAVVM
101: NLMLNSAEFV LSFFAASRVG AAVTTANPMS TPHEIANQIA ASGATVVFTE SMAVDKLPAV QDDGGGLTVV LIDAHRDGCL HFWDDVMASV PDDEDREAEE
201: AAAAAGFDPD DVVALPYSSG TTGLPKGVML THRSLSTSVA QQVDGDNPNI GFTADDVILC SLPMFHIYSL NTIMMCGLRV GAAIVVMRRF DLARMMELVE
301: RHRITIAPLV PPIVVAVAKS DEAASHDLSS VRMVLSGAAP MGKDIEDAFM AKLPGAVLGQ GYGMTEAGPV LSMCLAFAKE PFKVKSGACG TVVRNAELKI
401: VDPDTGKSLA RNLPGEICIR GQQIMKGYLN NPDATKNSID ADGWLHTGDV GFVDDDDEIF IVDRLKEIIK YKGLQVAPAE IEALLITHPS IADAAVVGKQ
501: VEPEIGEIPV AFVAKAKGSE LSEDDVKQFV AKEVIYYKKV REVIFIDKIP KAPSGKILRK ELRKQLQQQV A

Best Arabidopsis Sequence Match ( AT1G51680.1 )
(BLAST)

001: MAPQEQAVSQ VMEKQSNNNN SDVIFRSKLP DIYIPNHLSL HDYIFQNISE FATKPCLING PTGHVYTYSD VHVISRQIAA NFHKLGVNQN DVVMLLLPNC
101: PEFVLSFLAA SFRGATATAA NPFFTPAEIA KQAKASNTKL IITEARYVDK IKPLQNDDGV VIVCIDDNES VPIPEGCLRF TELTQSTTEA SEVIDSVEIS
201: PDDVVALPYS SGTTGLPKGV MLTHKGLVTS VAQQVDGENP NLYFHSDDVI LCVLPMFHIY ALNSIMLCGL RVGAAILIMP KFEINLLLEL IQRCKVTVAP
301: MVPPIVLAIA KSSETEKYDL SSIRVVKSGA APLGKELEDA VNAKFPNAKL GQGYGMTEAG PVLAMSLGFA KEPFPVKSGA CGTVVRNAEM KIVDPDTGDS
401: LSRNQPGEIC IRGHQIMKGY LNNPAATAET IDKDGWLHTG DIGLIDDDDE LFIVDRLKEL IKYKGFQVAP AELEALLIGH PDITDVAVVA MKEEAAGEVP
501: VAFVVKSKDS ELSEDDVKQF VSKQVVFYKR INKVFFTESI PKAPSGKILR KDLRAKLANG L

Arabidopsis Description

4CL14-coumarate-CoA ligase 1 [Source:UniProtKB/TrEMBL;Acc:A0A1P8SNN0]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.