CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

cytosol 1
peroxisome 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	cytosol, peroxisome
BaCelLo:	cytosol
MultiLoc:	peroxisome
PProwler:	peroxisome
WoLF PSORT:	peroxisome
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY68920	Canola	peroxisome	96.56	96.56
CDY19570	Canola	peroxisome	82.82	81.93
CDX82208	Canola	peroxisome	83.36	80.59
CDY32416	Canola	peroxisome	82.46	79.44
CDY53918	Canola	peroxisome	26.76	79.14
CDY32418	Canola	peroxisome	25.86	78.14
CDY71190	Canola	peroxisome	52.08	77.84
CDY48875	Canola	mitochondrion, plastid, vacuole	62.03	77.25
CDY65966	Canola	peroxisome	47.38	74.22
CDX87831	Canola	peroxisome	61.84	62.07
CDY43921	Canola	peroxisome	61.66	61.89
CDY19568	Canola	peroxisome	61.3	61.41
GSMUA_Achr4P12590_001	Banana	peroxisome	54.25	61.35
GSMUA_Achr9P22840_001	Banana	peroxisome	42.13	60.99
GSMUA_AchrUn_...	Banana	peroxisome	56.06	59.85
GSMUA_Achr7P05070_001	Banana	peroxisome	53.35	59.84
GSMUA_Achr1P23450_001	Banana	peroxisome	56.06	59.62
GSMUA_Achr4P05820_001	Banana	peroxisome	55.7	59.0
TraesCS2B01G171200.1	Wheat	peroxisome	56.42	57.78
TraesCS2D01G150400.1	Wheat	peroxisome	56.24	57.59
TraesCS2A01G145800.1	Wheat	peroxisome	56.24	57.38
Os08t0448000-01	Rice	peroxisome	55.88	57.33
KRH02886	Soybean	peroxisome, plastid	58.23	57.09
EES15085	Sorghum	peroxisome	56.78	56.88
Zm00001d032103_P001	Maize	peroxisome	56.78	56.58
TraesCS6B01G179900.2	Wheat	peroxisome	54.43	54.93
Os02t0177600-01	Rice	plasma membrane	54.97	54.87
TraesCS6A01G151700.1	Wheat	peroxisome	54.07	54.76
TraesCS6D01G141700.1	Wheat	peroxisome	54.25	54.64
HORVU6Hr1G030390.2	Barley	peroxisome	54.43	54.43
Os06t0656500-01	Rice	peroxisome	54.97	54.38
EES04623	Sorghum	peroxisome	54.25	54.05
EER90150	Sorghum	peroxisome	54.43	54.04
TraesCS7D01G483400.1	Wheat	peroxisome	54.43	53.75
TraesCS7A01G496200.1	Wheat	peroxisome	54.07	53.68
CDY07442	Canola	peroxisome	53.89	53.6
KRH19011	Soybean	peroxisome	54.07	53.2
CDY39293	Canola	peroxisome	53.53	53.14
Os08t0245200-01	Rice	extracellular	53.53	52.48
EES13602	Sorghum	peroxisome	53.16	51.49
Zm00001d050224_P002	Maize	peroxisome	52.08	51.43
HORVU7Hr1G111130.3	Barley	peroxisome, plastid	54.43	51.02
Zm00001d015459_P003	Maize	peroxisome	53.53	50.43
CDY45731	Canola	peroxisome	13.38	48.05
Zm00001d046915_P001	Maize	extracellular	54.79	47.42
CDY06435	Canola	vacuole	35.26	43.82
CDY46375	Canola	peroxisome	39.24	40.04
CDY39155	Canola	peroxisome	38.52	39.3
CDY45730	Canola	vacuole	31.65	38.13
CDY46376	Canola	peroxisome	37.07	38.03
CDY71478	Canola	vacuole	31.28	37.69
CDY39153	Canola	peroxisome	36.71	37.66
CDX96636	Canola	golgi, vacuole	25.68	37.08
CDY31883	Canola	plastid	35.62	36.28
CDX96638	Canola	peroxisome	34.54	36.24
CDY01370	Canola	peroxisome, plastid	35.8	36.0
HORVU0Hr1G002720.3	Barley	mitochondrion, plastid	35.44	35.9
CDX96633	Canola	plastid	35.8	35.8
CDY39816	Canola	peroxisome	34.9	35.74
CDY33631	Canola	plastid	35.62	35.62
CDY31472	Canola	peroxisome	33.09	35.6
CDY01369	Canola	plastid	34.9	35.54
CDY29527	Canola	peroxisome	33.45	34.91
CDY33628	Canola	plastid	34.54	34.6
CDX96637	Canola	plastid	34.54	34.54
CDY31474	Canola	peroxisome	35.8	34.14
CDY33627	Canola	peroxisome	33.82	33.57
CDX78914	Canola	peroxisome, plastid	34.36	33.1
CDY33629	Canola	golgi, vacuole	24.77	32.39
CDX99401	Canola	peroxisome	31.28	25.9
CDY03253	Canola	peroxisome	35.08	12.57
CDX78913	Canola	cytosol	0.18	0.56

Protein Annotations

Gene3D:3.30.300.30	Gene3D:3.40.50.12780	MapMan:7.8.1.1	MapMan:9.2.1.3	GO:A0A078EZ69	InterPro:AMP-bd_C
InterPro:AMP-binding_CS	InterPro:AMP-dep_Synth/Lig	EnsemblPlants:CDY06431	ProteinID:CDY06431	ProteinID:CDY06431.1	GO:GO:0003674
GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	EnsemblPlantsGene:GSBRNA2T00122445001	PFAM:PF00501	PFAM:PF13193
ScanProsite:PS00455	PANTHER:PTHR24096	PANTHER:PTHR24096:SF207	SUPFAM:SSF56801	UniParc:UPI0004EEC3EF	SEG:seg

Description

BnaC05g30990D

Coordinates

chrLK031969:-:843771..848765

Molecular Weight (calculated)

60714.8 Da

IEP (calculated)

7.891

GRAVY (calculated)

-0.002

Length

553 amino acids

Sequence
(BLAST)

001: MAFRQQETLS LTKKTDQDFI FRSKLPDISI PNHLPLAEYV FQKFSGDGDG DSTTTCLIDS ATGRTFTYAN VQITLRRIAA GLHRLGIRHG DTVMLLLPNS
101: PEFALSFLAA VYLGAVSTSA NPLFTQTEIA KQAKASAAKM IITKPCYVHK LTNLQQLGAV IVCVDDRNDV VSLADGSVRF TDLTQADEAE LPKPEISPDD
201: TVSIPYSSGT TGLPKGVMIS HKGLVTSIAQ KVDGENPNLN FTRDDVIICF LPMFHTFTHS SLMLSAMRTG AALLILPRFE LNLVMKMVQK YKVTVVPMAP
301: PVVLAFVKSP ETEKYDLSSV RMMLSGSATL KKELEDAVRL KLPNAIFGQS YGMTEAGTVA NSLAFAKHPF KTKSGSCGTV IRNAEMKVVD TITGASLPRN
401: KAGEICIRGH QLMKGYLNDP EATARTIDKD GWLHTGDIGF VDDDDEIFIV DRLKELIKFK GYQVAPAELE ALLIFHPYIE DAAVVAMTDE VADEVPVAFV
501: VRSEGSQLTE DDIKNYVNKQ VVHYKRIKMV FFVKAIPKSA SGKLLRKVLR AKL

Best Arabidopsis Sequence Match ( AT3G21230.1 )
(BLAST)

001: MVLQQQTHFL TKKIDQEDEE EEPSHDFIFR SKLPDIFIPN HLPLTDYVFQ RFSGDGDGDS STTCIIDGAT GRILTYADVQ TNMRRIAAGI HRLGIRHGDV
101: VMLLLPNSPE FALSFLAVAY LGAVSTTANP FYTQPEIAKQ AKASAAKMII TKKCLVDKLT NLKNDGVLIV CLDDDGDNGV VSSSDDGCVS FTELTQADET
201: ELLKPKISPE DTVAMPYSSG TTGLPKGVMI THKGLVTSIA QKVDGENPNL NFTANDVILC FLPMFHIYAL DALMLSAMRT GAALLIVPRF ELNLVMELIQ
301: RYKVTVVPVA PPVVLAFIKS PETERYDLSS VRIMLSGAAT LKKELEDAVR LKFPNAIFGQ GYGMTESGTV AKSLAFAKNP FKTKSGACGT VIRNAEMKVV
401: DTETGISLPR NKSGEICVRG HQLMKGYLND PEATARTIDK DGWLHTGDIG FVDDDDEIFI VDRLKELIKF KGYQVAPAEL EALLISHPSI DDAAVVAMKD
501: EVADEVPVAF VARSQGSQLT EDDVKSYVNK QVVHYKRIKM VFFIEVIPKA VSGKILRKDL RAKLETMCSK

Arabidopsis Description

4CL44-coumarate--CoA ligase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9LU36]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.