Factsheet for TraesCS2D01G150400.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

peroxisome 2
mitochondrion 1
endoplasmic reticulum 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	endoplasmic reticulum, peroxisome
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	endoplasmic reticulum
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G171200.1	Wheat	peroxisome	98.52	98.52
TraesCS2A01G145800.1	Wheat	peroxisome	96.85	96.49
Os08t0448000-01	Rice	peroxisome	87.04	87.2
EES15085	Sorghum	peroxisome	85.19	83.33
Zm00001d032103_P001	Maize	peroxisome	85.0	82.7
GSMUA_Achr9P22840_001	Banana	peroxisome	48.89	69.11
GSMUA_Achr4P12590_001	Banana	peroxisome	61.67	68.1
GSMUA_Achr4P05820_001	Banana	peroxisome	65.74	68.01
CDY53918	Canola	peroxisome	23.52	67.91
GSMUA_AchrUn_...	Banana	peroxisome	64.81	67.57
GSMUA_Achr1P23450_001	Banana	peroxisome	65.0	67.5
GSMUA_Achr7P05070_001	Banana	peroxisome	60.56	66.33
CDY32418	Canola	peroxisome	22.04	65.03
TraesCS6D01G141700.1	Wheat	peroxisome	65.19	64.12
TraesCS7D01G483400.1	Wheat	peroxisome	66.3	63.93
PGSC0003DMT400074444	Potato	peroxisome	63.52	63.17
CDY43921	Canola	peroxisome	64.07	62.79
VIT_11s0052g01090.t01	Wine grape	peroxisome	63.7	62.77
CDX87831	Canola	peroxisome	63.89	62.61
Bra030429.1-P	Field mustard	peroxisome	63.89	62.5
Solyc06g068650.2.1	Tomato	peroxisome	62.59	62.25
Solyc03g117870.2.1	Tomato	plastid	62.78	62.2
PGSC0003DMT400036886	Potato	peroxisome	62.78	62.2
CDY19568	Canola	peroxisome	63.52	62.14
Bra031266.1-P	Field mustard	peroxisome	63.52	62.14
AT3G21240.1	Thale cress	peroxisome	63.89	62.05
AT1G51680.1	Thale cress	peroxisome	64.44	62.03
KRH02885	Soybean	peroxisome	61.48	61.94
KRH02884	Soybean	peroxisome	62.41	61.61
VIT_11s0052g01110.t01	Wine grape	peroxisome	61.3	61.41
KRH09616	Soybean	mitochondrion, peroxisome	60.37	60.59
KRH23700	Soybean	peroxisome	60.74	59.96
PGSC0003DMT400051216	Potato	peroxisome	62.96	59.54
Solyc07g008360.1.1	Tomato	peroxisome	62.59	59.51
TraesCS6D01G248000.1	Wheat	peroxisome, plasma membrane	62.22	59.15
PGSC0003DMT400037485	Potato	peroxisome	59.07	58.21
Solyc12g042460.1.1	Tomato	peroxisome	58.89	58.03
KRH02886	Soybean	peroxisome, plastid	59.63	57.09
CDY68920	Canola	peroxisome	57.59	56.24
CDY06431	Canola	peroxisome	57.59	56.24
Bra031263.1-P	Field mustard	peroxisome	57.41	56.06
CDY19570	Canola	peroxisome	57.96	55.99
Bra031265.1-P	Field mustard	peroxisome	57.78	55.81
CDY48875	Canola	mitochondrion, plastid, vacuole	45.74	55.63
AT3G21230.1	Thale cress	peroxisome	58.7	55.61
CDX82208	Canola	peroxisome	57.59	54.37
CDY32416	Canola	peroxisome	57.41	54.01
Bra001819.1-P	Field mustard	peroxisome	57.41	54.01
Bra001820.1-P	Field mustard	peroxisome	57.22	52.82
HORVU0Hr1G002720.3	Barley	mitochondrion, plastid	53.33	52.75
KRH19011	Soybean	peroxisome	54.44	52.31
CDY71190	Canola	peroxisome	31.48	45.95
CDY65966	Canola	peroxisome	29.26	44.76
CDY06435	Canola	vacuole	36.85	44.72
TraesCS4D01G268400.1	Wheat	peroxisome	42.04	41.5
TraesCS4D01G323500.1	Wheat	plastid	37.96	37.21
TraesCS4D01G074500.1	Wheat	plastid	35.93	35.73
TraesCS1D01G200200.1	Wheat	peroxisome	37.04	35.21
TraesCS3D01G388100.1	Wheat	peroxisome	36.11	34.7
TraesCS2D01G272200.1	Wheat	plastid	38.89	33.93
TraesCS4D01G074700.1	Wheat	peroxisome	32.96	32.6
TraesCS4D01G074600.1	Wheat	peroxisome	32.41	31.76
TraesCS5D01G561500.1	Wheat	peroxisome	32.59	31.71
TraesCS3D01G388000.2	Wheat	peroxisome, plastid	35.0	31.71
TraesCS3D01G468000.1	Wheat	peroxisome	31.3	30.51

Protein Annotations

EnsemblPlants:TraesCS2D01G150400.1	EnsemblPlantsGene:TraesCS2D01G150400	Gene3D:3.30.300.30	Gene3D:3.40.50.12780	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	InterPro:AMP-bd_C	InterPro:AMP-binding_CS	InterPro:AMP-dep_Synth/Lig	PANTHER:PTHR24096
PANTHER:PTHR24096:SF244	PFAM:PF00501	PFAM:PF13193	ScanProsite:PS00455	SEG:seg	SUPFAM:SSF56801
TIGR:cd05904	MapMan:7.8.1.1	MapMan:9.2.1.3	:	:	:

Description

No Description!

Coordinates

chr2D:-:92919313..92921156

Molecular Weight (calculated)

57181.6 Da

IEP (calculated)

5.998

GRAVY (calculated)

0.186

Length

540 amino acids

Sequence
(BLAST)

001: MGSLPEQQQV VFRSTLPDIA IPDHLPLHDY VFERLAERRD RACLIDGATG ETLTVGDVHG LSRRVAAGLH SLGVRHGSTV MLLLPNCVEF ALAFLAASRL
101: GAATTTANPL HTPPEIAKQA QASRATLVVT EPAFVAKVRG LAGVTVVATG DGAEGCASFA DLAAADDSAL PEAPIDVASD VVALPYSSGT TGLPKGVMLS
201: HRGLVTSVAQ LVDGDNPNLH LREDDVVLCV LPMFHVYSLH SILLCGLRAG AALVVMKRFD TVKMMELVER HGITIAPLVP PIVVEMAKGD AMDRHDLSSV
301: RMVISGAAPM GKELQDIIHA KLPNAVLGQG YGMTEAGPVL SMCMAFAKEP SPVKSGACGT VVRNAELKIV DPETGLCLGR NQPGEICIRG RQIMKGYLDN
401: PAATAETVDK DGWLHTGDVG FVDADDEIFI VDRLKELIKY KGFQVAPAEL EAMLIAHPGI ADAAVVPMKD DASGEVPVAF VVPSSGGADM TEDEIKQYVA
501: KQVVFYKRLQ KVFFVSSIPK APSGKILRKD LRAKLAAGSC

Best Arabidopsis Sequence Match ( AT3G21230.1 )
(BLAST)

001: MVLQQQTHFL TKKIDQEDEE EEPSHDFIFR SKLPDIFIPN HLPLTDYVFQ RFSGDGDGDS STTCIIDGAT GRILTYADVQ TNMRRIAAGI HRLGIRHGDV
101: VMLLLPNSPE FALSFLAVAY LGAVSTTANP FYTQPEIAKQ AKASAAKMII TKKCLVDKLT NLKNDGVLIV CLDDDGDNGV VSSSDDGCVS FTELTQADET
201: ELLKPKISPE DTVAMPYSSG TTGLPKGVMI THKGLVTSIA QKVDGENPNL NFTANDVILC FLPMFHIYAL DALMLSAMRT GAALLIVPRF ELNLVMELIQ
301: RYKVTVVPVA PPVVLAFIKS PETERYDLSS VRIMLSGAAT LKKELEDAVR LKFPNAIFGQ GYGMTESGTV AKSLAFAKNP FKTKSGACGT VIRNAEMKVV
401: DTETGISLPR NKSGEICVRG HQLMKGYLND PEATARTIDK DGWLHTGDIG FVDDDDEIFI VDRLKELIKF KGYQVAPAEL EALLISHPSI DDAAVVAMKD
501: EVADEVPVAF VARSQGSQLT EDDVKSYVNK QVVHYKRIKM VFFIEVIPKA VSGKILRKDL RAKLETMCSK

Arabidopsis Description

4CL44-coumarate--CoA ligase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9LU36]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.