Factsheet for Bra001819.1-P

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

cytosol 1
plastid 2
peroxisome 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX82208	Canola	peroxisome	98.78	99.13
AT3G21230.1	Thale cress	peroxisome	87.28	87.89
Bra031263.1-P	Field mustard	peroxisome	80.66	83.73
Bra031265.1-P	Field mustard	peroxisome	80.14	82.29
Bra001820.1-P	Field mustard	peroxisome	83.28	81.71
Bra030429.1-P	Field mustard	peroxisome	62.72	65.22
Bra031266.1-P	Field mustard	peroxisome	62.02	64.49
GSMUA_Achr4P12590_001	Banana	peroxisome	54.01	63.39
GSMUA_Achr9P22840_001	Banana	peroxisome	41.99	63.09
GSMUA_AchrUn_...	Banana	peroxisome	55.92	61.97
GSMUA_Achr4P05820_001	Banana	peroxisome	56.27	61.88
GSMUA_Achr1P23450_001	Banana	peroxisome	55.75	61.54
GSMUA_Achr7P05070_001	Banana	peroxisome	52.79	61.46
KRH02886	Soybean	peroxisome, plastid	57.49	58.51
EES15085	Sorghum	peroxisome	55.75	57.97
Os08t0448000-01	Rice	peroxisome	54.36	57.88
Zm00001d032103_P001	Maize	peroxisome	55.75	57.66
TraesCS2B01G171200.1	Wheat	peroxisome	54.18	57.59
TraesCS2D01G150400.1	Wheat	peroxisome	54.01	57.41
TraesCS2A01G145800.1	Wheat	peroxisome	54.01	57.2
TraesCS6B01G179900.2	Wheat	peroxisome	53.31	55.84
TraesCS6A01G151700.1	Wheat	peroxisome	52.96	55.68
TraesCS6D01G141700.1	Wheat	peroxisome	53.14	55.56
Os02t0177600-01	Rice	plasma membrane	53.48	55.42
HORVU6Hr1G030390.2	Barley	peroxisome	53.31	55.33
EER90150	Sorghum	peroxisome	53.66	55.3
KRH19011	Soybean	peroxisome	54.01	55.16
EES04623	Sorghum	peroxisome	53.14	54.95
Os06t0656500-01	Rice	peroxisome	53.48	54.92
Bra004109.1-P	Field mustard	peroxisome	52.96	54.68
Os08t0245200-01	Rice	extracellular	53.66	54.61
TraesCS7A01G496200.1	Wheat	peroxisome	52.79	54.4
TraesCS7D01G483400.1	Wheat	peroxisome	52.79	54.11
Zm00001d050224_P002	Maize	peroxisome	52.26	53.57
EES13602	Sorghum	peroxisome	53.14	53.42
HORVU7Hr1G111130.3	Barley	peroxisome, plastid	53.14	51.69
Zm00001d015459_P003	Maize	peroxisome	52.26	51.11
Zm00001d046915_P001	Maize	extracellular	53.83	48.36
Bra029561.1-P	Field mustard	peroxisome	39.37	41.7
Bra016466.1-P	Field mustard	peroxisome	35.02	36.68
HORVU0Hr1G002720.3	Barley	mitochondrion, plastid	34.84	36.63
Bra016463.1-P	Field mustard	plastid	35.02	36.35
Bra012232.1-P	Field mustard	peroxisome, plastid	34.67	36.25
Bra012233.1-P	Field mustard	plastid	33.62	35.61
Bra025822.1-P	Field mustard	peroxisome	33.1	34.99
Bra013369.1-P	Field mustard	peroxisome, plastid	34.84	34.9
Bra029229.1-P	Field mustard	peroxisome	33.97	34.88
Bra029560.1-P	Field mustard	peroxisome	31.88	34.27
Bra016464.1-P	Field mustard	plastid	33.1	33.87
Bra016465.1-P	Field mustard	plastid	27.7	32.38
Bra036646.1-P	Field mustard	peroxisome	34.49	13.39

Protein Annotations

Gene3D:3.30.300.30	Gene3D:3.40.50.12780	MapMan:7.8.1.1	MapMan:9.2.1.3	InterPro:AMP-bd_C	InterPro:AMP-binding_CS
InterPro:AMP-dep_Synth/Lig	EnsemblPlantsGene:Bra001819	EnsemblPlants:Bra001819.1	EnsemblPlants:Bra001819.1-P	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009699	GO:GO:0009987	GO:GO:0016207
GO:GO:0019748	UniProt:M4CC89	PFAM:PF00501	PFAM:PF13193	ScanProsite:PS00455	PANTHER:PTHR24096
PANTHER:PTHR24096:SF207	SUPFAM:SSF56801	UniParc:UPI0002540634	SEG:seg	:	:

Description

AT3G21230 (E=7e-258) 4CL5 | 4CL5 (4-coumarate:CoA ligase 5); 4-coumarate-CoA ligase

Coordinates

chrA03:-:18643880..18649799

Molecular Weight (calculated)

63112.3 Da

IEP (calculated)

5.057

GRAVY (calculated)

-0.057

Length

574 amino acids

Sequence
(BLAST)

001: MVLQQQQQTL FVTKKTDQEL PLKTDPEPSH DFIFRSKLPD ISIPNHLPLT DYVFQKFSGD GDGDGDSTAT CLIDGATGRI FTYGDVQISL RRIAAGIHRL
101: GIRQRDTVML LLPNSPEFAL SFLAVAYLGA VSTTANPFYT ESEIEKQAKA SATKMIITKS CYVDKLTNMK NDGVLIVCVE DENDAVPVAD GCVSFKELAQ
201: ADETELPKPQ ISPEDTVAMP YSSGTTGLPK GVMITHKGLV TTIAQKVDGE NPNVNFTGDD VILCFLPMFH IYALDALMLS AMRTGAAILI VPRFELNLVM
301: ELIQRYKVTV VPVAPPVVLA FVKSQETEKY DLSSVRMMLS GAATLKKELE DAVRLKFPNA IFGQGYGMTE SGTVAKSLAF AKNPFKTKSG ACGTVIRNAE
401: MKVVDTITGV SLPRNKPGEI CIRGDQLMKG YLNDPEATAI TIDKDGWLHT GDIGFVDDDD EVFIVDRLKE LIKFKGYQVA PAELEALLIS HPYIEDAAVV
501: AMKDEVADEV PVAYVVRSEG SQLTEDDVKS YVNKQVVHYK RIKMVFFIEA IPKAVSGKIL RKELRAKLES EYPK

Best Arabidopsis Sequence Match ( AT3G21230.1 )
(BLAST)

001: MVLQQQTHFL TKKIDQEDEE EEPSHDFIFR SKLPDIFIPN HLPLTDYVFQ RFSGDGDGDS STTCIIDGAT GRILTYADVQ TNMRRIAAGI HRLGIRHGDV
101: VMLLLPNSPE FALSFLAVAY LGAVSTTANP FYTQPEIAKQ AKASAAKMII TKKCLVDKLT NLKNDGVLIV CLDDDGDNGV VSSSDDGCVS FTELTQADET
201: ELLKPKISPE DTVAMPYSSG TTGLPKGVMI THKGLVTSIA QKVDGENPNL NFTANDVILC FLPMFHIYAL DALMLSAMRT GAALLIVPRF ELNLVMELIQ
301: RYKVTVVPVA PPVVLAFIKS PETERYDLSS VRIMLSGAAT LKKELEDAVR LKFPNAIFGQ GYGMTESGTV AKSLAFAKNP FKTKSGACGT VIRNAEMKVV
401: DTETGISLPR NKSGEICVRG HQLMKGYLND PEATARTIDK DGWLHTGDIG FVDDDDEIFI VDRLKELIKF KGYQVAPAEL EALLISHPSI DDAAVVAMKD
501: EVADEVPVAF VARSQGSQLT EDDVKSYVNK QVVHYKRIKM VFFIEVIPKA VSGKILRKDL RAKLETMCSK

Arabidopsis Description

4CL44-coumarate--CoA ligase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9LU36]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.