Factsheet for Bra013369.1-P

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid

Predictor Summary:

plastid 4
cytosol 1
peroxisome 4
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT4G19010.1	Thale cress	peroxisome, plastid	85.17	86.22
CDX99401	Canola	peroxisome	82.02	70.36
KRH74284	Soybean	peroxisome	57.24	59.31
PGSC0003DMT400024014	Potato	peroxisome	58.81	58.71
VIT_02s0109g00250.t01	Wine grape	peroxisome, plastid	58.29	58.49
Solyc08g076300.2.1	Tomato	peroxisome	58.46	58.36
GSMUA_Achr11P...	Banana	peroxisome, plasma membrane	34.55	58.24
GSMUA_Achr11P...	Banana	peroxisome	50.96	53.68
KXG38810	Sorghum	peroxisome	52.53	52.53
TraesCS1D01G200200.1	Wheat	peroxisome	51.66	52.11
Os10t0578950-00	Rice	peroxisome	50.44	51.79
TraesCS1A01G196700.1	Wheat	peroxisome	51.13	51.58
TraesCS1B01G211300.1	Wheat	peroxisome	51.83	50.6
Os08t0143300-00	Rice	peroxisome, plastid	52.01	50.42
KRH39635	Soybean	cytosol, golgi, peroxisome	43.46	50.0
Zm00001d030132_P002	Maize	peroxisome	52.36	47.17
HORVU1Hr1G051190.2	Barley	peroxisome	51.66	46.54
Bra012233.1-P	Field mustard	plastid	38.74	40.96
Bra025822.1-P	Field mustard	peroxisome	38.57	40.7
Bra016463.1-P	Field mustard	plastid	39.09	40.51
Bra016466.1-P	Field mustard	peroxisome	38.57	40.33
Bra029561.1-P	Field mustard	peroxisome	37.87	40.04
Bra012232.1-P	Field mustard	peroxisome, plastid	37.7	39.34
Bra029229.1-P	Field mustard	peroxisome	38.05	39.0
Bra016464.1-P	Field mustard	plastid	37.87	38.68
Bra016465.1-P	Field mustard	plastid	32.29	37.68
Bra030429.1-P	Field mustard	peroxisome	35.08	36.41
Bra029560.1-P	Field mustard	peroxisome	33.86	36.33
Bra004109.1-P	Field mustard	peroxisome	34.73	35.79
Bra031266.1-P	Field mustard	peroxisome	34.21	35.51
Bra001819.1-P	Field mustard	peroxisome	34.9	34.84
Bra001820.1-P	Field mustard	peroxisome	34.73	34.02
Bra031263.1-P	Field mustard	peroxisome	32.81	34.0
Bra031265.1-P	Field mustard	peroxisome	33.16	33.99
Bra036646.1-P	Field mustard	peroxisome	32.81	12.71

Protein Annotations

Gene3D:3.30.300.30	Gene3D:3.40.50.12780	MapMan:35.1	InterPro:AMP-bd_C	InterPro:AMP-binding_CS	InterPro:AMP-dep_Synth/Lig
EnsemblPlantsGene:Bra013369	EnsemblPlants:Bra013369.1	EnsemblPlants:Bra013369.1-P	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005777	GO:GO:0006744	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016405	UniProt:M4DA59	PFAM:PF00501
PFAM:PF13193	ScanProsite:PS00455	PANTHER:PTHR24096	PANTHER:PTHR24096:SF261	SUPFAM:SSF56801	UniParc:UPI0002546450
SEG:seg	:	:	:	:	:

Description

AT4G19010 (E=5e-269) | 4-coumarate--CoA ligase family protein / 4-coumaroyl-CoA synthase family protein

Coordinates

chrA01:-:5238884..5241284

Molecular Weight (calculated)

62443.8 Da

IEP (calculated)

8.197

GRAVY (calculated)

0.109

Length

573 amino acids

Sequence
(BLAST)

001: MAATQLHISP NPKTPTPSPQ TPPPPWFSPD TGIYTSKHPS VHLPVDPHLD AASALFSHLH TVDDPSSAAF VDSLTGFSIS YSELQVMVES IAAAIHRDFG
101: VRQGDVVSLV LPNSLYFPLL FLSLISLGTV VTTMNPSSSL GEIKKQVREC NVALAFTSRE SVDKLASLGV VVIRVPESYD LDSVRVENPT FYSIIKGGLG
201: SVPKKPLVKQ DDVAAIMYSS GTTGASKGVM LTHRNLIASM ELFVRFEASQ YEYPGASNVY LAALPLCHIY GLSLFVMGLL SVGSTIVVMR RFDVSDVVDV
301: IERFKVTHFP VVPPMLMALT KKAKGVCGEA FRSLKQVSSG AAPLSRKFIE DFVGTLPHVD LIQGYGMTES TAVGTRGFNT QKLRKYSSVG LLAPNMQARV
401: VDWSSGSFLP PGNRGELWIQ GPGVMKGYLN NPEATEMTIV EKSWLRTGDI AYFDEDGYLF IVDRMKEIIK YKGFQIAPAD LEAVLVSHPL IIDAAVTAAP
501: NEECGEIPVA FVVRRQETTL SEQDVISYVA AQVAPYRKVR KVVMVSSIPK SPTGKILRKE LKRILTNCVS SRL

Best Arabidopsis Sequence Match ( AT4G19010.1 )
(BLAST)

001: MAATHLHIPP NPKTQTSHQN PPFWFSSKTG IYTSKFPSLH LPVDPNLDAV SALFSHKHHG DTALIDSLTG FSISHTELQI MVQSMAAGIY HVLGVRQGDV
101: VSLVLPNSVY FPMIFLSLIS LGAIVTTMNP SSSLGEIKKQ VSECSVGLAF TSTENVEKLS SLGVSVISVS ESYDFDSIRI ENPKFYSIMK ESFGFVPKPL
201: IKQDDVAAIM YSSGTTGASK GVLLTHRNLI ASMELFVRFE ASQYEYPGSS NVYLAALPLC HIYGLSLFVM GLLSLGSTIV VMKRFDASDV VNVIERFKIT
301: HFPVVPPMLM ALTKKAKGVC GEVFKSLKQV SSGAAPLSRK FIEDFLQTLP HVDLIQGYGM TESTAVGTRG FNSEKLSRYS SVGLLAPNMQ AKVVDWSSGS
401: FLPPGNRGEL WIQGPGVMKG YLNNPKATQM SIVEDSWLRT GDIAYFDEDG YLFIVDRIKE IIKYKGFQIA PADLEAVLVS HPLIIDAAVT AAPNEECGEI
501: PVAFVVRRQE TTLSEEDVIS YVASQVAPYR KVRKVVMVNS IPKSPTGKIL RKELKRILTN SVSSRL

Arabidopsis Description

4CLL64-coumarate--CoA ligase-like 6 [Source:UniProtKB/Swiss-Prot;Acc:Q84P24]
SUBAcon: [peroxisome,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.