Factsheet for Bra029561.1-P

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

plastid 2
vacuole 1
peroxisome 4
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY46375	Canola	peroxisome	98.52	98.52
CDY39155	Canola	peroxisome	97.05	97.05
AT4G05160.1	Thale cress	peroxisome	89.3	88.97
Bra029560.1-P	Field mustard	peroxisome	73.43	74.53
KRH25085	Soybean	peroxisome	40.96	72.79
PGSC0003DMT400020978	Potato	peroxisome	71.03	71.16
Solyc11g069050.1.1	Tomato	peroxisome	70.11	70.63
VIT_06s0061g00450.t01	Wine grape	peroxisome	69.19	68.93
HORVU4Hr1G072130.2	Barley	mitochondrion, peroxisome	28.6	67.98
KRH30593	Soybean	peroxisome	69.19	67.2
GSMUA_Achr5P19650_001	Banana	peroxisome	53.14	59.26
GSMUA_Achr8P14210_001	Banana	peroxisome	53.87	58.87
KXG40154	Sorghum	peroxisome	58.67	57.5
Zm00001d027711_P003	Maize	extracellular	57.93	56.58
Os03t0152400-01	Rice	plasma membrane	57.56	56.52
TraesCS4D01G268400.1	Wheat	peroxisome	56.83	56.31
TraesCS4B01G269200.1	Wheat	peroxisome	57.56	56.22
TraesCS4A01G036200.1	Wheat	peroxisome	56.83	56.1
Zm00001d033055_P001	Maize	peroxisome	56.46	55.64
OQU91476	Sorghum	peroxisome	55.9	54.4
Bra016466.1-P	Field mustard	peroxisome	42.99	42.52
Bra012232.1-P	Field mustard	peroxisome, plastid	42.8	42.26
Bra012233.1-P	Field mustard	plastid	41.7	41.7
Bra025822.1-P	Field mustard	peroxisome	41.7	41.62
Bra029229.1-P	Field mustard	peroxisome	42.62	41.32
Bra031266.1-P	Field mustard	peroxisome	41.88	41.12
Bra030429.1-P	Field mustard	peroxisome	41.7	40.94
Bra016463.1-P	Field mustard	plastid	41.7	40.87
Bra016465.1-P	Field mustard	plastid	36.16	39.92
Bra016464.1-P	Field mustard	plastid	41.14	39.75
Bra004109.1-P	Field mustard	peroxisome	40.77	39.75
Bra001819.1-P	Field mustard	peroxisome	41.7	39.37
Bra031263.1-P	Field mustard	peroxisome	40.04	39.24
Bra031265.1-P	Field mustard	peroxisome	39.3	38.1
Bra013369.1-P	Field mustard	peroxisome, plastid	40.04	37.87
Bra001820.1-P	Field mustard	peroxisome	40.77	37.78
HORVU4Hr1G072150.1	Barley	peroxisome	35.61	34.65
Bra036646.1-P	Field mustard	peroxisome	35.98	13.18

Protein Annotations

Gene3D:3.30.300.30	Gene3D:3.40.50.12780	MapMan:35.1	InterPro:AMP-bd_C	InterPro:AMP-binding_CS	InterPro:AMP-dep_Synth/Lig
EnsemblPlantsGene:Bra029561	EnsemblPlants:Bra029561.1	EnsemblPlants:Bra029561.1-P	GO:GO:0003674	GO:GO:0003824	GO:GO:0004321
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005777	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009695	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021
GO:GO:0016740	UniProt:M4EL94	PFAM:PF00501	PFAM:PF13193	ScanProsite:PS00455	PANTHER:PTHR24096
PANTHER:PTHR24096:SF302	SUPFAM:SSF56801	TMHMM:TMhelix	UniParc:UPI0002542610	SEG:seg	:

Description

AT4G05160 (E=2e-266) | 4-coumarate--CoA ligase, putative / 4-coumaroyl-CoA synthase, putative

Coordinates

chrA09:-:16989528..16991660

Molecular Weight (calculated)

59620.4 Da

IEP (calculated)

8.719

GRAVY (calculated)

-0.017

Length

542 amino acids

Sequence
(BLAST)

001: MEKSGYGRDG IYRSLRPPLV LPKDPNTSLV SFLFRNSSSS YPSKPSIIDS DSGVSLSFSD LKSSVARLAR GFLRLGIRQN DVVLIFAPNS YQFPLCFLAV
101: SAIGAVFTTA NPLYTTNEVS KQIKDSNPKL IISVQQLFDK VKDFNLPVVL LGSSNESLEP NSKILSFKNV MELSDQVSDL PVVEIKQTDT AALLYSSGTT
201: GISKGVELTH GNFIAASLMV TMDQDLMGEY HGVFLCFLPM FHVFGLAVIA YSQLQRGNAL VSMARFELEL LLKYIEKYRV TQLWVVPPVF LALAKQSVVK
301: KYDLSSLKYI GSGAAPLGKD LMEECGKNIP NVVLMQGYGM TETCGIVSVE DPRLGKRNSG SAGMLAPGIE AQIVSVESGK PQPPNQQGEI WVRGPNMMKG
401: YFNNPQATKE TIDRKGWVHT GDLGYFNEDG NLFVVDRLKE LIKYKGFQVA PAELEGLLVS HPEILDAVVI PLPDEEAGEV PIAFVVRSPS SSITEEDIQK
501: FIAKQVAPYK RLRRVSFIST VPKSAAGKIL RRELVQQVRS KM

Best Arabidopsis Sequence Match ( AT4G05160.1 )
(BLAST)

001: MEKSGYGRDG IYRSLRPTLV LPKDPNTSLV SFLFRNSSSY PSKLAIADSD TGDSLTFSQL KSAVARLAHG FHRLGIRKND VVLIFAPNSY QFPLCFLAVT
101: AIGGVFTTAN PLYTVNEVSK QIKDSNPKII ISVNQLFDKI KGFDLPVVLL GSKDTVEIPP GSNSKILSFD NVMELSEPVS EYPFVEIKQS DTAALLYSSG
201: TTGTSKGVEL THGNFIAASL MVTMDQDLMG EYHGVFLCFL PMFHVFGLAV ITYSQLQRGN ALVSMARFEL ELVLKNIEKF RVTHLWVVPP VFLALSKQSI
301: VKKFDLSSLK YIGSGAAPLG KDLMEECGRN IPNVLLMQGY GMTETCGIVS VEDPRLGKRN SGSAGMLAPG VEAQIVSVET GKSQPPNQQG EIWVRGPNMM
401: KGYLNNPQAT KETIDKKSWV HTGDLGYFNE DGNLYVVDRI KELIKYKGFQ VAPAELEGLL VSHPDILDAV VIPFPDEEAG EVPIAFVVRS PNSSITEQDI
501: QKFIAKQVAP YKRLRRVSFI SLVPKSAAGK ILRRELVQQV RSKM

Arabidopsis Description

4CLL74-coumarate--CoA ligase-like 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9M0X9]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.