Factsheet for Solyc11g069050.1.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

cytosol 1
vacuole 1
peroxisome 4
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400020978	Potato	peroxisome	94.24	93.72
KRH25085	Soybean	peroxisome	42.57	75.08
CDY39155	Canola	peroxisome	71.0	70.48
Bra029561.1-P	Field mustard	peroxisome	70.63	70.11
CDY46375	Canola	peroxisome	70.63	70.11
VIT_06s0061g00450.t01	Wine grape	peroxisome	69.7	68.93
AT4G05160.1	Thale cress	peroxisome	68.4	67.65
HORVU4Hr1G072130.2	Barley	mitochondrion, peroxisome	28.62	67.54
CDY46376	Canola	peroxisome	67.47	67.35
CDY39153	Canola	peroxisome	66.54	66.42
KRH22842	Soybean	peroxisome, plastid	66.54	66.3
KRH30593	Soybean	peroxisome	65.61	63.26
GSMUA_Achr5P19650_001	Banana	peroxisome	54.65	60.49
Bra029560.1-P	Field mustard	peroxisome	60.04	60.49
GSMUA_Achr8P14210_001	Banana	peroxisome	54.09	58.67
KXG40154	Sorghum	peroxisome	58.55	56.96
Os03t0152400-01	Rice	plasma membrane	58.18	56.7
Zm00001d027711_P003	Maize	extracellular	58.36	56.58
TraesCS4D01G268400.1	Wheat	peroxisome	56.69	55.76
TraesCS4A01G036200.1	Wheat	peroxisome	56.88	55.74
TraesCS4B01G269200.1	Wheat	peroxisome	57.06	55.32
Zm00001d033055_P001	Maize	peroxisome	55.95	54.73
OQU91476	Sorghum	peroxisome	55.58	53.68
Solyc12g094520.1.1	Tomato	plastid	43.31	42.29
Solyc06g068650.2.1	Tomato	peroxisome	40.52	40.15
Solyc03g117870.2.1	Tomato	plastid	40.52	40.0
Solyc08g076300.2.1	Tomato	peroxisome	41.82	39.2
Solyc03g111170.2.1	Tomato	nucleus	40.15	39.13
Solyc11g007970.1.1	Tomato	peroxisome	39.78	37.88
Solyc03g097030.2.1	Tomato	peroxisome	39.96	37.72
Solyc07g008360.1.1	Tomato	peroxisome	39.22	37.15
Solyc12g042460.1.1	Tomato	peroxisome	37.73	37.04
Solyc02g088710.2.1	Tomato	peroxisome	36.06	35.08
HORVU4Hr1G072150.1	Barley	peroxisome	34.57	33.39

Protein Annotations

Gene3D:3.30.300.30	Gene3D:3.40.50.12780	MapMan:35.1	InterPro:AMP-bd_C	InterPro:AMP-binding_CS	InterPro:AMP-dep_Synth/Lig
GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0008150	GO:GO:0008152	GO:GO:0016020
GO:GO:0016021	UniProt:K4DA61	PFAM:PF00501	PFAM:PF13193	ScanProsite:PS00455	PANTHER:PTHR24096
PANTHER:PTHR24096:SF302	SUPFAM:SSF56801	EnsemblPlantsGene:Solyc11g069050.1	EnsemblPlants:Solyc11g069050.1.1	TMHMM:TMhelix	UniParc:UPI000276A7A4
SEG:seg	:	:	:	:	:

Description

4-coumarate--CoA ligase-like 7 [Source:Projected from Arabidopsis thaliana (AT4G05160) UniProtKB/Swiss-Prot;Acc:Q9M0X9]

Coordinates

chr11:+:53626572..53633178

Molecular Weight (calculated)

58933.9 Da

IEP (calculated)

8.512

GRAVY (calculated)

0.070

Length

538 amino acids

Sequence
(BLAST)

001: MEKSGYGRDG VYRSLRPPVF YPKDENLSMV SFLFRKISSY PEKPAFFDAD NGGTLSFSQF KSMVSRISHG LIHQMGIKKN DVVLIFAPNS VQFPLSFFGV
101: IAIGAIATTV NPMYTVAELS KQIKDCKPSL IITSPELFDK VNSFNLPILL LGNSNSNNAG VVRFTELVDK AGCFDLDKTV VKQTDTAVLL YSSGTTGVSK
201: GVVLTHRNFI SAALMVSSDQ DLAGEMHNVY MCVLPMFHVF GLAVIMYSQL QRGNAIVSMA KFDLETLLKN IDKYRVSHLW IVPPIVLALA KNPVVKKYDL
301: TSIKQIGSGA APLGKDLMED CAKNFPQAVV MQGYGMTETC GIVSVENMCV GPRHTGSAGS LAPGIEAQIV SVDKSKPLPP GQLGEIWVRG PNMMKGYFNN
401: PQATMLTIDN QGWVHTGDLG YFTEDGLLYV VDRIKELIKY KGFQVAPAEL EGLLVSHPEI LDAVVIPFPD AEAGEVPVAY VVRSPNSSLT EEDVQKFIAD
501: QVAPFKRLKK VTFINSVPKS ASGKILRREL IDKVRSKI

Best Arabidopsis Sequence Match ( AT4G05160.1 )
(BLAST)

001: MEKSGYGRDG IYRSLRPTLV LPKDPNTSLV SFLFRNSSSY PSKLAIADSD TGDSLTFSQL KSAVARLAHG FHRLGIRKND VVLIFAPNSY QFPLCFLAVT
101: AIGGVFTTAN PLYTVNEVSK QIKDSNPKII ISVNQLFDKI KGFDLPVVLL GSKDTVEIPP GSNSKILSFD NVMELSEPVS EYPFVEIKQS DTAALLYSSG
201: TTGTSKGVEL THGNFIAASL MVTMDQDLMG EYHGVFLCFL PMFHVFGLAV ITYSQLQRGN ALVSMARFEL ELVLKNIEKF RVTHLWVVPP VFLALSKQSI
301: VKKFDLSSLK YIGSGAAPLG KDLMEECGRN IPNVLLMQGY GMTETCGIVS VEDPRLGKRN SGSAGMLAPG VEAQIVSVET GKSQPPNQQG EIWVRGPNMM
401: KGYLNNPQAT KETIDKKSWV HTGDLGYFNE DGNLYVVDRI KELIKYKGFQ VAPAELEGLL VSHPDILDAV VIPFPDEEAG EVPIAFVVRS PNSSITEQDI
501: QKFIAKQVAP YKRLRRVSFI SLVPKSAAGK ILRRELVQQV RSKM

Arabidopsis Description

4CLL74-coumarate--CoA ligase-like 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9M0X9]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.