CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

cytosol 1
extracellular 1
peroxisome 4
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d027711_P003	Maize	extracellular	96.02	95.68
HORVU4Hr1G072130.2	Barley	mitochondrion, peroxisome	34.36	83.33
TraesCS4A01G036200.1	Wheat	peroxisome	80.65	81.24
TraesCS4D01G268400.1	Wheat	peroxisome	80.11	80.99
Os03t0152400-01	Rice	plasma membrane	80.65	80.8
TraesCS4B01G269200.1	Wheat	peroxisome	80.47	80.18
OQU91476	Sorghum	peroxisome	78.12	77.56
KRH25085	Soybean	peroxisome	37.97	68.85
GSMUA_Achr5P19650_001	Banana	peroxisome	59.67	67.9
GSMUA_Achr8P14210_001	Banana	peroxisome	60.22	67.14
VIT_08s0007g05050.t01	Wine grape	plastid	58.95	61.51
VIT_06s0061g00450.t01	Wine grape	peroxisome	59.13	60.11
AT4G05160.1	Thale cress	peroxisome	58.41	59.38
KRH22842	Soybean	peroxisome, plastid	57.69	59.07
CDY39155	Canola	peroxisome	57.69	58.86
PGSC0003DMT400020978	Potato	peroxisome	57.5	58.78
Bra029561.1-P	Field mustard	peroxisome	57.5	58.67
Solyc11g069050.1.1	Tomato	peroxisome	56.96	58.55
CDY46375	Canola	peroxisome	57.32	58.49
KRH30593	Soybean	peroxisome	58.77	58.24
CDY46376	Canola	peroxisome	56.6	58.07
CDY39153	Canola	peroxisome	55.52	56.96
Bra029560.1-P	Field mustard	peroxisome	49.19	50.94
HORVU4Hr1G072150.1	Barley	peroxisome	43.4	43.09
EER95569	Sorghum	peroxisome	42.31	42.31
EES01913	Sorghum	peroxisome, plastid	41.23	41.08
EES05680	Sorghum	peroxisome	41.23	40.28
EES15085	Sorghum	peroxisome	39.6	39.67
EER90150	Sorghum	peroxisome	39.6	39.32
KXG38810	Sorghum	peroxisome	39.96	38.57
EER98656	Sorghum	peroxisome, plastid	38.34	38.2
EES13602	Sorghum	peroxisome	39.24	38.0
EES04623	Sorghum	peroxisome	37.97	37.84
EER97853	Sorghum	peroxisome, plastid	37.07	37.07
EER99996	Sorghum	plastid	38.16	34.88
KXG38162	Sorghum	peroxisome	35.08	34.46
OQU88316	Sorghum	peroxisome, plastid	36.53	33.78
KXG26308	Sorghum	peroxisome	23.15	23.49

Protein Annotations

Gene3D:3.30.300.30	Gene3D:3.40.50.12780	MapMan:35.1	UniProt:A0A1B6QQG1	InterPro:AMP-bd_C	InterPro:AMP-binding_CS
InterPro:AMP-dep_Synth/Lig	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0008150	GO:GO:0008152
GO:GO:0016020	GO:GO:0016021	EnsemblPlants:KXG40154	ProteinID:KXG40154	ProteinID:KXG40154.1	ProteinID:OQU93216.1
PFAM:PF00501	PFAM:PF13193	ScanProsite:PS00455	PANTHER:PTHR24096	PANTHER:PTHR24096:SF305	EnsemblPlantsGene:SORBI_3001G500800
SUPFAM:SSF56801	TMHMM:TMhelix	UniParc:UPI0001C80A9E	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr1:+:77006837..77012883

Molecular Weight (calculated)

59426.1 Da

IEP (calculated)

8.357

GRAVY (calculated)

0.182

Length

553 amino acids

Sequence
(BLAST)

001: MARTTAPAAG YGADGVYRSP RPAVRIESDP GLSLNDLLFR RADACPSALA LVDSATGQSL TFAAFRSAVL TTAVALSSRA GVRRGDVVLF FAPNCFLYPV
101: CFFAVTALGA VATTANPLYT PREVAKQATD SRAKLAITVS ELLPKIVDLR LPTILLDVDG GAASVTASKP QGASVTLYSD LISGVRETEY RRPPTKQSDT
201: AALLYSSGTT GASKGVILTH RNFISAAAMM TADQDELGEG PNVFLCFLPM FHIFGLSVLT FAQMQRGNSV VVMSRFDMDS VMAAVQRHRV THLFCVPPVM
301: IALAKLGSVG KYDLSSLRFI GSGAAPLGKD VMEGVAKNFP EAVIAQGYGM TETCGIISLE YPEKGQVRQF GSTGALVSGV EAKIVDVETL KCLPPNQLGE
401: ICVRGLNIMQ GYFNNVQATE FTIKQGWLHT GDIGYFDEGG QLFVVDRLKE LIKYKGFQIA PAELEGLLLS HPEILDAVVI PFPDAEAGEV PIAYVVRSPV
501: SSLTEVDVQK FIEKQVAYYK KLRRVTFVDS VPKSASGKIL RRELIAKVRS SKL

Best Arabidopsis Sequence Match ( AT4G05160.1 )
(BLAST)

001: MEKSGYGRDG IYRSLRPTLV LPKDPNTSLV SFLFRNSSSY PSKLAIADSD TGDSLTFSQL KSAVARLAHG FHRLGIRKND VVLIFAPNSY QFPLCFLAVT
101: AIGGVFTTAN PLYTVNEVSK QIKDSNPKII ISVNQLFDKI KGFDLPVVLL GSKDTVEIPP GSNSKILSFD NVMELSEPVS EYPFVEIKQS DTAALLYSSG
201: TTGTSKGVEL THGNFIAASL MVTMDQDLMG EYHGVFLCFL PMFHVFGLAV ITYSQLQRGN ALVSMARFEL ELVLKNIEKF RVTHLWVVPP VFLALSKQSI
301: VKKFDLSSLK YIGSGAAPLG KDLMEECGRN IPNVLLMQGY GMTETCGIVS VEDPRLGKRN SGSAGMLAPG VEAQIVSVET GKSQPPNQQG EIWVRGPNMM
401: KGYLNNPQAT KETIDKKSWV HTGDLGYFNE DGNLYVVDRI KELIKYKGFQ VAPAELEGLL VSHPDILDAV VIPFPDEEAG EVPIAFVVRS PNSSITEQDI
501: QKFIAKQVAP YKRLRRVSFI SLVPKSAAGK ILRRELVQQV RSKM

Arabidopsis Description

4CLL74-coumarate--CoA ligase-like 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9M0X9]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.