Factsheet for TraesCS4A01G036200.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

plastid 2
peroxisome 3
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	peroxisome, plasma membrane, plastid
iPSORT:	plastid
MultiLoc:	peroxisome
PProwler:	peroxisome
TargetP:	plastid
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G268400.1	Wheat	peroxisome	97.09	97.44
TraesCS4B01G269200.1	Wheat	peroxisome	96.36	95.32
HORVU4Hr1G072130.2	Barley	mitochondrion, peroxisome	37.7	90.79
Os03t0152400-01	Rice	plasma membrane	81.24	80.8
KXG40154	Sorghum	peroxisome	81.24	80.65
Zm00001d027711_P003	Maize	extracellular	79.6	78.74
OQU91476	Sorghum	peroxisome	78.87	77.74
Zm00001d033055_P001	Maize	peroxisome	77.41	77.27
KRH25085	Soybean	peroxisome	38.07	68.52
GSMUA_Achr8P14210_001	Banana	peroxisome	60.11	66.53
GSMUA_Achr5P19650_001	Banana	peroxisome	57.38	64.81
KRH22842	Soybean	peroxisome, plastid	57.19	58.15
VIT_06s0061g00450.t01	Wine grape	peroxisome	57.56	58.09
VIT_08s0007g05050.t01	Wine grape	plastid	55.56	57.55
KRH30593	Soybean	peroxisome	58.29	57.35
PGSC0003DMT400020978	Potato	peroxisome	56.47	57.3
CDY46375	Canola	peroxisome	56.28	57.01
Solyc11g069050.1.1	Tomato	peroxisome	55.74	56.88
CDY39155	Canola	peroxisome	56.1	56.83
Bra029561.1-P	Field mustard	peroxisome	56.1	56.83
AT4G05160.1	Thale cress	peroxisome	56.28	56.8
CDY46376	Canola	peroxisome	55.56	56.59
CDY39153	Canola	peroxisome	54.64	55.66
Bra029560.1-P	Field mustard	peroxisome	47.91	49.25
HORVU4Hr1G072150.1	Barley	peroxisome	49.18	48.47
TraesCS5A01G498800.1	Wheat	peroxisome	44.08	43.84
TraesCS2A01G145800.1	Wheat	peroxisome	42.08	42.62
TraesCS6A01G266700.1	Wheat	peroxisome	43.72	41.88
TraesCS3A01G394200.1	Wheat	peroxisome, plastid	42.08	41.4
TraesCS6A01G151700.1	Wheat	peroxisome	40.44	40.66
TraesCS7A01G496200.1	Wheat	peroxisome	40.98	40.4
TraesCS3A01G394300.1	Wheat	peroxisome	41.17	40.36
TraesCS1A01G196700.1	Wheat	peroxisome	40.98	39.61
TraesCS4A01G239000.1	Wheat	peroxisome	39.53	39.38
TraesCS3A01G472200.1	Wheat	peroxisome	39.16	39.09
TraesCS4A01G239100.2	Wheat	plastid	35.52	35.91
TraesCS2A01G272900.1	Wheat	plastid	39.16	34.68
TraesCS4A01G238800.1	Wheat	plastid	24.04	30.56

Protein Annotations

Gene3D:3.30.300.30	Gene3D:3.40.50.12780	MapMan:35.1	InterPro:AMP-bd_C	InterPro:AMP-binding_CS	InterPro:AMP-dep_Synth/Lig
ncoils:Coil	GO:GO:0003674	GO:GO:0003824	GO:GO:0004321	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005777	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009695	GO:GO:0009987	GO:GO:0016740	PFAM:PF00501	PFAM:PF13193	ScanProsite:PS00455
PANTHER:PTHR24096	PANTHER:PTHR24096:SF305	SUPFAM:SSF56801	EnsemblPlantsGene:TraesCS4A01G036200	EnsemblPlants:TraesCS4A01G036200.1	TIGR:cd05904
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr4A:-:29023189..29027701

Molecular Weight (calculated)

58534.8 Da

IEP (calculated)

6.848

GRAVY (calculated)

0.154

Length

549 amino acids

Sequence
(BLAST)

001: MATTTAAAPA AGYGADGVYR SLRPPARIPS DPGLSVADLL LRRADACPDA PALIDAATGR ALTFAGLRSA VLTTAVALAS RAGVRPGDAV LLLAPNCVLY
101: PVCFFAVTAA GAVASTANPL YTPREIAKQA SDARAKLVVT VAELLPKVAA LRLPVILLDD AAPPATADVT VTLYSDLVSG ADESAYRRPP TKQGDTAGLL
201: YSSGTTGESK GVVLTHRNFI AAATMVTSDQ DERGEPPNVF LCFLPMFHIF GLSVLTFAQL QRGNAVVVMS GFAMDSVMRA VQQHRVTHVF CVPPVMIALA
301: KHGRAGKHDL SSLRFIGSGA APLGRDVMEA VARNFPDAEI VQGYGMTETC GIISLEYPEK GQARQFGSTG TLVVGVEAKV VDVETQKHLP PSQLGEICIR
401: GPQIMEGYFN NVEATDFTIK QGWLHTGDLG YFDDEGQLFV VDRLKELIKY KGFQIAPAEL EGLLLSHPEI LDAVVIPFPD DEAGEVPIAY VVRSPASSLT
501: EVDVQKFIAK QVTHYKRLRR VTFVESVPKS AAGKILRREL IAQVRSSKL

Best Arabidopsis Sequence Match ( AT4G05160.1 )
(BLAST)

001: MEKSGYGRDG IYRSLRPTLV LPKDPNTSLV SFLFRNSSSY PSKLAIADSD TGDSLTFSQL KSAVARLAHG FHRLGIRKND VVLIFAPNSY QFPLCFLAVT
101: AIGGVFTTAN PLYTVNEVSK QIKDSNPKII ISVNQLFDKI KGFDLPVVLL GSKDTVEIPP GSNSKILSFD NVMELSEPVS EYPFVEIKQS DTAALLYSSG
201: TTGTSKGVEL THGNFIAASL MVTMDQDLMG EYHGVFLCFL PMFHVFGLAV ITYSQLQRGN ALVSMARFEL ELVLKNIEKF RVTHLWVVPP VFLALSKQSI
301: VKKFDLSSLK YIGSGAAPLG KDLMEECGRN IPNVLLMQGY GMTETCGIVS VEDPRLGKRN SGSAGMLAPG VEAQIVSVET GKSQPPNQQG EIWVRGPNMM
401: KGYLNNPQAT KETIDKKSWV HTGDLGYFNE DGNLYVVDRI KELIKYKGFQ VAPAELEGLL VSHPDILDAV VIPFPDEEAG EVPIAFVVRS PNSSITEQDI
501: QKFIAKQVAP YKRLRRVSFI SLVPKSAAGK ILRRELVQQV RSKM

Arabidopsis Description

4CLL74-coumarate--CoA ligase-like 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9M0X9]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.