Factsheet for TraesCS6A01G266700.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

peroxisome 2
mitochondrion 1
extracellular 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	extracellular, peroxisome
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	extracellular
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G294100.1	Wheat	peroxisome	97.91	97.91
TraesCS6D01G248000.1	Wheat	peroxisome, plasma membrane	97.03	97.89
HORVU0Hr1G018190.2	Barley	peroxisome	94.24	94.9
Os02t0697400-01	Rice	plasma membrane	86.39	86.99
EES05680	Sorghum	peroxisome	84.47	85.51
GSMUA_Achr11P...	Banana	peroxisome, plastid	68.24	73.36
Zm00001d051529_P001	Maize	peroxisome, plasma membrane	79.41	71.77
GSMUA_Achr2P18040_001	Banana	peroxisome, plastid	67.19	71.56
VIT_16s0039g02040.t01	Wine grape	peroxisome	68.06	71.17
KRH77759	Soybean	peroxisome	64.05	66.13
AT1G65060.1	Thale cress	peroxisome	64.57	65.95
Bra004109.1-P	Field mustard	peroxisome	63.87	65.83
CDY07442	Canola	peroxisome	63.87	65.83
CDY39293	Canola	peroxisome	63.53	65.35
PGSC0003DMT400008182	Potato	peroxisome	63.87	64.32
Solyc03g097030.2.1	Tomato	peroxisome	63.7	64.04
KRH29003	Soybean	plastid	63.0	64.01
KRH27719	Soybean	peroxisome	58.64	62.34
TraesCS2A01G145800.1	Wheat	peroxisome	58.12	61.44
TraesCS7A01G496200.1	Wheat	peroxisome	59.69	61.4
TraesCS6A01G151700.1	Wheat	peroxisome	58.46	61.36
TraesCS4A01G036200.1	Wheat	peroxisome	41.88	43.72
TraesCS5A01G498800.1	Wheat	peroxisome	36.13	37.5
TraesCS4A01G239100.2	Wheat	plastid	33.51	35.36
TraesCS3A01G394200.1	Wheat	peroxisome, plastid	33.51	34.41
TraesCS3A01G394300.1	Wheat	peroxisome	32.98	33.75
TraesCS1A01G196700.1	Wheat	peroxisome	32.98	33.27
TraesCS2A01G272900.1	Wheat	plastid	35.78	33.06
TraesCS4A01G239000.1	Wheat	peroxisome	31.59	32.85
TraesCS3A01G472200.1	Wheat	peroxisome	31.41	32.73
TraesCS4A01G238800.1	Wheat	plastid	20.07	26.62

Protein Annotations

EnsemblPlants:TraesCS6A01G266700.1	EnsemblPlantsGene:TraesCS6A01G266700	Gene3D:3.30.300.30	Gene3D:3.40.50.12780	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	InterPro:AMP-bd_C	InterPro:AMP-binding_CS	InterPro:AMP-dep_Synth/Lig	PANTHER:PTHR24096
PANTHER:PTHR24096:SF169	PFAM:PF00501	PFAM:PF13193	ScanProsite:PS00455	SEG:seg	SUPFAM:SSF56801
TIGR:cd05904	MapMan:7.8.1.1	MapMan:9.2.1.3	:	:	:

Description

No Description!

Coordinates

chr6A:-:492283190..492286151

Molecular Weight (calculated)

60630.3 Da

IEP (calculated)

5.464

GRAVY (calculated)

0.234

Length

573 amino acids

Sequence
(BLAST)

001: MIKVAAPEVQ QPQAVAAAEA VSAVVPEATI FRSKLPDIDI PSHLPLHEYC FARAAELPDA PCLIAAATGR TYTFAETHAL CRKAAAALHR LGVGHGDRVM
101: ILLQNCVEFA VAFFGASFLG AVSTAANPFC TPQEIHKQLV ASGAKMIVTQ SAYVDKLRHE SFPRISTSGG DDTLTVITVD DEAATPDGCL PFWGVVGSAD
201: EGSVPEVSIS PDDAVALPYS SGTTGLPKGV VLTHGGLVSS VAQQVDGENP NLYMREGDVA LCVLPLFHIF SLNSVLLCAV RAGAAVMLMP KFEMGAMLAG
301: IERWRVTVAA VVPPLVLALA KNPVVEQHDL SSIRIVLSGA APLGKELQDA LRGRLPQAIF GQGYGMTEAG PVLSMCPAFA REPTPAKSGS CGTVVRNAEL
401: KVVDPDTGLS LGRNLPGEIC IRGPQIMKGY LNDPVATAAT IDVEGWLHTG DVGYVDDDDE VFIVDRVKEL IKFKGFQVPP AELEALLIAH PSIADAAVVP
501: QKDDAAGEVP VAFVVRAADS DIAEEAIKEF VSKQVVFYKR LHKVYFTHAI PKSASGKILR KELRAKLVSP VTA

Best Arabidopsis Sequence Match ( AT1G65060.1 )
(BLAST)

001: MITAALHEPQ IHKPTDTSVV SDDVLPHSPP TPRIFRSKLP DIDIPNHLPL HTYCFEKLSS VSDKPCLIVG STGKSYTYGE THLICRRVAS GLYKLGIRKG
101: DVIMILLQNS AEFVFSFMGA SMIGAVSTTA NPFYTSQELY KQLKSSGAKL IITHSQYVDK LKNLGENLTL ITTDEPTPEN CLPFSTLITD DETNPFQETV
201: DIGGDDAAAL PFSSGTTGLP KGVVLTHKSL ITSVAQQVDG DNPNLYLKSN DVILCVLPLF HIYSLNSVLL NSLRSGATVL LMHKFEIGAL LDLIQRHRVT
301: IAALVPPLVI ALAKNPTVNS YDLSSVRFVL SGAAPLGKEL QDSLRRRLPQ AILGQGYGMT EAGPVLSMSL GFAKEPIPTK SGSCGTVVRN AELKVVHLET
401: RLSLGYNQPG EICIRGQQIM KEYLNDPEAT SATIDEEGWL HTGDIGYVDE DDEIFIVDRL KEVIKFKGFQ VPPAELESLL INHHSIADAA VVPQNDEVAG
501: EVPVAFVVRS NGNDITEEDV KEYVAKQVVF YKRLHKVFFV ASIPKSPSGK ILRKDLKAKL C

Arabidopsis Description

4CL34-coumarate--CoA ligase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9S777]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.