Factsheet for TraesCS4A01G238800.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, peroxisome, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	peroxisome
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G074700.1	Wheat	peroxisome	88.19	69.78
TraesCS4B01G076100.1	Wheat	peroxisome	83.8	66.67
HORVU4Hr1G012660.1	Barley	peroxisome	82.41	65.8
TraesCS4A01G239000.1	Wheat	peroxisome	76.85	60.25
TraesCS3A01G472200.1	Wheat	peroxisome	72.92	57.27
Os07t0280200-01	Rice	peroxisome	63.19	48.92
Zm00001d019957_P002	Maize	peroxisome	64.12	48.68
EER98656	Sorghum	peroxisome, plastid	62.27	48.47
GSMUA_Achr1P13470_001	Banana	peroxisome	47.22	39.53
TraesCS4A01G239100.2	Wheat	plastid	44.91	35.73
KRH57649	Soybean	plastid	22.45	34.64
TraesCS3A01G394300.1	Wheat	peroxisome	43.52	33.57
Solyc03g111170.2.1	Tomato	nucleus	42.82	33.51
PGSC0003DMT400039281	Potato	peroxisome	42.59	33.33
TraesCS3A01G394200.1	Wheat	peroxisome, plastid	42.82	33.15
KRG94321	Soybean	cytosol, golgi, peroxisome	24.07	33.02
VIT_17s0000g01790.t01	Wine grape	peroxisome, plastid	40.51	31.82
VIT_14s0171g00300.t01	Wine grape	peroxisome	39.12	31.12
AT5G63380.1	Thale cress	peroxisome	40.05	30.78
Bra029229.1-P	Field mustard	peroxisome	39.58	30.59
KRH63739	Soybean	peroxisome, plastid	40.74	30.34
KRH54211	Soybean	peroxisome	41.2	29.82
KRG94318	Soybean	peroxisome, plastid	36.81	29.39
KRH57646	Soybean	peroxisome, plastid	37.04	28.99
CDY45730	Canola	vacuole	30.79	28.98
CDY71478	Canola	vacuole	30.56	28.76
VIT_14s0171g00290.t01	Wine grape	peroxisome	35.42	28.28
VIT_01s0010g02740.t01	Wine grape	peroxisome, plastid	35.88	28.18
TraesCS5A01G498800.1	Wheat	peroxisome	33.56	26.27
TraesCS1A01G196700.1	Wheat	peroxisome	32.41	24.65
TraesCS4A01G036200.1	Wheat	peroxisome	30.56	24.04
TraesCS6A01G151700.1	Wheat	peroxisome	26.62	21.06
TraesCS2A01G272900.1	Wheat	plastid	29.17	20.32
TraesCS7A01G496200.1	Wheat	peroxisome	26.16	20.29
TraesCS2A01G145800.1	Wheat	peroxisome	25.23	20.11
TraesCS6A01G266700.1	Wheat	peroxisome	26.62	20.07
CDY45731	Canola	peroxisome	2.08	5.84

Protein Annotations

EnsemblPlants:TraesCS4A01G238800.1	EnsemblPlantsGene:TraesCS4A01G238800	Gene3D:3.40.50.12780	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	InterPro:AMP-binding_CS	InterPro:AMP-dep_Synth/Lig	PANTHER:PTHR24096	PANTHER:PTHR24096:SF269	PFAM:PF00501
ScanProsite:PS00455	SEG:seg	SUPFAM:SSF56801	MapMan:35.1	:	:

Description

No Description!

Coordinates

chr4A:+:548053473..548056171

Molecular Weight (calculated)

45507.2 Da

IEP (calculated)

10.509

GRAVY (calculated)

0.141

Length

432 amino acids

Sequence
(BLAST)

001: MSNAHGGAMD ARSGYCATTK SFRSLRPPLP LPPADAPLTF PSFALSLLPS PLPAHPALLD AATGEAVSYP AFLSQVRALA AALRSRALPL PLGHGDVAFV
101: LAPSRLDVPV LYLALLAVGV AVSPANPALT AGELSRLVSL SGASVAFAVS STAAKLPAGL PTVLLDSPRF RSLLRHNEDR GENESAPPLD AGAVHQSATA
201: AIQYSSGTSG RVKAVALSHQ SLIAMAAGLH AQHVRSRKGV ERNLMSAPMF HSMGFSSVLN GLAQGRTMVV MTDAAARAGL RGMLEAAERW EVTEITAAPP
301: MVLAITRDRY RLKSLVRVVC GGAPLPTPVA EQFRRRFPHV DLRTGYGSTE AGAVSLMVDR DECSHLGSAG RINHNVEAKI VDIVTGEPLS VGQKGELCLS
401: VGHRRALVRR AEGTCRRSIL FFFRLSLVNS HT

Best Arabidopsis Sequence Match ( AT1G20480.1 )
(BLAST)

001: MAVKHGVDGD GSEIESRTLA VDRKSGFCES TSIFYSKREP MALPPNQFLD VTSFIASQPH RGKTVFVDAV TGRRLSFPEL WLGVERVAGC LYALGVRKGN
101: VVIILSPNSI LFPIVSLSVM SLGAIITTAN PINTSDEISK QIGDSRPVLA FTTCKLVSKL AAASNFNLPV VLMDDYHVPS QSYGDRVKLV GRLETMIETE
201: PSESRVKQRV NQDDTAALLY SSGTTGTSKG VMLSHRNLIA LVQAYRARFG LEQRTICTIP MCHIFGFGGF ATGLIALGWT IVVLPKFDMA KLLSAVETHR
301: SSYLSLVPPI VVAMVNGANE INSKYDLSSL HTVVAGGAPL SREVTEKFVE NYPKVKILQG YGLTESTAIA ASMFNKEETK RYGASGLLAP NVEGKIVDPD
401: TGRVLGVNQT GELWIRSPTV MKGYFKNKEA TASTIDSEGW LKTGDLCYID GDGFVFVVDR LKELIKCNGY QVAPAELEAL LLAHPEIADA AVIPIPDMKA
501: GQYPMAYIVR KVGSNLSESE IMGFVAKQVS PYKKIRKVTF LASIPKNPSG KILRRELTKL TTSKL

Arabidopsis Description

4CLL24-coumarate--CoA ligase-like 2 [Source:UniProtKB/Swiss-Prot;Acc:Q84P25]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.