Factsheet for HORVU4Hr1G012660.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

plastid 1
mitochondrion 2
peroxisome 2
endoplasmic reticulum 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	endoplasmic reticulum, mitochondrion, peroxisome, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	peroxisome
TargetP:	mitochondrion
WoLF PSORT:	endoplasmic reticulum
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G074700.1	Wheat	peroxisome	91.87	91.03
TraesCS4B01G076100.1	Wheat	peroxisome	90.2	89.87
TraesCS4A01G238800.1	Wheat	plastid	65.8	82.41
HORVU4Hr1G012680.8	Barley	peroxisome	83.18	80.79
HORVU3Hr1G100420.4	Barley	peroxisome, plastid	81.7	76.21
Os07t0280200-01	Rice	peroxisome	71.16	69.0
EER98656	Sorghum	peroxisome, plastid	69.5	67.75
Zm00001d019957_P002	Maize	peroxisome	70.79	67.31
CDY45731	Canola	peroxisome	18.85	66.23
GSMUA_Achr1P13470_001	Banana	peroxisome	52.5	55.04
VIT_17s0000g01790.t01	Wine grape	peroxisome, plastid	50.83	50.0
CDY71478	Canola	vacuole	42.14	49.67
CDY45730	Canola	vacuole	42.14	49.67
Solyc03g111170.2.1	Tomato	nucleus	50.65	49.64
PGSC0003DMT400039281	Potato	peroxisome	50.46	49.46
VIT_14s0171g00300.t01	Wine grape	peroxisome	49.17	48.99
HORVU4Hr1G072130.2	Barley	mitochondrion, peroxisome	20.52	48.68
HORVU3Hr1G089000.2	Barley	peroxisome, plastid	52.13	48.12
Bra029229.1-P	Field mustard	peroxisome	48.98	47.41
HORVU4Hr1G012630.3	Barley	peroxisome	49.91	47.04
KRH63739	Soybean	peroxisome, plastid	50.09	46.72
AT5G63380.1	Thale cress	peroxisome	48.24	46.44
VIT_14s0171g00290.t01	Wine grape	peroxisome	46.03	46.03
KRH54211	Soybean	peroxisome	50.09	45.39
KRG94318	Soybean	peroxisome, plastid	44.92	44.92
VIT_01s0010g02740.t01	Wine grape	peroxisome, plastid	44.73	44.0
KRH57646	Soybean	peroxisome, plastid	44.73	43.84
HORVU4Hr1G081940.3	Barley	peroxisome	40.67	40.0
HORVU2Hr1G066630.1	Barley	cytosol, mitochondrion, peroxisome, plastid	30.13	36.14
KRH57649	Soybean	plastid	18.11	35.0
KRG94321	Soybean	cytosol, golgi, peroxisome	19.04	32.7
HORVU6Hr1G030390.2	Barley	peroxisome	33.27	32.55
HORVU0Hr1G018190.2	Barley	peroxisome	34.2	32.51
HORVU1Hr1G051190.2	Barley	peroxisome	37.89	32.23
HORVU7Hr1G111130.3	Barley	peroxisome, plastid	33.46	30.68
HORVU4Hr1G072150.1	Barley	peroxisome	27.17	26.39
HORVU0Hr1G002720.3	Barley	mitochondrion, plastid	23.84	23.63

Protein Annotations

EnsemblPlants:HORVU4Hr1G012660.1	EnsemblPlantsGene:HORVU4Hr1G012660	Gene3D:3.30.300.30	Gene3D:3.40.50.12780	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	InterPro:AMP-bd_C	InterPro:AMP-binding_CS	InterPro:AMP-dep_Synth/Lig	PANTHER:PTHR24096
PANTHER:PTHR24096:SF269	PFAM:PF00501	PFAM:PF13193	ScanProsite:PS00455	SEG:seg	SUPFAM:SSF56801
UniParc:UPI000B4705B6	UniProt:A0A287N9H2	MapMan:35.1	:	:	:

Description

No Description!

Coordinates

chrchr4H:+:42423138..42465170

Molecular Weight (calculated)

57630.2 Da

IEP (calculated)

9.619

GRAVY (calculated)

0.138

Length

541 amino acids

Sequence
(BLAST)

001: MSRAIDARSG YCATTKSFRS LRPPLPQPLP PADVPLTFPA FALSLLPSPL PAHPALLDAA TGEAVSYPAF LSQARALAAA LRSRVLPLGR GDVAFVLAPS
101: RLDVPVLYFV LLAVGVAVSP ANPALTAGEV SRLVSLSGAS FAFAVSSTAA KLPAGLPTVL LDSPRFRSLL HYDQGGNEPD PLDAGSLRQS ATATIQYSSG
201: TSGQVKAVAL THRSLIAMAA GLHARHVKSS KGVERVLMSA PMFHSMGFAV VLNGLAQGRT VVVMTAAAAR AGLRGMLEAA ERWEVTEITA APPVLLGITK
301: ERYRLKSLAR VVCGGAPLPT SVAEQFRRRF PHVDLRTGYG STEAGAVSMM VDRDECSHVG SAGRINHNVE AKMVDIVTGK PLSVGQKGEL CLRGPSIMTG
401: YVGDEEANAA AFDSEGWLKT GDLCYIDQDG FLFVVDRLKE LIKYKAYQVA PVELELILQS LPEIVDAAVM PYPHEEAGEI PMALVVRQPG SKITEAQVME
501: HVAKQVAPYK KVRRVLFIDS IPRSPAGKIL RRQLSSHLSR L

Best Arabidopsis Sequence Match ( AT5G63380.1 )
(BLAST)

001: MLTKTNDSRL IDRSSGFDQR TGIYHSLRPS LSLPPIDQPL SAAEFALSLL LKSSPPATAG KNIEALTYLV NSSSGDNLTY GELLRRVRSL AVSLRERFPS
101: LASRNVAFIL SPSSLDIPVL YLALMSIGVV VSPANPIGSE SEVSHQVEVS EPVIAFATSQ TVKKLQSSSL PLGTVLMDST EFLSWLNRSD SSSVNPFQVQ
201: VNQSDPAAIL FSSGTTGRVK GVLLTHRNLI ASTAVSHQRT LQDPVNYDRV GLFSLPLFHV FGFMMMIRAI SLGETLVLLG RFELEAMFKA VEKYKVTGMP
301: VSPPLIVALV KSELTKKYDL RSLRSLGCGG APLGKDIAER FKQKFPDVDI VQGYGLTESS GPAASTFGPE EMVKYGSVGR ISENMEAKIV DPSTGESLPP
401: GKTGELWLRG PVIMKGYVGN EKASAETVDK EGWLKTGDLC YFDSEDFLYI VDRLKELIKY KAYQVPPVEL EQILHSNPDV IDAAVVPFPD EDAGEIPMAF
501: IVRKPGSNLN EAQIIDFVAK QVTPYKKVRR VAFINAIPKN PAGKILRREL TKIAVDGNAS KL

Arabidopsis Description

4CLL94-coumarate--CoA ligase-like 9 [Source:UniProtKB/Swiss-Prot;Acc:Q84P23]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.