Factsheet for HORVU4Hr1G081940.3

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

plastid 2
peroxisome 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	peroxisome, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	peroxisome
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4B01G326800.1	Wheat	peroxisome, plastid	96.73	96.38
TraesCS5A01G498800.1	Wheat	peroxisome	96.36	96.01
TraesCS4D01G323500.1	Wheat	plastid	96.18	96.01
Os03t0132000-01	Rice	plasma membrane	88.91	88.59
EER95569	Sorghum	peroxisome	88.73	88.25
Zm00001d027519_P001	Maize	plasma membrane	87.64	87.48
GSMUA_Achr8P13230_001	Banana	peroxisome	67.27	73.56
KRH17509	Soybean	peroxisome, plastid	64.91	65.03
PGSC0003DMT400075394	Potato	peroxisome, plastid	64.73	64.61
CDY33631	Canola	plastid	64.91	64.56
Solyc12g094520.1.1	Tomato	plastid	64.36	64.25
Bra016463.1-P	Field mustard	plastid	64.55	64.2
CDX96633	Canola	plastid	64.55	64.2
VIT_18s0001g00290.t01	Wine grape	peroxisome	63.09	63.21
AT1G20510.1	Thale cress	plastid	62.18	62.64
VIT_18s0001g00280.t01	Wine grape	peroxisome, plastid	58.91	59.02
Bra012233.1-P	Field mustard	plastid	57.45	58.3
CDY01369	Canola	plastid	57.45	58.2
CDY31883	Canola	plastid	57.09	57.83
AT1G20500.1	Thale cress	plastid	57.45	57.45
Bra012232.1-P	Field mustard	peroxisome, plastid	57.09	57.19
CDX96636	Canola	golgi, vacuole	39.82	57.18
CDY01370	Canola	peroxisome, plastid	57.09	57.09
CDY31472	Canola	peroxisome	53.09	56.81
CDY29527	Canola	peroxisome	54.73	56.79
CDX96637	Canola	plastid	56.55	56.24
CDY33628	Canola	plastid	56.36	56.16
Bra016464.1-P	Field mustard	plastid	56.91	55.79
Bra025822.1-P	Field mustard	peroxisome	54.91	55.62
AT1G20480.1	Thale cress	peroxisome	57.09	55.58
CDX96638	Canola	peroxisome	52.91	55.22
Bra016466.1-P	Field mustard	peroxisome	54.55	54.74
Bra016465.1-P	Field mustard	plastid	48.0	53.77
AT5G38120.1	Thale cress	plastid	52.36	52.36
CDY33627	Canola	peroxisome	52.73	52.06
CDY31474	Canola	peroxisome	54.73	51.9
HORVU4Hr1G072130.2	Barley	mitochondrion, peroxisome	21.09	50.88
CDY33629	Canola	golgi, vacuole	38.18	49.65
AT1G20490.2	Thale cress	peroxisome	39.64	48.77
HORVU3Hr1G089000.2	Barley	peroxisome, plastid	47.09	44.2
HORVU4Hr1G012680.8	Barley	peroxisome	42.18	41.65
HORVU4Hr1G012630.3	Barley	peroxisome	43.27	41.46
HORVU4Hr1G012660.1	Barley	peroxisome	40.0	40.67
HORVU1Hr1G051190.2	Barley	peroxisome	45.64	39.47
HORVU3Hr1G100420.4	Barley	peroxisome, plastid	40.73	38.62
HORVU2Hr1G066630.1	Barley	cytosol, mitochondrion, peroxisome, plastid	31.45	38.36
HORVU6Hr1G030390.2	Barley	peroxisome	36.0	35.8
HORVU0Hr1G018190.2	Barley	peroxisome	36.18	34.97
HORVU7Hr1G111130.3	Barley	peroxisome, plastid	36.91	34.41
HORVU4Hr1G072150.1	Barley	peroxisome	26.91	26.57
HORVU0Hr1G002720.3	Barley	mitochondrion, plastid	24.91	25.09

Protein Annotations

MapMan:11.7.1.7	Gene3D:3.30.300.30	Gene3D:3.40.50.12780	UniProt:A0A287PUV6	InterPro:AMP-bd_C	InterPro:AMP-binding_CS
InterPro:AMP-dep_Synth/Lig	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0008150	GO:GO:0008152
GO:GO:0016020	GO:GO:0016021	EnsemblPlantsGene:HORVU4Hr1G081940	EnsemblPlants:HORVU4Hr1G081940.3	PFAM:PF00501	PFAM:PF13193
ScanProsite:PS00455	PANTHER:PTHR24096	PANTHER:PTHR24096:SF186	SUPFAM:SSF56801	TMHMM:TMhelix	UniParc:UPI000B4691ED
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chrchr4H:-:620532425..620537092

Molecular Weight (calculated)

59258.9 Da

IEP (calculated)

8.981

GRAVY (calculated)

0.047

Length

550 amino acids

Sequence
(BLAST)

001: DPIAMATATA DPRSGYCAAT GAFRSKRAVV PLPADRDLDV VTFLASRRHS GVVALVDAST GRRTTFADLW RAVAGAATAL AAPPFGLRKG HVALILSPNS
101: VHFPVAALAA MSLGAVVTTA NPLNTAAEVA KQVADARPVL AFTTRDLLPK LPRGLRVVLL EPPSPADDPR IVATIDEISA TTPDPARRRD RVTQDDQATL
201: LYSSGTTGPS KGVVATHRNL ISMVQIVMNR FRLEDSDTTE TFLCTVPMFH VYGLVAFATG LLGCGATIVV LSKFELPEML RCITAYGVTY LPLVPPILVA
301: MVAHPKPLPL GNLRKVLSGG APLSKELIEG FRDKYPQVEI LQGYGLTEST AIGASTDSAE ESRRYGTAGL LSPNTEAKIV DPETGEALPV NRTGELWIRG
401: PYVMKGYFKN TEATQSTVTP DGWLKTGDLC YIDEDGYLFV VDRLKELIKY KGYQVPPAEL EALLLTHPEV SDVAVIPFPD REVGQFPMAY VVRKKGSNLS
501: AQEVMEFVAK QVAPYKKVRK VAFVTDIPKN ASGKILRKDL IKLATSKLPL

Best Arabidopsis Sequence Match ( AT1G20510.1 )
(BLAST)

001: MASVNSRSGF CNSNSTFYSK RTPIPLPPNP SLDVTTFISS QAHRGRIAFI DASTGQNLTF TELWRAVESV ADCLSEIGIR KGHVVLLLSP NSILFPVVCL
101: SVMSLGAIIT TTNPLNTSNE IAKQIKDSNP VLAFTTSQLL PKISAAAKKL PIVLMDEERV DSVGDVRRLV EMMKKEPSGN RVKERVDQDD TATLLYSSGT
201: TGMSKGVISS HRNLIAMVQT IVNRFGSDDG EQRFICTVPM FHIYGLAAFA TGLLAYGSTI IVLSKFEMHE MMSAIGKYQA TSLPLVPPIL VAMVNGADQI
301: KAKYDLSSMH TVLCGGAPLS KEVTEGFAEK YPTVKILQGY GLTESTGIGA STDTVEESRR YGTAGKLSAS MEGRIVDPVT GQILGPKQTG ELWLKGPSIM
401: KGYFSNEEAT SSTLDSEGWL RTGDLCYIDE DGFIFVVDRL KELIKYKGYQ VAPAELEALL LTHPEITDAA VIPFPDKEVG QFPMAYVVRK TGSSLSEKTI
501: MEFVAKQVAP YKRIRKVAFV SSIPKNPSGK ILRKDLIKIA TSNSKL

Arabidopsis Description

4CLL54-coumarate--CoA ligase-like 5 [Source:UniProtKB/Swiss-Prot;Acc:Q84P21]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.