Factsheet for Os03t0132000-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

cytosol 1
peroxisome 4
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, peroxisome, plasma membrane
BaCelLo:	cytosol
MultiLoc:	peroxisome
Plant-mPloc:	peroxisome
PProwler:	peroxisome
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

plasma membrane: 27800704

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER95569	Sorghum	peroxisome	90.04	89.87
Zm00001d027519_P001	Maize	plasma membrane	88.77	88.93
HORVU4Hr1G081940.3	Barley	peroxisome	88.59	88.91
TraesCS4B01G326800.1	Wheat	peroxisome, plastid	88.77	88.77
TraesCS4D01G323500.1	Wheat	plastid	88.41	88.57
TraesCS5A01G498800.1	Wheat	peroxisome	88.41	88.41
GSMUA_Achr8P13230_001	Banana	peroxisome	68.48	75.15
KRH17509	Soybean	peroxisome, plastid	63.77	64.12
Solyc12g094520.1.1	Tomato	plastid	63.95	64.07
PGSC0003DMT400075394	Potato	peroxisome, plastid	63.77	63.88
VIT_18s0001g00290.t01	Wine grape	peroxisome	63.41	63.75
CDY33631	Canola	plastid	62.86	62.75
AT1G20510.1	Thale cress	plastid	61.96	62.64
Bra016463.1-P	Field mustard	plastid	62.32	62.21
CDX96633	Canola	plastid	62.14	62.03
VIT_18s0001g00280.t01	Wine grape	peroxisome, plastid	58.51	58.83
Bra012233.1-P	Field mustard	plastid	56.34	57.38
CDY29527	Canola	peroxisome	55.07	57.36
CDY01369	Canola	plastid	56.34	57.27
CDY31472	Canola	peroxisome	53.08	57.0
CDY31883	Canola	plastid	55.98	56.91
AT1G20500.1	Thale cress	plastid	56.34	56.55
Bra025822.1-P	Field mustard	peroxisome	55.62	56.54
Bra012232.1-P	Field mustard	peroxisome, plastid	56.16	56.47
CDX96636	Canola	golgi, vacuole	39.13	56.4
CDY01370	Canola	peroxisome, plastid	56.16	56.36
CDX96637	Canola	plastid	56.16	56.06
CDY33628	Canola	plastid	55.98	55.98
AT1G20480.1	Thale cress	peroxisome	56.7	55.4
Bra016466.1-P	Field mustard	peroxisome	54.35	54.74
Bra016464.1-P	Field mustard	plastid	55.62	54.72
CDX96638	Canola	peroxisome	52.17	54.65
Bra016465.1-P	Field mustard	plastid	47.46	53.36
AT5G38120.1	Thale cress	plastid	51.45	51.64
CDY33627	Canola	peroxisome	51.99	51.53
CDY31474	Canola	peroxisome	53.08	50.52
CDY33629	Canola	golgi, vacuole	37.5	48.94
AT1G20490.2	Thale cress	peroxisome	38.41	47.43
Os10t0578950-00	Rice	peroxisome	42.93	42.47
Os03t0152400-01	Rice	plasma membrane	42.21	42.21
Os01t0901600-01	Rice	peroxisome, plastid	44.57	41.14
Os07t0280200-01	Rice	peroxisome	41.3	40.86
Os01t0901500-01	Rice	plastid	31.88	39.82
Os07t0639100-00	Rice	peroxisome	42.21	39.23
Os08t0143300-00	Rice	peroxisome, plastid	41.67	38.92
Os08t0448000-01	Rice	peroxisome	37.68	38.59
Os04t0310800-01	Rice	peroxisome	38.59	38.38
Os08t0245200-01	Rice	extracellular	38.22	37.41
Os02t0177600-01	Rice	plasma membrane	36.96	36.82
Os02t0697400-01	Rice	plasma membrane	37.32	36.2
Os06t0656500-01	Rice	peroxisome	36.59	36.14

Protein Annotations

MapMan:11.7.1.7	Gene3D:3.30.300.30	Gene3D:3.40.50.12780	EntrezGene:4331515	ProteinID:ABF93822.1	EMBL:AK105769
EMBL:AK121384	InterPro:AMP-bd_C	InterPro:AMP-binding_CS	InterPro:AMP-dep_Synth/Lig	ProteinID:BAF10781.1	ProteinID:BAS82148.1
ProteinID:EEE58280.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0008150	GO:GO:0008152	GO:GO:0016020	GO:GO:0016021	GO:GO:0016874
EnsemblPlantsGene:Os03g0132000	EnsemblPlants:Os03t0132000-01	PFAM:PF00501	PFAM:PF13193	ScanProsite:PS00455	PANTHER:PTHR24096
PANTHER:PTHR24096:SF186	UniProt:Q10S72	SUPFAM:SSF56801	TMHMM:TMhelix	UniParc:UPI0000DB4844	RefSeq:XP_015629747.1
SEG:seg	:	:	:	:	:

Description

acyl-CoA synthetase 4Similar to 4-coumarate-CoA ligase-like protein. (Os03t0132000-01)

Coordinates

chr3:+:1822255..1825976

Molecular Weight (calculated)

59868.7 Da

IEP (calculated)

9.235

GRAVY (calculated)

-0.016

Length

552 amino acids

Sequence
(BLAST)

001: MGRSPEMEVD ARSGYCAATR TFRSRRADVP LPADPEVDVV SFLASRRHSG VVALVDAATG RRITFTELWR AVAGAASALA AHPVSLRKGH VALILSPNSV
101: HFPVAALAAM SLGAVLTTAN PLNTPAEIAK QVADARPVLA FTTRELLPKL PRAHDLRVVL LESARLPGDS SDPRIVATIE EISATTPDPA RRKDRVTQDD
201: PATLLYSSGT TGPSKGVVAT HRSLISMVQI IMTRFRLEGS DKTETFLCTV PMFHVYGLVA FATGLLGCGA TVVVLSKYEL PEMLRSINAY GVTYLPLVPP
301: ILVAMVAHPK PLPLGQMRKV LSGGAPLGKE LIEGFREKYP QVEILQGYGL TESTAIGAST DSAEESRRYG TAGLLSPNTE AKIVDPDSGE ALPVNRTGEL
401: WIRGPYVMKG YFKNAEATQS TLTPDGWLKT GDLCYIDEDG YLFVVDRLKE LIKYKGYQVP PAELEALLLT HPEVTDVAVI PFPDREVGQF PMAYIVRKKG
501: SNLSEREVME FVAKQVAPYK KVRKVAFVTD IPKNASGKIL RKDLIKLATS KL

Best Arabidopsis Sequence Match ( AT1G20510.1 )
(BLAST)

001: MASVNSRSGF CNSNSTFYSK RTPIPLPPNP SLDVTTFISS QAHRGRIAFI DASTGQNLTF TELWRAVESV ADCLSEIGIR KGHVVLLLSP NSILFPVVCL
101: SVMSLGAIIT TTNPLNTSNE IAKQIKDSNP VLAFTTSQLL PKISAAAKKL PIVLMDEERV DSVGDVRRLV EMMKKEPSGN RVKERVDQDD TATLLYSSGT
201: TGMSKGVISS HRNLIAMVQT IVNRFGSDDG EQRFICTVPM FHIYGLAAFA TGLLAYGSTI IVLSKFEMHE MMSAIGKYQA TSLPLVPPIL VAMVNGADQI
301: KAKYDLSSMH TVLCGGAPLS KEVTEGFAEK YPTVKILQGY GLTESTGIGA STDTVEESRR YGTAGKLSAS MEGRIVDPVT GQILGPKQTG ELWLKGPSIM
401: KGYFSNEEAT SSTLDSEGWL RTGDLCYIDE DGFIFVVDRL KELIKYKGYQ VAPAELEALL LTHPEITDAA VIPFPDKEVG QFPMAYVVRK TGSSLSEKTI
501: MEFVAKQVAP YKRIRKVAFV SSIPKNPSGK ILRKDLIKIA TSNSKL

Arabidopsis Description

4CLL54-coumarate--CoA ligase-like 5 [Source:UniProtKB/Swiss-Prot;Acc:Q84P21]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.