Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 6
- mitochondrion 1
- peroxisome 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY33631 | Canola | plastid | 90.84 | 89.69 |
| Bra016463.1-P | Field mustard | plastid | 90.48 | 89.33 |
| CDX96633 | Canola | plastid | 90.48 | 89.33 |
| PGSC0003DMT400075394 | Potato | peroxisome, plastid | 75.82 | 75.14 |
| Solyc12g094520.1.1 | Tomato | plastid | 75.64 | 74.95 |
| KRH17509 | Soybean | peroxisome, plastid | 74.54 | 74.13 |
| VIT_18s0001g00290.t01 | Wine grape | peroxisome | 74.18 | 73.77 |
| VIT_18s0001g00280.t01 | Wine grape | peroxisome, plastid | 69.41 | 69.03 |
| AT1G20500.1 | Thale cress | plastid | 69.23 | 68.73 |
| GSMUA_Achr8P13230_001 | Banana | peroxisome | 62.27 | 67.59 |
| AT5G38120.1 | Thale cress | plastid | 64.29 | 63.82 |
| AT1G20480.1 | Thale cress | peroxisome | 65.93 | 63.72 |
| TraesCS5A01G498800.1 | Wheat | peroxisome | 63.37 | 62.68 |
| AT1G20490.2 | Thale cress | peroxisome | 51.1 | 62.42 |
| TraesCS4B01G326800.1 | Wheat | peroxisome, plastid | 63.0 | 62.32 |
| TraesCS4D01G323500.1 | Wheat | plastid | 62.82 | 62.25 |
| HORVU4Hr1G081940.3 | Barley | peroxisome | 62.64 | 62.18 |
| Os03t0132000-01 | Rice | plasma membrane | 62.64 | 61.96 |
| Zm00001d027519_P001 | Maize | plasma membrane | 62.45 | 61.89 |
| EER95569 | Sorghum | peroxisome | 62.64 | 61.84 |
| AT5G63380.1 | Thale cress | peroxisome | 44.14 | 42.88 |
| AT4G05160.1 | Thale cress | peroxisome | 41.58 | 41.73 |
| AT4G19010.1 | Thale cress | peroxisome, plastid | 39.74 | 38.34 |
| AT1G51680.1 | Thale cress | peroxisome | 37.91 | 36.9 |
| AT1G65060.1 | Thale cress | peroxisome | 37.18 | 36.19 |
| AT3G21240.1 | Thale cress | peroxisome | 36.63 | 35.97 |
| AT1G62940.1 | Thale cress | peroxisome | 34.8 | 35.06 |
| AT3G21230.1 | Thale cress | peroxisome | 36.26 | 34.74 |
Protein Annotations
| MapMan:11.7.1.7 | Gene3D:3.30.300.30 | Gene3D:3.40.50.12780 | EntrezGene:838639 | ProteinID:AAF79611.1 | ProteinID:AEE29980.1 |
| ProteinID:AEE29981.1 | EMBL:AF360250 | InterPro:AMP-bd_C | InterPro:AMP-binding_CS | InterPro:AMP-dep_Synth/Lig | ArrayExpress:AT1G20510 |
| EnsemblPlantsGene:AT1G20510 | RefSeq:AT1G20510 | TAIR:AT1G20510 | RefSeq:AT1G20510-TAIR-G | EnsemblPlants:AT1G20510.1 | TAIR:AT1G20510.1 |
| EMBL:AY040047 | EMBL:AY250838 | Unigene:At.15241 | EMBL:EF014466 | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005777 | GO:GO:0006950 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009611 | GO:GO:0009695 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016874 |
| RefSeq:NP_564115.1 | RefSeq:NP_973872.1 | Symbol:OPCL1 | PFAM:PF00501 | PFAM:PF13193 | PO:PO:0000013 |
| PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 |
| PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 |
| PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 |
| PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 |
| PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | ScanProsite:PS00455 |
| PANTHER:PTHR24096 | PANTHER:PTHR24096:SF186 | UniProt:Q84P21 | SUPFAM:SSF56801 | TMHMM:TMhelix | UniParc:UPI000009F4D1 |
Description
4CLL54-coumarate--CoA ligase-like 5 [Source:UniProtKB/Swiss-Prot;Acc:Q84P21]
Coordinates
chr1:-:7103375..7106121
Molecular Weight (calculated)
59378.0 Da
IEP (calculated)
8.515
GRAVY (calculated)
-0.019
Length
546 amino acids
Sequence
(BLAST)
(BLAST)
001: MASVNSRSGF CNSNSTFYSK RTPIPLPPNP SLDVTTFISS QAHRGRIAFI DASTGQNLTF TELWRAVESV ADCLSEIGIR KGHVVLLLSP NSILFPVVCL
101: SVMSLGAIIT TTNPLNTSNE IAKQIKDSNP VLAFTTSQLL PKISAAAKKL PIVLMDEERV DSVGDVRRLV EMMKKEPSGN RVKERVDQDD TATLLYSSGT
201: TGMSKGVISS HRNLIAMVQT IVNRFGSDDG EQRFICTVPM FHIYGLAAFA TGLLAYGSTI IVLSKFEMHE MMSAIGKYQA TSLPLVPPIL VAMVNGADQI
301: KAKYDLSSMH TVLCGGAPLS KEVTEGFAEK YPTVKILQGY GLTESTGIGA STDTVEESRR YGTAGKLSAS MEGRIVDPVT GQILGPKQTG ELWLKGPSIM
401: KGYFSNEEAT SSTLDSEGWL RTGDLCYIDE DGFIFVVDRL KELIKYKGYQ VAPAELEALL LTHPEITDAA VIPFPDKEVG QFPMAYVVRK TGSSLSEKTI
501: MEFVAKQVAP YKRIRKVAFV SSIPKNPSGK ILRKDLIKIA TSNSKL
101: SVMSLGAIIT TTNPLNTSNE IAKQIKDSNP VLAFTTSQLL PKISAAAKKL PIVLMDEERV DSVGDVRRLV EMMKKEPSGN RVKERVDQDD TATLLYSSGT
201: TGMSKGVISS HRNLIAMVQT IVNRFGSDDG EQRFICTVPM FHIYGLAAFA TGLLAYGSTI IVLSKFEMHE MMSAIGKYQA TSLPLVPPIL VAMVNGADQI
301: KAKYDLSSMH TVLCGGAPLS KEVTEGFAEK YPTVKILQGY GLTESTGIGA STDTVEESRR YGTAGKLSAS MEGRIVDPVT GQILGPKQTG ELWLKGPSIM
401: KGYFSNEEAT SSTLDSEGWL RTGDLCYIDE DGFIFVVDRL KELIKYKGYQ VAPAELEALL LTHPEITDAA VIPFPDKEVG QFPMAYVVRK TGSSLSEKTI
501: MEFVAKQVAP YKRIRKVAFV SSIPKNPSGK ILRKDLIKIA TSNSKL
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.