Subcellular Localization
min:
: max
Winner_takes_all: peroxisome
Predictor Summary:
Predictor Summary:
- cytosol 1
- peroxisome 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY07442 | Canola | peroxisome | 88.59 | 89.39 |
| Bra004109.1-P | Field mustard | peroxisome | 88.59 | 89.39 |
| CDY39293 | Canola | peroxisome | 88.41 | 89.05 |
| VIT_16s0039g02040.t01 | Wine grape | peroxisome | 69.7 | 71.35 |
| KRH77759 | Soybean | peroxisome | 67.56 | 68.29 |
| GSMUA_Achr11P... | Banana | peroxisome, plastid | 63.64 | 66.98 |
| PGSC0003DMT400008182 | Potato | peroxisome | 66.49 | 65.55 |
| Os02t0697400-01 | Rice | plasma membrane | 66.49 | 65.55 |
| EES05680 | Sorghum | peroxisome | 65.95 | 65.37 |
| GSMUA_Achr2P18040_001 | Banana | peroxisome, plastid | 62.39 | 65.06 |
| KRH27719 | Soybean | peroxisome | 62.39 | 64.94 |
| Solyc03g097030.2.1 | Tomato | peroxisome | 65.95 | 64.91 |
| TraesCS6D01G248000.1 | Wheat | peroxisome, plasma membrane | 65.6 | 64.79 |
| TraesCS6B01G294100.1 | Wheat | peroxisome | 66.13 | 64.75 |
| TraesCS6A01G266700.1 | Wheat | peroxisome | 65.95 | 64.57 |
| KRH29003 | Soybean | plastid | 64.88 | 64.54 |
| HORVU0Hr1G018190.2 | Barley | peroxisome | 65.06 | 64.15 |
| AT3G21240.1 | Thale cress | peroxisome | 61.14 | 61.69 |
| AT1G51680.1 | Thale cress | peroxisome | 60.07 | 60.07 |
| Zm00001d051529_P001 | Maize | peroxisome, plasma membrane | 62.39 | 55.2 |
| AT3G21230.1 | Thale cress | peroxisome | 55.79 | 54.91 |
| AT4G05160.1 | Thale cress | peroxisome | 39.39 | 40.62 |
| AT1G20510.1 | Thale cress | plastid | 36.19 | 37.18 |
| AT1G62940.1 | Thale cress | peroxisome | 35.47 | 36.72 |
| AT4G19010.1 | Thale cress | peroxisome, plastid | 35.65 | 35.34 |
| AT1G20480.1 | Thale cress | peroxisome | 35.47 | 35.22 |
| AT1G20500.1 | Thale cress | plastid | 34.4 | 35.09 |
| AT5G63380.1 | Thale cress | peroxisome | 34.22 | 34.16 |
| AT5G38120.1 | Thale cress | plastid | 32.44 | 33.09 |
| AT1G20490.2 | Thale cress | peroxisome | 23.53 | 29.53 |
Protein Annotations
| Gene3D:3.30.300.30 | Gene3D:3.40.50.12780 | Symbol:4CL3 | MapMan:7.8.1.1 | EntrezGene:842814 | MapMan:9.2.1.3 |
| ProteinID:AAD47194.1 | ProteinID:AAF06039.1 | ProteinID:AEE34323.1 | EMBL:AF106088 | InterPro:AMP-bd_C | InterPro:AMP-binding_CS |
| InterPro:AMP-dep_Synth/Lig | ArrayExpress:AT1G65060 | EnsemblPlantsGene:AT1G65060 | RefSeq:AT1G65060 | TAIR:AT1G65060 | RefSeq:AT1G65060-TAIR-G |
| EnsemblPlants:AT1G65060.1 | TAIR:AT1G65060.1 | EMBL:AY058083 | EMBL:AY090306 | EMBL:AY376730 | Unigene:At.11514 |
| GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0007275 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009653 | GO:GO:0009698 | GO:GO:0009987 | GO:GO:0010584 |
| GO:GO:0016043 | GO:GO:0016207 | GO:GO:0016874 | GO:GO:0019748 | RefSeq:NP_176686.1 | PFAM:PF00501 |
| PFAM:PF13193 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 |
| PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007098 | PO:PO:0007103 |
| PO:PO:0007115 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009006 | PO:PO:0009009 |
| PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 |
| PO:PO:0009046 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0025022 | ScanProsite:PS00455 |
| PANTHER:PTHR24096 | PANTHER:PTHR24096:SF169 | UniProt:Q9S777 | SUPFAM:SSF56801 | UniParc:UPI0000124F11 | SEG:seg |
Description
4CL34-coumarate--CoA ligase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9S777]
Coordinates
chr1:-:24167202..24171635
Molecular Weight (calculated)
61314.0 Da
IEP (calculated)
6.308
GRAVY (calculated)
-0.017
Length
561 amino acids
Sequence
(BLAST)
(BLAST)
001: MITAALHEPQ IHKPTDTSVV SDDVLPHSPP TPRIFRSKLP DIDIPNHLPL HTYCFEKLSS VSDKPCLIVG STGKSYTYGE THLICRRVAS GLYKLGIRKG
101: DVIMILLQNS AEFVFSFMGA SMIGAVSTTA NPFYTSQELY KQLKSSGAKL IITHSQYVDK LKNLGENLTL ITTDEPTPEN CLPFSTLITD DETNPFQETV
201: DIGGDDAAAL PFSSGTTGLP KGVVLTHKSL ITSVAQQVDG DNPNLYLKSN DVILCVLPLF HIYSLNSVLL NSLRSGATVL LMHKFEIGAL LDLIQRHRVT
301: IAALVPPLVI ALAKNPTVNS YDLSSVRFVL SGAAPLGKEL QDSLRRRLPQ AILGQGYGMT EAGPVLSMSL GFAKEPIPTK SGSCGTVVRN AELKVVHLET
401: RLSLGYNQPG EICIRGQQIM KEYLNDPEAT SATIDEEGWL HTGDIGYVDE DDEIFIVDRL KEVIKFKGFQ VPPAELESLL INHHSIADAA VVPQNDEVAG
501: EVPVAFVVRS NGNDITEEDV KEYVAKQVVF YKRLHKVFFV ASIPKSPSGK ILRKDLKAKL C
101: DVIMILLQNS AEFVFSFMGA SMIGAVSTTA NPFYTSQELY KQLKSSGAKL IITHSQYVDK LKNLGENLTL ITTDEPTPEN CLPFSTLITD DETNPFQETV
201: DIGGDDAAAL PFSSGTTGLP KGVVLTHKSL ITSVAQQVDG DNPNLYLKSN DVILCVLPLF HIYSLNSVLL NSLRSGATVL LMHKFEIGAL LDLIQRHRVT
301: IAALVPPLVI ALAKNPTVNS YDLSSVRFVL SGAAPLGKEL QDSLRRRLPQ AILGQGYGMT EAGPVLSMSL GFAKEPIPTK SGSCGTVVRN AELKVVHLET
401: RLSLGYNQPG EICIRGQQIM KEYLNDPEAT SATIDEEGWL HTGDIGYVDE DDEIFIVDRL KEVIKFKGFQ VPPAELESLL INHHSIADAA VVPQNDEVAG
501: EVPVAFVVRS NGNDITEEDV KEYVAKQVVF YKRLHKVFFV ASIPKSPSGK ILRKDLKAKL C
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.