Factsheet for Os02t0697400-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

cytosol 3
peroxisome 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

plasma membrane: 27800704

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G248000.1	Wheat	peroxisome, plasma membrane	86.47	86.62
TraesCS6A01G266700.1	Wheat	peroxisome	86.99	86.39
TraesCS6B01G294100.1	Wheat	peroxisome	86.64	86.04
HORVU0Hr1G018190.2	Barley	peroxisome	85.76	85.76
EES05680	Sorghum	peroxisome	85.24	85.69
GSMUA_Achr11P...	Banana	peroxisome, plastid	69.77	74.48
GSMUA_Achr2P18040_001	Banana	peroxisome, plastid	68.54	72.49
Zm00001d051529_P001	Maize	peroxisome, plasma membrane	79.44	71.29
VIT_16s0039g02040.t01	Wine grape	peroxisome	68.54	71.17
Bra004109.1-P	Field mustard	peroxisome	65.03	66.55
CDY07442	Canola	peroxisome	65.03	66.55
AT1G65060.1	Thale cress	peroxisome	65.55	66.49
CDY39293	Canola	peroxisome	64.67	66.07
PGSC0003DMT400008182	Potato	peroxisome	65.91	65.91
Solyc03g097030.2.1	Tomato	peroxisome	65.55	65.44
KRH77759	Soybean	peroxisome	63.8	65.41
Os08t0448000-01	Rice	peroxisome	59.75	63.08
KRH29003	Soybean	plastid	62.21	62.77
KRH27719	Soybean	peroxisome	58.35	61.6
Os06t0656500-01	Rice	peroxisome	60.11	61.18
Os02t0177600-01	Rice	plasma membrane	58.88	60.47
Os08t0245200-01	Rice	extracellular	56.77	57.27
Os03t0152400-01	Rice	plasma membrane	41.48	42.75
Os04t0310800-01	Rice	peroxisome	37.43	38.38
Os03t0132000-01	Rice	plasma membrane	36.2	37.32
Os07t0280200-01	Rice	peroxisome	33.57	34.23
Os10t0578950-00	Rice	peroxisome	33.57	34.23
Os01t0901600-01	Rice	peroxisome, plastid	34.45	32.78
Os08t0143300-00	Rice	peroxisome, plastid	33.39	32.15
Os01t0901500-01	Rice	plastid	24.43	31.45
Os07t0639100-00	Rice	peroxisome	32.51	31.14

Protein Annotations

Gene3D:3.30.300.30	Gene3D:3.40.50.12780	EntrezGene:4330407	MapMan:7.8.1.1	MapMan:9.2.1.3	EMBL:AK105636
InterPro:AMP-bd_C	InterPro:AMP-binding_CS	InterPro:AMP-dep_Synth/Lig	ProteinID:BAD07859.1	ProteinID:BAD08175.1	ProteinID:BAF09733.1
ProteinID:BAS80426.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005524
GO:GO:0008150	GO:GO:0008152	GO:GO:0009698	GO:GO:0009987	GO:GO:0016207	GO:GO:0016874
GO:GO:0019748	EMBL:L43362	EnsemblPlantsGene:Os02g0697400	EnsemblPlants:Os02t0697400-01	PFAM:PF00501	PFAM:PF13193
ScanProsite:PS00455	PANTHER:PTHR24096	PANTHER:PTHR24096:SF169	UniProt:Q42982	SUPFAM:SSF56801	UniParc:UPI0000236823
RefSeq:XP_015624111.1	SEG:seg	:	:	:	:

Description

4-COUMARATE:COENZYME A LIGASE 24-coumarate:coenzyme A ligase, Flavonoid biosynthesis (Os02t0697400-01)

Coordinates

chr2:-:28677205..28680864

Molecular Weight (calculated)

60818.5 Da

IEP (calculated)

5.157

GRAVY (calculated)

0.207

Length

569 amino acids

Sequence
(BLAST)

001: MITVAAPEAQ PQVAAAVDEA PPEAVTVFRS KLPDIDIPSH LPLHEYCFAR AAELPDAPCL IAAATGRTYT FAETRLLCRR AAAALHRLGV GHGDRVMVLL
101: QNCVEFAVAF FAASFLGAVT TAANPFCTPQ EIHKQFKASG VKLILTQSVY VDKLRQHEAF PRIDACTVGD DTLTVITIDD DEATPEGCLP FWDLIADADE
201: GSVPEVAISP DDPVALPFSS GTTGLPKGVV LTHRSVVSGV AQQVDGENPN LHMGAGDVAL CVLPLFHIFS LNSVLLCAVR AGAAVALMPR FEMGAMLGAI
301: ERWRVTVAAV VPPLVLALAK NPFVERHDLS SIRIVLSGAA PLGKELEDAL RARLPQAIFG QGYGMTEAGP VLSMCPAFAK EPTPAKSGSC GTVVRNAELK
401: VVDPDTGFSL GRNLPGEICI RGPQIMKGYL NDPEATAATI DVEGWLHTGD IGYVDDDDEV FIVDRVKELI KFKGFQVPPA ELESLLIAHP SIADAAVVPQ
501: KDDVAGEVPV AFVVRAADSD ITEESIKEFI SKQVVFYKRL HKVHFIHAIP KSASGKILRR ELRAKLAAC

Best Arabidopsis Sequence Match ( AT1G65060.1 )
(BLAST)

001: MITAALHEPQ IHKPTDTSVV SDDVLPHSPP TPRIFRSKLP DIDIPNHLPL HTYCFEKLSS VSDKPCLIVG STGKSYTYGE THLICRRVAS GLYKLGIRKG
101: DVIMILLQNS AEFVFSFMGA SMIGAVSTTA NPFYTSQELY KQLKSSGAKL IITHSQYVDK LKNLGENLTL ITTDEPTPEN CLPFSTLITD DETNPFQETV
201: DIGGDDAAAL PFSSGTTGLP KGVVLTHKSL ITSVAQQVDG DNPNLYLKSN DVILCVLPLF HIYSLNSVLL NSLRSGATVL LMHKFEIGAL LDLIQRHRVT
301: IAALVPPLVI ALAKNPTVNS YDLSSVRFVL SGAAPLGKEL QDSLRRRLPQ AILGQGYGMT EAGPVLSMSL GFAKEPIPTK SGSCGTVVRN AELKVVHLET
401: RLSLGYNQPG EICIRGQQIM KEYLNDPEAT SATIDEEGWL HTGDIGYVDE DDEIFIVDRL KEVIKFKGFQ VPPAELESLL INHHSIADAA VVPQNDEVAG
501: EVPVAFVVRS NGNDITEEDV KEYVAKQVVF YKRLHKVFFV ASIPKSPSGK ILRKDLKAKL C

Arabidopsis Description

4CL34-coumarate--CoA ligase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9S777]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.