Factsheet for Os03t0152400-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

cytosol 1
vacuole 1
plastid 3
peroxisome 4
plasma membrane 1

Predictors

GFP

MS/MS

Papers

extracellular: 18372294
plasma membrane: 27800704

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

msms PMID: 18372294 doi

T Aki, M Shigyo, R Nakano, T Yoneyama, S Yanagisawa

Department of Applied Biological Chemistry, Graduate School of Agricultural and Life Sciences, The University of Tokyo, Tokyo, 113-8657 Japan.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU4Hr1G072130.2	Barley	mitochondrion, peroxisome	34.06	82.46
TraesCS4D01G268400.1	Wheat	peroxisome	80.8	81.54
TraesCS4A01G036200.1	Wheat	peroxisome	80.8	81.24
TraesCS4B01G269200.1	Wheat	peroxisome	81.52	81.08
KXG40154	Sorghum	peroxisome	80.8	80.65
Zm00001d027711_P003	Maize	extracellular	79.71	79.28
OQU91476	Sorghum	peroxisome	77.17	76.48
Zm00001d033055_P001	Maize	peroxisome	76.09	76.36
KRH25085	Soybean	peroxisome	37.14	67.21
GSMUA_Achr5P19650_001	Banana	peroxisome	57.79	65.64
GSMUA_Achr8P14210_001	Banana	peroxisome	58.88	65.52
PGSC0003DMT400020978	Potato	peroxisome	57.61	58.78
VIT_06s0061g00450.t01	Wine grape	peroxisome	57.79	58.64
KRH22842	Soybean	peroxisome, plastid	57.25	58.52
Solyc11g069050.1.1	Tomato	peroxisome	56.7	58.18
VIT_08s0007g05050.t01	Wine grape	plastid	55.8	58.11
AT4G05160.1	Thale cress	peroxisome	57.25	58.09
CDY46375	Canola	peroxisome	56.7	57.75
CDY39155	Canola	peroxisome	56.7	57.75
Bra029561.1-P	Field mustard	peroxisome	56.52	57.56
CDY46376	Canola	peroxisome	55.43	56.77
KRH30593	Soybean	peroxisome	56.88	56.27
CDY39153	Canola	peroxisome	54.17	55.47
Bra029560.1-P	Field mustard	peroxisome	48.19	49.81
HORVU4Hr1G072150.1	Barley	peroxisome	43.84	43.45
Os03t0132000-01	Rice	plasma membrane	42.21	42.21
Os08t0448000-01	Rice	peroxisome	40.58	41.56
Os02t0697400-01	Rice	plasma membrane	42.75	41.48
Os04t0310800-01	Rice	peroxisome	39.13	38.92
Os10t0578950-00	Rice	peroxisome	39.13	38.71
Os08t0245200-01	Rice	extracellular	39.13	38.3
Os07t0280200-01	Rice	peroxisome	38.59	38.17
Os02t0177600-01	Rice	plasma membrane	38.22	38.09
Os06t0656500-01	Rice	peroxisome	38.41	37.92
Os08t0143300-00	Rice	peroxisome, plastid	38.95	36.38
Os01t0901600-01	Rice	peroxisome, plastid	38.95	35.95
Os07t0639100-00	Rice	peroxisome	38.41	35.69
Os01t0901500-01	Rice	plastid	28.08	35.07

Protein Annotations

Gene3D:3.30.300.30	Gene3D:3.40.50.12780	MapMan:35.1	EntrezGene:4331650	ProteinID:ABF94022.1	EMBL:AK242087
InterPro:AMP-bd_C	InterPro:AMP-binding_CS	InterPro:AMP-dep_Synth/Lig	ProteinID:BAF10906.2	ProteinID:BAS82339.1	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004321	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005777	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009695	GO:GO:0009987	GO:GO:0016740	GO:GO:0016874	EnsemblPlantsGene:Os03g0152400
EnsemblPlants:Os03t0152400-01	PFAM:PF00501	PFAM:PF13193	ScanProsite:PS00455	PANTHER:PTHR24096	PANTHER:PTHR24096:SF305
UniProt:Q0DV32	SUPFAM:SSF56801	UniParc:UPI0000DB40E9	RefSeq:XP_015629881.1	SEG:seg	:

Description

acyl-CoA synthetase 1Similar to 4-coumarate--CoA ligase-like 1. (Os03t0152400-01)

Coordinates

chr3:-:2883005..2887887

Molecular Weight (calculated)

58974.7 Da

IEP (calculated)

9.039

GRAVY (calculated)

0.159

Length

552 amino acids

Sequence
(BLAST)

001: MASASVPAAG YGADGVYRSL RPPAPVASDP GLSLTDLLLR RADACPSAVA LADAAAGGRA LTFAELRSAV LSTAVALSSR AGVRPGDAVL LLAPNCVLYP
101: VCFFAVTALG AVGTTVNPDY TPREIAKQVS DARAKLVITI SALVPKIAGL RLPVILLDDD ANAAAASLPP DATVTLYTNL VAGVKEADYR RPPIKQSDTA
201: ALLYSSGTTG DSKGVILTHR NFIAAARMVT SDQDERREGP NVFLCFLPMF HIFGLSVITY AQLHRGNAII AMSRFDINSL MEAVQRHRVT HLFCVPPVII
301: ALAKHGKAGK YDLSSLKFIG SGAAPLGKDV MEVVAKKFPD SEIVQGYGMT ETCGIISLEY PEKGQAREFG STGTLVSGVE AKIVDIKTLK HLPPNQVGEI
401: CVRGPNVMQG YFNNVQATEF TIKQGWLHTG DLGYFDGGGQ LFVVDRLKEL IKYKGFQIAP AELEGLLLSH PEILDAVVIP FPDAKAGEVP IAYVVRSPDS
501: SLTEVDVQKF IEKQVAYYKR LKRVTFVGSV PKSASGKILR RQLIAQVRSS KL

Best Arabidopsis Sequence Match ( AT4G05160.1 )
(BLAST)

001: MEKSGYGRDG IYRSLRPTLV LPKDPNTSLV SFLFRNSSSY PSKLAIADSD TGDSLTFSQL KSAVARLAHG FHRLGIRKND VVLIFAPNSY QFPLCFLAVT
101: AIGGVFTTAN PLYTVNEVSK QIKDSNPKII ISVNQLFDKI KGFDLPVVLL GSKDTVEIPP GSNSKILSFD NVMELSEPVS EYPFVEIKQS DTAALLYSSG
201: TTGTSKGVEL THGNFIAASL MVTMDQDLMG EYHGVFLCFL PMFHVFGLAV ITYSQLQRGN ALVSMARFEL ELVLKNIEKF RVTHLWVVPP VFLALSKQSI
301: VKKFDLSSLK YIGSGAAPLG KDLMEECGRN IPNVLLMQGY GMTETCGIVS VEDPRLGKRN SGSAGMLAPG VEAQIVSVET GKSQPPNQQG EIWVRGPNMM
401: KGYLNNPQAT KETIDKKSWV HTGDLGYFNE DGNLYVVDRI KELIKYKGFQ VAPAELEGLL VSHPDILDAV VIPFPDEEAG EVPIAFVVRS PNSSITEQDI
501: QKFIAKQVAP YKRLRRVSFI SLVPKSAAGK ILRRELVQQV RSKM

Arabidopsis Description

4CLL74-coumarate--CoA ligase-like 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9M0X9]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.