Factsheet for Os10t0578950-00

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

nucleus 1
extracellular 1
plastid 2
peroxisome 3
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G200200.1	Wheat	peroxisome	76.7	75.35
TraesCS1A01G196700.1	Wheat	peroxisome	76.7	75.35
TraesCS1B01G211300.1	Wheat	peroxisome	75.99	72.23
KXG38810	Sorghum	peroxisome	72.04	70.16
Os08t0143300-00	Rice	peroxisome, plastid	73.84	69.71
HORVU1Hr1G051190.2	Barley	peroxisome	75.99	66.67
GSMUA_Achr11P...	Banana	peroxisome, plasma membrane	38.71	63.53
Zm00001d030132_P002	Maize	peroxisome	70.97	62.26
KRH74284	Soybean	peroxisome	54.12	54.61
GSMUA_Achr11P...	Banana	peroxisome	53.05	54.41
AT4G19010.1	Thale cress	peroxisome, plastid	51.79	51.06
VIT_02s0109g00250.t01	Wine grape	peroxisome, plastid	51.79	50.61
Bra013369.1-P	Field mustard	peroxisome, plastid	51.79	50.44
Solyc08g076300.2.1	Tomato	peroxisome	51.08	49.65
PGSC0003DMT400024014	Potato	peroxisome	50.9	49.48
KRH39635	Soybean	cytosol, golgi, peroxisome	42.83	47.99
Os03t0132000-01	Rice	plasma membrane	42.47	42.93
CDX99401	Canola	peroxisome	47.31	39.52
Os03t0152400-01	Rice	plasma membrane	38.71	39.13
Os07t0280200-01	Rice	peroxisome	37.99	37.99
Os08t0448000-01	Rice	peroxisome	35.66	36.92
Os01t0901600-01	Rice	peroxisome, plastid	38.89	36.29
Os07t0639100-00	Rice	peroxisome	38.53	36.2
Os08t0245200-01	Rice	extracellular	35.48	35.11
Os06t0656500-01	Rice	peroxisome	34.77	34.7
Os01t0901500-01	Rice	plastid	26.88	33.94
Os02t0177600-01	Rice	plasma membrane	33.69	33.94
Os02t0697400-01	Rice	plasma membrane	34.23	33.57
Os04t0310800-01	Rice	peroxisome	32.97	33.15

Protein Annotations

Gene3D:3.30.300.30	Gene3D:3.40.50.12780	MapMan:35.1	EntrezGene:9272068	UniProt:A0A0P0XXS5	InterPro:AMP-bd_C
InterPro:AMP-binding_CS	InterPro:AMP-dep_Synth/Lig	ProteinID:BAT12231.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0008150	GO:GO:0008152	GO:GO:0016020
GO:GO:0016021	GO:GO:0016874	EnsemblPlantsGene:Os10g0578950	EnsemblPlants:Os10t0578950-00	PFAM:PF00501	PFAM:PF13193
ScanProsite:PS00455	PANTHER:PTHR24096	PANTHER:PTHR24096:SF261	SUPFAM:SSF56801	TMHMM:TMhelix	UniParc:UPI0003938E61
RefSeq:XP_015614233.1	SEG:seg	:	:	:	:

Description

acyl-CoA synthetase 2, type 2 ACSSimilar to 4-coumarate--CoA ligase-like 2. (Os10t0578950-00)

Coordinates

chr10:-:23083220..23086588

Molecular Weight (calculated)

60407.1 Da

IEP (calculated)

7.626

GRAVY (calculated)

0.154

Length

558 amino acids

Sequence
(BLAST)

001: MQPDAAATAH PSLSFYSAAT GLYSSLHPPL PLPSDPSLSL VPHLFSHLPL HHHSLLVDAP TAATLSCADF RRLVSSLAAG LRRRLHIARG SLVLLLLPNS
101: LTFPVAFLAV LATGAVATTM NPSSAPAEIA ARLRDTAPSL VLASTHNAAK LPPLAAPLVL VPDTFQQQHD DDQFDFFFHA LLETDPETPV EMGVGVGQDD
201: AAAVLYSSGT SGRSKGVVVT HRNLIAMVEL FVRFEASQYT RPARDNVYLA ALPMFHVYGL SLFAVGLLSL GCTVVVMRRF NVDDAVKAIR KYKVTHLPLV
301: PPIMSALLRA NPPLELDSLL QVSSGAAPLN HTLIHHFLHA FPHVDFIQGY GMTESTAVGT RGFNTCKHKK YASVGLLAPN MHAKIVHLES GSCLPPGSYG
401: ELWLHGPAIM KGYLNDDDDA FTRKDGWLRT GDIAYFDSDG YLFIVGRLKD TIKYKGFQIA PADLEAVLIR HPEIIDVAVT SDEDEEAGEI PVAFVVRKSG
501: STLSCTHVME YVAKQVASYK RVRKVIFVEA IPKSAAGKVL RRLLKDSLVD ASSGRSRL

Best Arabidopsis Sequence Match ( AT4G19010.1 )
(BLAST)

001: MAATHLHIPP NPKTQTSHQN PPFWFSSKTG IYTSKFPSLH LPVDPNLDAV SALFSHKHHG DTALIDSLTG FSISHTELQI MVQSMAAGIY HVLGVRQGDV
101: VSLVLPNSVY FPMIFLSLIS LGAIVTTMNP SSSLGEIKKQ VSECSVGLAF TSTENVEKLS SLGVSVISVS ESYDFDSIRI ENPKFYSIMK ESFGFVPKPL
201: IKQDDVAAIM YSSGTTGASK GVLLTHRNLI ASMELFVRFE ASQYEYPGSS NVYLAALPLC HIYGLSLFVM GLLSLGSTIV VMKRFDASDV VNVIERFKIT
301: HFPVVPPMLM ALTKKAKGVC GEVFKSLKQV SSGAAPLSRK FIEDFLQTLP HVDLIQGYGM TESTAVGTRG FNSEKLSRYS SVGLLAPNMQ AKVVDWSSGS
401: FLPPGNRGEL WIQGPGVMKG YLNNPKATQM SIVEDSWLRT GDIAYFDEDG YLFIVDRIKE IIKYKGFQIA PADLEAVLVS HPLIIDAAVT AAPNEECGEI
501: PVAFVVRRQE TTLSEEDVIS YVASQVAPYR KVRKVVMVNS IPKSPTGKIL RKELKRILTN SVSSRL

Arabidopsis Description

4CLL64-coumarate--CoA ligase-like 6 [Source:UniProtKB/Swiss-Prot;Acc:Q84P24]
SUBAcon: [peroxisome,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.