Factsheet for Solyc08g076300.2.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

cytosol 1
peroxisome 4
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	cytosol, peroxisome, plasma membrane
BaCelLo:	cytosol
MultiLoc:	peroxisome
Plant-mPloc:	peroxisome
PProwler:	peroxisome
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400024014	Potato	peroxisome	95.82	95.82
VIT_02s0109g00250.t01	Wine grape	peroxisome, plastid	63.59	63.92
KRH74284	Soybean	peroxisome	59.23	61.48
AT4G19010.1	Thale cress	peroxisome, plastid	59.58	60.42
GSMUA_Achr11P...	Banana	peroxisome, plasma membrane	34.84	58.82
Bra013369.1-P	Field mustard	peroxisome, plastid	58.36	58.46
GSMUA_Achr11P...	Banana	peroxisome	51.57	54.41
KRH39635	Soybean	cytosol, golgi, peroxisome	45.82	52.81
Os10t0578950-00	Rice	peroxisome	49.65	51.08
TraesCS1D01G200200.1	Wheat	peroxisome	50.52	51.06
Os08t0143300-00	Rice	peroxisome, plastid	52.26	50.76
TraesCS1A01G196700.1	Wheat	peroxisome	50.0	50.53
KXG38810	Sorghum	peroxisome	50.17	50.26
TraesCS1B01G211300.1	Wheat	peroxisome	50.35	49.23
Zm00001d030132_P002	Maize	peroxisome	50.87	45.91
HORVU1Hr1G051190.2	Barley	peroxisome	50.17	45.28
CDX99401	Canola	peroxisome	51.74	44.46
Solyc12g094520.1.1	Tomato	plastid	40.94	42.65
Solyc11g069050.1.1	Tomato	peroxisome	39.2	41.82
Solyc11g007970.1.1	Tomato	peroxisome	40.59	41.24
Solyc03g111170.2.1	Tomato	nucleus	36.93	38.41
Solyc03g117870.2.1	Tomato	plastid	33.8	35.6
Solyc06g068650.2.1	Tomato	peroxisome	33.62	35.54
Solyc12g042460.1.1	Tomato	peroxisome	33.62	35.22
Solyc07g008360.1.1	Tomato	peroxisome	34.84	35.21
Solyc03g097030.2.1	Tomato	peroxisome	33.1	33.33
Solyc02g088710.2.1	Tomato	peroxisome	31.01	32.19

Protein Annotations

EnsemblPlants:Solyc08g076300.2.1	EnsemblPlantsGene:Solyc08g076300.2	Gene3D:3.30.300.30	Gene3D:3.40.50.12780	GO:GO:0003674	GO:GO:0003824
GO:GO:0005575	GO:GO:0008150	GO:GO:0008152	GO:GO:0016020	GO:GO:0016021	InterPro:AMP-bd_C
InterPro:AMP-dep_Synth/Lig	PANTHER:PTHR24096	PANTHER:PTHR24096:SF261	PFAM:PF00501	PFAM:PF13193	SEG:seg
SUPFAM:SSF56801	TMHMM:TMhelix	UniParc:UPI000276BCCB	UniProt:K4CMZ3	MapMan:35.1	:

Description

No Description!

Coordinates

chr8:-:60264047..60268352

Molecular Weight (calculated)

62504.0 Da

IEP (calculated)

5.129

GRAVY (calculated)

0.071

Length

574 amino acids

Sequence
(BLAST)

001: MVTFLKTQLS SHVIEGEESG NGEVEKNPSK THSFPFWYCA ETGIYSSKYP SIKLPEDPLL DVVSFIFSHK NGGVSALVDS ASGISISYSE LYPLVKSMAS
101: GLQQRGVSQG DVVLILLPNS IYFPVILLGV LALGAIATTM NPFSNLLEIK KQALDCSVTL AFTSSDKVDQ LSTLDIPVIG VPEILVSGSN CSESSVFYEL
201: ISCDPNWDSR PKISQQDTAA ILYSSGTTGV GKGVILTHGN FIAMVETFVR FEASQYEYSS SENVYLDVTP MFHVYGLSLF VMGLLSLGTT IVVMSKFDAD
301: EMVKAIERYN VTHFPLVPPL LMALTRRAKD GASSSMKSLK QVSCGAAPVN PKSIEDFVHT LPDVDFIQGY GMTESTATGT RGYNTEKLHN YSSVGLLAPN
401: MQAKVVDWIT GSTLAPNCMG ELWLCGPGVM KGYLNNLEAT KSTIDDNGYL HTGDIAYFDE EGYLYVIDRL KETIKYKGFQ IAPADLESVL VSHPDIIDAA
501: VTGARDEEAG EIPVAFVVKR DGCAVSQTDV IDFVSKQVAP FKRIRKVYFR ASIPRSAAGK ILRKELRNIL TSKL

Best Arabidopsis Sequence Match ( AT4G19010.1 )
(BLAST)

001: MAATHLHIPP NPKTQTSHQN PPFWFSSKTG IYTSKFPSLH LPVDPNLDAV SALFSHKHHG DTALIDSLTG FSISHTELQI MVQSMAAGIY HVLGVRQGDV
101: VSLVLPNSVY FPMIFLSLIS LGAIVTTMNP SSSLGEIKKQ VSECSVGLAF TSTENVEKLS SLGVSVISVS ESYDFDSIRI ENPKFYSIMK ESFGFVPKPL
201: IKQDDVAAIM YSSGTTGASK GVLLTHRNLI ASMELFVRFE ASQYEYPGSS NVYLAALPLC HIYGLSLFVM GLLSLGSTIV VMKRFDASDV VNVIERFKIT
301: HFPVVPPMLM ALTKKAKGVC GEVFKSLKQV SSGAAPLSRK FIEDFLQTLP HVDLIQGYGM TESTAVGTRG FNSEKLSRYS SVGLLAPNMQ AKVVDWSSGS
401: FLPPGNRGEL WIQGPGVMKG YLNNPKATQM SIVEDSWLRT GDIAYFDEDG YLFIVDRIKE IIKYKGFQIA PADLEAVLVS HPLIIDAAVT AAPNEECGEI
501: PVAFVVRRQE TTLSEEDVIS YVASQVAPYR KVRKVVMVNS IPKSPTGKIL RKELKRILTN SVSSRL

Arabidopsis Description

4CLL64-coumarate--CoA ligase-like 6 [Source:UniProtKB/Swiss-Prot;Acc:Q84P24]
SUBAcon: [peroxisome,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.