Factsheet for Os08t0143300-00

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid

Predictor Summary:

plastid 3
mitochondrion 1
peroxisome 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os10t0578950-00	Rice	peroxisome	69.71	73.84
TraesCS1D01G200200.1	Wheat	peroxisome	69.37	72.18
TraesCS1A01G196700.1	Wheat	peroxisome	68.7	71.48
KXG38810	Sorghum	peroxisome	68.19	70.33
TraesCS1B01G211300.1	Wheat	peroxisome	68.53	68.99
HORVU1Hr1G051190.2	Barley	peroxisome	69.88	64.94
GSMUA_Achr11P...	Banana	peroxisome, plasma membrane	36.21	62.94
Zm00001d030132_P002	Maize	peroxisome	67.17	62.42
KRH74284	Soybean	peroxisome	51.61	55.15
GSMUA_Achr11P...	Banana	peroxisome	49.92	54.23
Solyc08g076300.2.1	Tomato	peroxisome	50.76	52.26
Bra013369.1-P	Field mustard	peroxisome, plastid	50.42	52.01
AT4G19010.1	Thale cress	peroxisome, plastid	49.41	51.59
PGSC0003DMT400024014	Potato	peroxisome	50.08	51.57
VIT_02s0109g00250.t01	Wine grape	peroxisome, plastid	49.58	51.31
KRH39635	Soybean	cytosol, golgi, peroxisome	41.12	48.8
Os03t0132000-01	Rice	plasma membrane	38.92	41.67
CDX99401	Canola	peroxisome	45.85	40.57
Os03t0152400-01	Rice	plasma membrane	36.38	38.95
Os07t0280200-01	Rice	peroxisome	36.21	38.35
Os08t0448000-01	Rice	peroxisome	34.69	38.03
Os01t0901600-01	Rice	peroxisome, plastid	37.06	36.62
Os06t0656500-01	Rice	peroxisome	34.01	35.96
Os02t0177600-01	Rice	plasma membrane	33.67	35.92
Os07t0639100-00	Rice	peroxisome	35.87	35.69
Os08t0245200-01	Rice	extracellular	34.01	35.64
Os04t0310800-01	Rice	peroxisome	32.32	34.41
Os01t0901500-01	Rice	plastid	25.21	33.71
Os02t0697400-01	Rice	plasma membrane	32.15	33.39

Protein Annotations

Gene3D:3.30.300.30	Gene3D:3.40.50.12780	MapMan:35.1	EntrezGene:9269113	InterPro:AMP-bd_C	InterPro:AMP-binding_CS
InterPro:AMP-dep_Synth/Lig	ProteinID:BAD13196.1	ProteinID:BAD17022.1	ProteinID:BAH94104.1	ProteinID:BAT03799.1	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0008150
GO:GO:0008152	GO:GO:0016020	GO:GO:0016021	GO:GO:0016874	EnsemblPlantsGene:Os08g0143300	EnsemblPlants:Os08t0143300-00
PFAM:PF00501	PFAM:PF13193	ScanProsite:PS00455	PANTHER:PTHR24096	PANTHER:PTHR24096:SF261	UniProt:Q6YYZ2
SUPFAM:SSF56801	TMHMM:TMhelix	UniParc:UPI0000350445	RefSeq:XP_015650198.1	SEG:seg	:

Description

acyl-CoA synthetase 3AMP-dependent synthetase and ligase domain containing protein. (Os08t0143300-00)

Coordinates

chr8:+:2382108..2385161

Molecular Weight (calculated)

62085.0 Da

IEP (calculated)

8.457

GRAVY (calculated)

0.191

Length

591 amino acids

Sequence
(BLAST)

001: MQRDAIAAAR NAGCSSGRIS QPPPPPFYSA ATGIYSSIHP PVALPTDPSL TLVAHLFARL PLADPGAPTL VDAATASAVS RADLRRLVAS LAAGLRRRHG
101: VRKGSVVLLL LPNSVAFPVS FLAVLAAGAV ATTMNPSSSP AEIAAQARAT GACLVLASRD GAARLPPLAA PVVLVPEILD HSAAADDGDD DQRVFAAFRA
201: MLDGGGGDGT ETAVPVVGQD DAVAILYSSG TSGRSKGVVL THRNLIAMTE LFVRFEASQY HARGARENVY MAALPMSHVY GLSLFAVGLL SIGATVVVMR
301: RFDAGDAVAA IGRYKVTHMP LVPPIMAAMV RAAAAGGVPP SQVASLVQVS CGAAPITAAL IHEFLQAFPH VDFIQGYGMT ESTAVGTRGF NTSKHKKYTS
401: VGLLAPNMHA KIVHLESSSC LPPGFSGELW LHGPGIMKGY LSDDDDACTR KDGWLRTGDI AYFDLDGYLY IVGRLKDTIK YKGFQIAPGD LEEVLIHHPE
501: ILDVAVTSAE DEEAGEIPVA FVVRRSGSNL SCKQVMEYVA KQVAPYKRVR KVVFVEAIPK SPAGKVLRRL LRNSHDTAAA ATSSCSISSK L

Best Arabidopsis Sequence Match ( AT4G19010.1 )
(BLAST)

001: MAATHLHIPP NPKTQTSHQN PPFWFSSKTG IYTSKFPSLH LPVDPNLDAV SALFSHKHHG DTALIDSLTG FSISHTELQI MVQSMAAGIY HVLGVRQGDV
101: VSLVLPNSVY FPMIFLSLIS LGAIVTTMNP SSSLGEIKKQ VSECSVGLAF TSTENVEKLS SLGVSVISVS ESYDFDSIRI ENPKFYSIMK ESFGFVPKPL
201: IKQDDVAAIM YSSGTTGASK GVLLTHRNLI ASMELFVRFE ASQYEYPGSS NVYLAALPLC HIYGLSLFVM GLLSLGSTIV VMKRFDASDV VNVIERFKIT
301: HFPVVPPMLM ALTKKAKGVC GEVFKSLKQV SSGAAPLSRK FIEDFLQTLP HVDLIQGYGM TESTAVGTRG FNSEKLSRYS SVGLLAPNMQ AKVVDWSSGS
401: FLPPGNRGEL WIQGPGVMKG YLNNPKATQM SIVEDSWLRT GDIAYFDEDG YLFIVDRIKE IIKYKGFQIA PADLEAVLVS HPLIIDAAVT AAPNEECGEI
501: PVAFVVRRQE TTLSEEDVIS YVASQVAPYR KVRKVVMVNS IPKSPTGKIL RKELKRILTN SVSSRL

Arabidopsis Description

4CLL64-coumarate--CoA ligase-like 6 [Source:UniProtKB/Swiss-Prot;Acc:Q84P24]
SUBAcon: [peroxisome,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.