Factsheet for Os08t0448000-01

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

cytosol 2
vacuole 1
peroxisome 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G171200.1	Wheat	peroxisome	88.13	87.96
TraesCS2D01G150400.1	Wheat	peroxisome	87.2	87.04
TraesCS2A01G145800.1	Wheat	peroxisome	86.09	85.61
Zm00001d032103_P001	Maize	peroxisome	85.53	83.06
EES15085	Sorghum	peroxisome	84.42	82.43
GSMUA_Achr9P22840_001	Banana	peroxisome	50.65	71.47
GSMUA_Achr4P12590_001	Banana	peroxisome	63.45	69.94
GSMUA_Achr4P05820_001	Banana	peroxisome	67.16	69.35
GSMUA_AchrUn_...	Banana	peroxisome	65.31	67.95
CDY53918	Canola	peroxisome	23.56	67.91
GSMUA_Achr1P23450_001	Banana	peroxisome	65.49	67.88
GSMUA_Achr7P05070_001	Banana	peroxisome	60.48	66.13
CDY32418	Canola	peroxisome	22.45	66.12
Os06t0656500-01	Rice	peroxisome	66.79	64.4
PGSC0003DMT400074444	Potato	peroxisome	64.38	63.9
Os02t0177600-01	Rice	plasma membrane	65.68	63.9
VIT_11s0052g01090.t01	Wine grape	peroxisome	64.38	63.32
Solyc06g068650.2.1	Tomato	peroxisome	63.45	62.98
Solyc03g117870.2.1	Tomato	plastid	63.27	62.57
PGSC0003DMT400036886	Potato	peroxisome	62.89	62.2
KRH02884	Soybean	peroxisome	62.71	61.79
KRH02885	Soybean	peroxisome	61.41	61.75
Os08t0245200-01	Rice	extracellular	64.56	61.7
Bra031266.1-P	Field mustard	peroxisome	62.89	61.41
CDY19568	Canola	peroxisome	62.89	61.41
KRH09616	Soybean	mitochondrion, peroxisome	61.04	61.15
CDX87831	Canola	peroxisome	62.15	60.8
CDY43921	Canola	peroxisome	62.15	60.8
AT3G21240.1	Thale cress	peroxisome	62.52	60.61
KRH23700	Soybean	peroxisome	61.41	60.51
Bra030429.1-P	Field mustard	peroxisome	61.97	60.51
VIT_11s0052g01110.t01	Wine grape	peroxisome	60.11	60.11
AT1G51680.1	Thale cress	peroxisome	62.52	60.07
Os02t0697400-01	Rice	plasma membrane	63.08	59.75
PGSC0003DMT400051216	Potato	peroxisome	62.89	59.37
Solyc07g008360.1.1	Tomato	peroxisome	62.52	59.33
Solyc12g042460.1.1	Tomato	peroxisome	60.11	59.12
PGSC0003DMT400037485	Potato	peroxisome	59.93	58.94
KRH02886	Soybean	peroxisome, plastid	59.74	57.09
CDY68920	Canola	peroxisome	57.7	56.24
Bra031263.1-P	Field mustard	peroxisome	57.33	55.88
CDY06431	Canola	peroxisome	57.33	55.88
CDY19570	Canola	peroxisome	57.51	55.46
CDY48875	Canola	mitochondrion, plastid, vacuole	45.64	55.41
Bra031265.1-P	Field mustard	peroxisome	57.14	55.1
AT3G21230.1	Thale cress	peroxisome	58.26	55.09
CDX82208	Canola	peroxisome	58.07	54.72
CDY32416	Canola	peroxisome	58.07	54.53
Bra001819.1-P	Field mustard	peroxisome	57.88	54.36
KRH19011	Soybean	peroxisome	56.03	53.74
Bra001820.1-P	Field mustard	peroxisome	57.14	52.65
HORVU0Hr1G002720.3	Barley	mitochondrion, plastid	47.68	47.07
CDY06435	Canola	vacuole	37.29	45.17
CDY71190	Canola	peroxisome	30.8	44.86
CDY65966	Canola	peroxisome	29.13	44.48
Os03t0152400-01	Rice	plasma membrane	41.56	40.58
Os04t0310800-01	Rice	peroxisome	40.26	39.1
Os03t0132000-01	Rice	plasma membrane	38.59	37.68
Os10t0578950-00	Rice	peroxisome	36.92	35.66
Os08t0143300-00	Rice	peroxisome, plastid	38.03	34.69
Os07t0280200-01	Rice	peroxisome	33.95	32.8
Os07t0639100-00	Rice	peroxisome	35.81	32.49
Os01t0901500-01	Rice	plastid	26.53	32.35
Os01t0901600-01	Rice	peroxisome, plastid	35.81	32.27

Protein Annotations

Gene3D:3.30.300.30	Gene3D:3.40.50.12780	EntrezGene:4345717	MapMan:7.8.1.1	MapMan:9.2.1.3	EMBL:AK120964
InterPro:AMP-bd_C	InterPro:AMP-binding_CS	InterPro:AMP-dep_Synth/Lig	ProteinID:BAD09442.1	ProteinID:BAD09825.1	ProteinID:BAF23849.1
ProteinID:BAT05682.1	ProteinID:EAZ42922.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005524	GO:GO:0008150	GO:GO:0008152	GO:GO:0009698	GO:GO:0009987	GO:GO:0016207
GO:GO:0016874	GO:GO:0019748	EnsemblPlantsGene:Os08g0448000	EnsemblPlants:Os08t0448000-01	PFAM:PF00501	PFAM:PF13193
ScanProsite:PS00455	PANTHER:PTHR24096	PANTHER:PTHR24096:SF244	UniProt:Q6ZAC1	SUPFAM:SSF56801	UniParc:UPI000023AE11
RefSeq:XP_015650830.1	SEG:seg	:	:	:	:

Description

4-COUMARATE:COENZYME A LIGASE 54-coumarate:coenzyme A ligase, Lignin biosynthesis, Defense against wounding (Os08t0448000-01)

Coordinates

chr8:-:21873076..21875497

Molecular Weight (calculated)

57048.5 Da

IEP (calculated)

6.157

GRAVY (calculated)

0.235

Length

539 amino acids

Sequence
(BLAST)

001: MGSLPEQFVF RSRLPDIAIP DHLPLHDYVF ERLADRRDRA CLIDGATGET LSFGDVDALS RRVAAGLSSI GVCHGSTVML LLPNSVEFAV AFLASSRLGA
101: VTTTANPLHT PPEIAKQVAA SGATVVVTEP AFVAKVSGLA GVTVVATGGG AERCASFAGL AAADGSALPE VAIDVANDAV ALPYSSGTTG LPKGVMLSHR
201: GLVTSVAQLV DGENPNLHLR EDDVVLCVLP MFHVYSLHSI LLCGMRAGAA IVVMKRFDTV KMLQLVERHG VTIAPLVPPI VVEMAKSDAL DRHDLSSIRM
301: VISGAAPMGK ELQDIVHAKL PNAVLGQGYG MTEAGPVLSM CMAFAKEPTP VKSGACGTVV RNAELKIVDP DTGLSLPRNQ PGEICIRGKQ IMKGYLNNPE
401: ATEKTIDKDG WLHTGDIGFV DDDDEIFIVD RLKELIKYKG FQVAPAELEA MLIAHAAVAD AAVVPMKDDS CGEIPVAFVV ARDGSGITDD EIKQYVAKQV
501: VFYKRLHKIF FVDAIPKAPS GKILRKDLRA KLAAGIPAC

Best Arabidopsis Sequence Match ( AT3G21240.1 )
(BLAST)

001: MTTQDVIVND QNDQKQCSND VIFRSRLPDI YIPNHLPLHD YIFENISEFA AKPCLINGPT GEVYTYADVH VTSRKLAAGL HNLGVKQHDV VMILLPNSPE
101: VVLTFLAASF IGAITTSANP FFTPAEISKQ AKASAAKLIV TQSRYVDKIK NLQNDGVLIV TTDSDAIPEN CLRFSELTQS EEPRVDSIPE KISPEDVVAL
201: PFSSGTTGLP KGVMLTHKGL VTSVAQQVDG ENPNLYFNRD DVILCVLPMF HIYALNSIML CSLRVGATIL IMPKFEITLL LEQIQRCKVT VAMVVPPIVL
301: AIAKSPETEK YDLSSVRMVK SGAAPLGKEL EDAISAKFPN AKLGQGYGMT EAGPVLAMSL GFAKEPFPVK SGACGTVVRN AEMKILDPDT GDSLPRNKPG
401: EICIRGNQIM KGYLNDPLAT ASTIDKDGWL HTGDVGFIDD DDELFIVDRL KELIKYKGFQ VAPAELESLL IGHPEINDVA VVAMKEEDAG EVPVAFVVRS
501: KDSNISEDEI KQFVSKQVVF YKRINKVFFT DSIPKAPSGK ILRKDLRARL ANGLMN

Arabidopsis Description

4CL2Cinnamyl alcohol dehydrogenase [Source:UniProtKB/TrEMBL;Acc:B1GUZ3]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.