Factsheet for Solyc07g008360.1.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

cytosol 1
vacuole 1
peroxisome 3
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400051216	Potato	peroxisome	95.95	95.45
VIT_11s0052g01090.t01	Wine grape	peroxisome	72.36	75.0
Solyc06g068650.2.1	Tomato	peroxisome	71.13	74.4
KRH02884	Soybean	peroxisome	70.42	73.13
Solyc03g117870.2.1	Tomato	plastid	69.37	72.29
GSMUA_Achr9P22840_001	Banana	peroxisome	48.59	72.25
VIT_11s0052g01110.t01	Wine grape	peroxisome	68.49	72.17
KRH02885	Soybean	peroxisome	67.78	71.83
GSMUA_Achr4P12590_001	Banana	peroxisome	61.8	71.78
GSMUA_AchrUn_...	Banana	peroxisome	64.96	71.24
GSMUA_Achr7P05070_001	Banana	peroxisome	61.62	70.99
GSMUA_Achr1P23450_001	Banana	peroxisome	64.79	70.77
GSMUA_Achr4P05820_001	Banana	peroxisome	64.44	70.11
Solyc12g042460.1.1	Tomato	peroxisome	65.85	68.25
EER90150	Sorghum	peroxisome	61.8	63.02
TraesCS2B01G171200.1	Wheat	peroxisome	59.51	62.59
TraesCS2D01G150400.1	Wheat	peroxisome	59.51	62.59
Os08t0448000-01	Rice	peroxisome	59.33	62.52
Os02t0177600-01	Rice	plasma membrane	60.56	62.09
TraesCS6A01G151700.1	Wheat	peroxisome	59.68	62.09
Os06t0656500-01	Rice	peroxisome	61.09	62.08
TraesCS6B01G179900.2	Wheat	peroxisome	59.86	62.04
TraesCS2A01G145800.1	Wheat	peroxisome	59.15	61.99
TraesCS7A01G496200.1	Wheat	peroxisome	60.56	61.76
TraesCS6D01G141700.1	Wheat	peroxisome	59.68	61.75
HORVU6Hr1G030390.2	Barley	peroxisome	60.04	61.66
TraesCS7D01G483400.1	Wheat	peroxisome	60.39	61.25
EES04623	Sorghum	peroxisome	59.68	61.08
Zm00001d032103_P001	Maize	peroxisome	58.45	59.82
EES15085	Sorghum	peroxisome	57.92	59.6
HORVU7Hr1G111130.3	Barley	peroxisome, plastid	61.44	59.15
Os08t0245200-01	Rice	extracellular	57.39	57.8
Zm00001d015459_P003	Maize	peroxisome	59.51	57.58
Solyc03g097030.2.1	Tomato	peroxisome	57.04	56.84
EES13602	Sorghum	peroxisome	56.16	55.87
Zm00001d050224_P002	Maize	peroxisome	54.93	55.71
Zm00001d046915_P001	Maize	extracellular	61.62	54.77
HORVU0Hr1G002720.3	Barley	mitochondrion, plastid	38.56	40.11
Solyc11g069050.1.1	Tomato	peroxisome	37.15	39.22
Solyc12g094520.1.1	Tomato	plastid	36.44	37.57
Solyc02g088710.2.1	Tomato	peroxisome	35.74	36.71
Solyc11g007970.1.1	Tomato	peroxisome	35.74	35.93
Solyc08g076300.2.1	Tomato	peroxisome	35.21	34.84
Solyc03g111170.2.1	Tomato	nucleus	33.63	34.6

Protein Annotations

EnsemblPlants:Solyc07g008360.1.1	EnsemblPlantsGene:Solyc07g008360.1	Gene3D:3.30.300.30	Gene3D:3.40.50.12780	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	InterPro:AMP-bd_C	InterPro:AMP-binding_CS	InterPro:AMP-dep_Synth/Lig	PANTHER:PTHR24096
PANTHER:PTHR24096:SF149	PFAM:PF00501	PFAM:PF13193	ScanProsite:PS00455	SEG:seg	SUPFAM:SSF56801
UniParc:UPI000276B401	UniProt:K4CBV5	MapMan:7.8.1.1	MapMan:9.2.1.3	:	:

Description

No Description!

Coordinates

chr7:+:3141411..3145201

Molecular Weight (calculated)

62912.5 Da

IEP (calculated)

6.205

GRAVY (calculated)

-0.021

Length

568 amino acids

Sequence
(BLAST)

001: MEKMINKLEI NYHDHDHDQY IFRSKLPNIY IPNHLPLHKY CFENISKFSS RTCLINSATG VTYTYSDVDL AAKRIALGLH KLGIEQRDII MILLPNSPEF
101: VFSFLGASFR GAISTTANPF YTPSEITKQA KASNAKLIVT QSCYVDKIKR YAEENRVKIV CVDDSLPLPD GCLSFAELLL TTTHPSDENN SNDDNIILSD
201: SVKILPDDVV ALPYSSGTTG LPKGVMLTHK GLVTSVAQQV DGENPNLYFH SEDVIMCVLP LFHIYSLNSI LLCGLRVGAT ILIMQKFEIK GLMELVEKYK
301: VTIAPFVPPI VLAIAKSPLV DKYDLSSIRM IMSGAAPMGK ELEDTVRAKL PNAILGQGYG MTEAGPVLSM CLAFAKQQFD VKSGSCGTVV RNAEMKIIDT
401: NTGTLLPRNH AGEICIRGDQ IMKGYLNNPK ATEETIDKEG WLHTGDIGYI DDDDQVFIID RLKELIKYKG YQVAPAELEA MLISHPNIID AAVVPMKDEV
501: AGEVPIAFVV KANGSNINEE EIKQYVSQQV IFYKRLNRVF FVEEIPKAPS GKILRKDLKA KLAADLAS

Best Arabidopsis Sequence Match ( AT1G51680.1 )
(BLAST)

001: MAPQEQAVSQ VMEKQSNNNN SDVIFRSKLP DIYIPNHLSL HDYIFQNISE FATKPCLING PTGHVYTYSD VHVISRQIAA NFHKLGVNQN DVVMLLLPNC
101: PEFVLSFLAA SFRGATATAA NPFFTPAEIA KQAKASNTKL IITEARYVDK IKPLQNDDGV VIVCIDDNES VPIPEGCLRF TELTQSTTEA SEVIDSVEIS
201: PDDVVALPYS SGTTGLPKGV MLTHKGLVTS VAQQVDGENP NLYFHSDDVI LCVLPMFHIY ALNSIMLCGL RVGAAILIMP KFEINLLLEL IQRCKVTVAP
301: MVPPIVLAIA KSSETEKYDL SSIRVVKSGA APLGKELEDA VNAKFPNAKL GQGYGMTEAG PVLAMSLGFA KEPFPVKSGA CGTVVRNAEM KIVDPDTGDS
401: LSRNQPGEIC IRGHQIMKGY LNNPAATAET IDKDGWLHTG DIGLIDDDDE LFIVDRLKEL IKYKGFQVAP AELEALLIGH PDITDVAVVA MKEEAAGEVP
501: VAFVVKSKDS ELSEDDVKQF VSKQVVFYKR INKVFFTESI PKAPSGKILR KDLRAKLANG L

Arabidopsis Description

4CL14-coumarate-CoA ligase 1 [Source:UniProtKB/TrEMBL;Acc:A0A1P8SNN0]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.