Factsheet for HORVU6Hr1G030390.2

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

cytosol 2
extracellular 1
peroxisome 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G179900.2	Wheat	peroxisome	96.93	97.81
TraesCS6A01G151700.1	Wheat	peroxisome	96.38	97.62
TraesCS6D01G141700.1	Wheat	peroxisome	96.56	97.27
Os02t0177600-01	Rice	plasma membrane	86.44	86.28
EES04623	Sorghum	peroxisome	85.53	85.23
Zm00001d015459_P003	Maize	peroxisome	84.81	79.9
HORVU7Hr1G111130.3	Barley	peroxisome, plastid	81.19	76.1
GSMUA_Achr9P22840_001	Banana	peroxisome	50.63	73.3
GSMUA_Achr4P12590_001	Banana	peroxisome	63.47	71.78
GSMUA_Achr1P23450_001	Banana	peroxisome	67.45	71.73
GSMUA_AchrUn_...	Banana	peroxisome	67.09	71.62
GSMUA_Achr7P05070_001	Banana	peroxisome	63.11	70.79
GSMUA_Achr4P05820_001	Banana	peroxisome	66.73	70.69
CDY53918	Canola	peroxisome	23.69	70.05
CDY32418	Canola	peroxisome	22.24	67.21
Solyc06g068650.2.1	Tomato	peroxisome	64.74	65.93
PGSC0003DMT400074444	Potato	peroxisome	64.38	65.56
VIT_11s0052g01090.t01	Wine grape	peroxisome	64.74	65.33
PGSC0003DMT400036886	Potato	peroxisome	64.38	65.32
Solyc03g117870.2.1	Tomato	plastid	64.2	65.14
VIT_11s0052g01110.t01	Wine grape	peroxisome	61.84	63.45
KRH02885	Soybean	peroxisome	61.3	63.25
KRH02884	Soybean	peroxisome	62.21	62.89
CDY19568	Canola	peroxisome	62.57	62.68
Bra031266.1-P	Field mustard	peroxisome	62.39	62.5
KRH09616	Soybean	mitochondrion, peroxisome	60.76	62.45
CDY43921	Canola	peroxisome	62.21	62.43
AT3G21240.1	Thale cress	peroxisome	62.75	62.41
CDX87831	Canola	peroxisome	62.03	62.25
AT1G51680.1	Thale cress	peroxisome	62.93	62.03
KRH23700	Soybean	peroxisome	61.3	61.97
Bra030429.1-P	Field mustard	peroxisome	61.84	61.96
PGSC0003DMT400051216	Potato	peroxisome	62.75	60.77
Solyc12g042460.1.1	Tomato	peroxisome	59.49	60.04
Solyc07g008360.1.1	Tomato	peroxisome	61.66	60.04
PGSC0003DMT400037485	Potato	peroxisome	58.95	59.49
HORVU0Hr1G018190.2	Barley	peroxisome	60.22	58.52
CDY48875	Canola	mitochondrion, plastid, vacuole	45.21	56.31
KRH02886	Soybean	peroxisome, plastid	57.32	56.21
CDY19570	Canola	peroxisome	55.52	54.92
Bra031265.1-P	Field mustard	peroxisome	55.15	54.56
AT3G21230.1	Thale cress	peroxisome	56.24	54.56
CDY06431	Canola	peroxisome	54.43	54.43
Bra031263.1-P	Field mustard	peroxisome	53.89	53.89
CDY68920	Canola	peroxisome	53.89	53.89
CDX82208	Canola	peroxisome	55.7	53.85
Bra001819.1-P	Field mustard	peroxisome	55.33	53.31
CDY32416	Canola	peroxisome	55.15	53.14
Bra001820.1-P	Field mustard	peroxisome	55.7	52.65
KRH19011	Soybean	peroxisome	52.8	51.96
HORVU4Hr1G072130.2	Barley	mitochondrion, peroxisome	20.43	49.56
CDY06435	Canola	vacuole	36.89	45.84
CDY65966	Canola	peroxisome	26.94	42.21
CDY71190	Canola	peroxisome	27.85	41.62
HORVU0Hr1G002720.3	Barley	mitochondrion, plastid	40.69	41.21
HORVU2Hr1G066630.1	Barley	cytosol, mitochondrion, peroxisome, plastid	32.37	39.69
HORVU4Hr1G081940.3	Barley	peroxisome	35.8	36.0
HORVU4Hr1G012660.1	Barley	peroxisome	32.55	33.27
HORVU4Hr1G012680.8	Barley	peroxisome	33.27	33.03
HORVU4Hr1G012630.3	Barley	peroxisome	33.45	32.23
HORVU1Hr1G051190.2	Barley	peroxisome	36.17	31.45
HORVU3Hr1G089000.2	Barley	peroxisome, plastid	33.09	31.23
HORVU3Hr1G100420.4	Barley	peroxisome, plastid	31.83	30.34
HORVU4Hr1G072150.1	Barley	peroxisome	25.86	25.67

Protein Annotations

Gene3D:3.30.300.30	Gene3D:3.40.50.12780	MapMan:7.8.1.1	MapMan:9.2.1.3	InterPro:AMP-bd_C	InterPro:AMP-binding_CS
InterPro:AMP-dep_Synth/Lig	ncoils:Coil	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152
GO:GO:0016207	EnsemblPlantsGene:HORVU6Hr1G030390	EnsemblPlants:HORVU6Hr1G030390.2	UniProt:M0WVM2	PFAM:PF00501	PFAM:PF13193
ScanProsite:PS00455	PANTHER:PTHR24096	PANTHER:PTHR24096:SF149	SUPFAM:SSF56801	UniParc:UPI000295F986	SEG:seg

Description

No Description!

Coordinates

chrchr6H:-:126211487..126217428

Molecular Weight (calculated)

59282.9 Da

IEP (calculated)

5.110

GRAVY (calculated)

0.102

Length

553 amino acids

Sequence
(BLAST)

001: MGSVPEETVV AAAPAAAEEV VFRSRLPDIE IPNEQTLQSY CFAKMAEVGS RPCIIDGQTG ASYTYAEVES LSRRAAAGLR RMGVGKGDVV MNLLRNCPEF
101: AFSFLGAARL GAATTTANPF YTPHEIHRQA DAAGAMLIVT EACAVDKVLE YAAAKGLPVV TVDGKRDGCV EFAELIAGEE LPQAEEAGIH PDDVVALPYS
201: SGTTGLPKGV MLTHRSLITS VAQQVDGENP NLYFRKEDVL LCLLPLFHIY SLNSVLLAGL RAGSAMVIMR KFDIGALVEL VRAHGITVAP FVPPIVVEIA
301: KSPQVTAGDL ASIRMVMSGA APMGKELQDA FMAKIPNAVL GQGYGMTEAG PVLAMCLAFA KEPFKVKSGS CGTVVRNAGL KIVDPDTGAS LGRNQPGEIC
401: IRGEQIMKGY LNDPESTKNT IDKDGWLHTG DIGIVDDDDE IFIVDRLKEI IKYKGFQVAP AELEALLITH PEIKDAAVVS LKDDLAGEVP IAFVMRIEGS
501: EITEDDIKKF VAKEVVFYKR IHKVFFTDSI PKNPSGKILR KDLRARLAAG IPS

Best Arabidopsis Sequence Match ( AT1G51680.1 )
(BLAST)

001: MAPQEQAVSQ VMEKQSNNNN SDVIFRSKLP DIYIPNHLSL HDYIFQNISE FATKPCLING PTGHVYTYSD VHVISRQIAA NFHKLGVNQN DVVMLLLPNC
101: PEFVLSFLAA SFRGATATAA NPFFTPAEIA KQAKASNTKL IITEARYVDK IKPLQNDDGV VIVCIDDNES VPIPEGCLRF TELTQSTTEA SEVIDSVEIS
201: PDDVVALPYS SGTTGLPKGV MLTHKGLVTS VAQQVDGENP NLYFHSDDVI LCVLPMFHIY ALNSIMLCGL RVGAAILIMP KFEINLLLEL IQRCKVTVAP
301: MVPPIVLAIA KSSETEKYDL SSIRVVKSGA APLGKELEDA VNAKFPNAKL GQGYGMTEAG PVLAMSLGFA KEPFPVKSGA CGTVVRNAEM KIVDPDTGDS
401: LSRNQPGEIC IRGHQIMKGY LNNPAATAET IDKDGWLHTG DIGLIDDDDE LFIVDRLKEL IKYKGFQVAP AELEALLIGH PDITDVAVVA MKEEAAGEVP
501: VAFVVKSKDS ELSEDDVKQF VSKQVVFYKR INKVFFTESI PKAPSGKILR KDLRAKLANG L

Arabidopsis Description

4CL14-coumarate-CoA ligase 1 [Source:UniProtKB/TrEMBL;Acc:A0A1P8SNN0]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.