Factsheet for HORVU2Hr1G066630.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, peroxisome, plastid, cytosol

Predictor Summary:

mitochondrion 1
plastid 1
cytosol 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion, peroxisome, plastid
Any Predictor:	cytosol, mitochondrion, plastid
MultiLoc:	mitochondrion
Predotar:	plastid
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU1Hr1G042510.2	endoplasmic reticulum
HORVU5Hr1G000690.2	endoplasmic reticulum

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G62940.1	HORVU1Hr1G042510.2	AT1G02050.1	23632852
AT1G62940.1	HORVU1Hr1G042510.2	AT1G02050.1	23632852
AT1G62940.1	HORVU5Hr1G000690.2	AT4G34850.1	23632852
AT1G62940.1	HORVU5Hr1G000690.2	AT4G34850.1	23632852

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G291100.1	Wheat	plastid	99.33	72.37
TraesCS2A01G272900.1	Wheat	plastid	99.11	72.1
TraesCS2D01G272200.1	Wheat	plastid	98.89	72.05
Os04t0310800-01	Rice	peroxisome	85.37	69.37
Zm00001d003702_P001	Maize	plastid	88.25	65.25
EER99996	Sorghum	plastid	86.7	64.63
GSMUA_Achr6P36020_001	Banana	peroxisome	66.52	60.61
AT1G62940.1	Thale cress	peroxisome	68.51	57.01
CDY39816	Canola	peroxisome	68.07	56.85
VIT_01s0010g03720.t01	Wine grape	peroxisome	69.18	56.22
KRH46374	Soybean	peroxisome	66.74	54.43
KRG98485	Soybean	peroxisome	66.52	54.25
Solyc02g088710.2.1	Tomato	peroxisome	66.3	54.07
HORVU4Hr1G072130.2	Barley	mitochondrion, peroxisome	22.39	44.3
KXG26308	Sorghum	peroxisome	51.22	42.39
Zm00001d039274_P003	Maize	peroxisome	87.36	39.09
HORVU6Hr1G030390.2	Barley	peroxisome	39.69	32.37
HORVU0Hr1G018190.2	Barley	peroxisome	39.91	31.63
HORVU4Hr1G081940.3	Barley	peroxisome	38.36	31.45
HORVU7Hr1G111130.3	Barley	peroxisome, plastid	40.35	30.85
HORVU4Hr1G012680.8	Barley	peroxisome	37.69	30.52
HORVU4Hr1G012660.1	Barley	peroxisome	36.14	30.13
HORVU3Hr1G089000.2	Barley	peroxisome, plastid	37.92	29.18
HORVU3Hr1G100420.4	Barley	peroxisome, plastid	36.81	28.62
HORVU4Hr1G012630.3	Barley	peroxisome	35.92	28.22
HORVU1Hr1G051190.2	Barley	peroxisome	37.47	26.57
HORVU0Hr1G002720.3	Barley	mitochondrion, plastid	28.38	23.44
HORVU4Hr1G072150.1	Barley	peroxisome	26.39	21.36
Bra036646.1-P	Field mustard	peroxisome	68.07	20.76
CDY03253	Canola	peroxisome	67.63	19.77

Protein Annotations

MapMan:21.8.1.2	Gene3D:3.30.300.30	Gene3D:3.40.50.12780	UniProt:A0A287I9J4	InterPro:AMP-bd_C	InterPro:AMP-binding_CS
InterPro:AMP-dep_Synth/Lig	GO:GO:0001676	GO:GO:0003674	GO:GO:0003824	GO:GO:0004467	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005783	GO:GO:0006629	GO:GO:0007275
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009653	GO:GO:0009987	GO:GO:0016043
GO:GO:0031956	GO:GO:0046949	GO:GO:0080110	EnsemblPlantsGene:HORVU2Hr1G066630	EnsemblPlants:HORVU2Hr1G066630.1	PFAM:PF00501
PFAM:PF13193	ScanProsite:PS00455	PANTHER:PTHR24096	PANTHER:PTHR24096:SF312	SUPFAM:SSF56801	UniParc:UPI000B485D94
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chrchr2H:+:462131161..462133118

Molecular Weight (calculated)

48530.0 Da

IEP (calculated)

5.650

GRAVY (calculated)

0.144

Length

451 amino acids

Sequence
(BLAST)

001: MAAGAVFSGV NPRSLAAEIR KQVEDSEARL VVANEVAYDK VKDVGVPVIG IGEQGLMAGA ISWDELLAAA DRTGPPVVPL EPVQQSDLCA LPYSSGTTGV
101: SKGVMLSHRN LVSNLCSSMF AVGTELLGQV VTLGLMPFFH IYGITGICCA TLRHKGTVVV MDRFDLRTFL GALVAHRVMF APVVPPVMLA MVKNPIADEF
201: DLSGLALKSV MTAAAPLAPD LLAAFQRKFP GVQVEEAYGL TEHSCITLTH AGDDPEKGHI AKKNSVGFIL PNLEVKFVDP DTGRSLAKNT PGELCVRSQC
301: VMQGYYRKKE ETERTIDANG WLHTGDIGYI DDDGDVFIVD RIKELIKYKG FQVAPAELEA ILLSHPSVED AAVFGLPDEE AGEIPVSCVV RRSGAAESEA
401: DIMAYVAARV ASYKKLRMLH LVDAIPKSVS GKILRRQLRD EFINMIKPAA A

Best Arabidopsis Sequence Match ( AT1G62940.1 )
(BLAST)

001: MESQKQEDNE YIFRSLYPSV PIPDKLTLPE FVLQGVEEYT ENVAFVEAVT GKAVTYGDVV RDTKRLAKAL TSLGLRKGQV MVVVLPNVAE YGIIALGIMS
101: AGGVFSGANP TALVSEIKKQ VEASGARGII TDATNYEKVK SLGLPVIVLG EEKIEGAVNW KDLLEAGDKC GDTDNEEILQ TDLCALPFSS GTTGLQKGVM
201: LTHRNLIANL CSTLFGVRSE MIGQIVTLGL IPFFHIYGIV GICCATMKNK GKVVAMSRYD LRIFLNALIA HEVSFAPIVP PIILNLVKNP IVDEFDLSKL
301: KLQSVMTAAA PLAPELLTAF EAKFPNVQVQ EAYGLTEHSC ITLTHGDPEK GQGIAKRNSV GFILPNLEVK FIDPDTGRSL PKNTSGELCV RSQCVMQGYF
401: MNKEETDKTI DEQGWLHTGD IGYIDDDGDI FIVDRIKELI KYKGFQVAPA ELEAILLTHP SVEDVAVVPL PDEEAGEIPA ACVVINPKAT EKEEDILNFV
501: AANVAHYKKV RAVHFVDSIP KSLSGKIMRR LLRDKILSIN KK

Arabidopsis Description

4CLL14-coumarate--CoA ligase-like 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LQ12]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.