Subcellular Localization
min:
: max
Winner_takes_all: peroxisome
Predictor Summary:
Predictor Summary:
- nucleus 1
- peroxisome 2
- mitochondrion 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| CDX69091 | endoplasmic reticulum |
| CDX72506 | endoplasmic reticulum |
| CDX75466 | endoplasmic reticulum |
| CDX90022 | |
| CDX93339 | endoplasmic reticulum |
| CDY15188 | |
| CDY17490 | endoplasmic reticulum |
| CDY18415 | endoplasmic reticulum |
| CDY34811 | endoplasmic reticulum |
| CDY38002 | |
| CDY40656 | endoplasmic reticulum |
| CDY58814 | endoplasmic reticulum |
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY39816 | Canola | peroxisome | 34.67 | 99.07 |
| Bra036646.1-P | Field mustard | peroxisome | 89.37 | 93.24 |
| AT1G62940.1 | Thale cress | peroxisome | 32.73 | 93.17 |
| VIT_01s0010g03720.t01 | Wine grape | peroxisome | 26.12 | 72.61 |
| KRH46374 | Soybean | peroxisome | 25.28 | 70.52 |
| Solyc02g088710.2.1 | Tomato | peroxisome | 25.08 | 69.98 |
| GSMUA_Achr6P36020_001 | Banana | peroxisome | 22.42 | 69.9 |
| KRG98485 | Soybean | peroxisome | 24.89 | 69.44 |
| HORVU2Hr1G066630.1 | Barley | cytosol, mitochondrion, peroxisome, plastid | 19.77 | 67.63 |
| Os04t0310800-01 | Rice | peroxisome | 22.68 | 63.06 |
| EER99996 | Sorghum | plastid | 23.91 | 60.99 |
| TraesCS2A01G272900.1 | Wheat | plastid | 24.37 | 60.65 |
| TraesCS2B01G291100.1 | Wheat | plastid | 24.3 | 60.58 |
| TraesCS2D01G272200.1 | Wheat | plastid | 24.24 | 60.42 |
| Zm00001d003702_P001 | Maize | plastid | 23.53 | 59.51 |
| CDY45731 | Canola | peroxisome | 5.06 | 50.65 |
| CDY53918 | Canola | peroxisome | 6.03 | 49.73 |
| CDY32418 | Canola | peroxisome | 5.64 | 47.54 |
| Zm00001d039274_P003 | Maize | peroxisome | 27.87 | 42.66 |
| KXG26308 | Sorghum | peroxisome | 14.0 | 39.63 |
| CDY45730 | Canola | vacuole | 11.6 | 39.0 |
| CDY71478 | Canola | vacuole | 11.41 | 38.34 |
| CDX96638 | Canola | peroxisome | 13.03 | 38.14 |
| CDY43921 | Canola | peroxisome | 13.61 | 38.11 |
| CDY31472 | Canola | peroxisome | 12.64 | 37.94 |
| CDY29527 | Canola | peroxisome | 12.96 | 37.74 |
| CDX87831 | Canola | peroxisome | 13.42 | 37.57 |
| CDY19568 | Canola | peroxisome | 13.29 | 37.14 |
| CDY46375 | Canola | peroxisome | 12.77 | 36.35 |
| CDY39155 | Canola | peroxisome | 12.7 | 36.16 |
| CDY07442 | Canola | peroxisome | 12.9 | 35.79 |
| CDY68920 | Canola | peroxisome | 12.77 | 35.62 |
| CDY48875 | Canola | mitochondrion, plastid, vacuole | 10.24 | 35.59 |
| CDY39293 | Canola | peroxisome | 12.83 | 35.55 |
| CDX96633 | Canola | plastid | 12.64 | 35.26 |
| CDY33631 | Canola | plastid | 12.64 | 35.26 |
| CDY06431 | Canola | peroxisome | 12.57 | 35.08 |
| CDY39153 | Canola | peroxisome | 12.25 | 35.06 |
| CDY33627 | Canola | peroxisome | 12.64 | 35.01 |
| CDX96636 | Canola | golgi, vacuole | 8.68 | 34.99 |
| CDY46376 | Canola | peroxisome | 12.12 | 34.69 |
| CDX82208 | Canola | peroxisome | 12.77 | 34.44 |
| CDY19570 | Canola | peroxisome | 12.44 | 34.35 |
| CDY31883 | Canola | plastid | 12.05 | 34.25 |
| CDY32416 | Canola | peroxisome | 12.7 | 34.15 |
| CDY33628 | Canola | plastid | 12.12 | 33.88 |
| CDY01369 | Canola | plastid | 11.86 | 33.7 |
| CDX96637 | Canola | plastid | 11.99 | 33.45 |
| CDY01370 | Canola | peroxisome, plastid | 11.86 | 33.27 |
| CDX78914 | Canola | peroxisome, plastid | 12.31 | 33.1 |
| CDY33629 | Canola | golgi, vacuole | 8.68 | 31.68 |
| CDY31474 | Canola | peroxisome | 11.73 | 31.21 |
| CDY06435 | Canola | vacuole | 7.97 | 27.64 |
| CDY71190 | Canola | peroxisome | 6.22 | 25.95 |
| CDX99401 | Canola | peroxisome | 10.95 | 25.3 |
| CDY65966 | Canola | peroxisome | 5.7 | 24.93 |
| CDX78913 | Canola | cytosol | 0.0 | 0.0 |
Protein Annotations
| Gene3D:1.20.5.340 | Gene3D:1.20.58.1570 | MapMan:20.2.2.2.4 | MapMan:21.8.1.2 | Gene3D:3.30.300.30 | Gene3D:3.40.50.12780 |
| GO:A0A078EUI4 | InterPro:AMP-bd_C | InterPro:AMP-dep_Synth/Lig | EnsemblPlants:CDY03253 | ProteinID:CDY03253 | ProteinID:CDY03253.1 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005856 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016043 |
| GO:GO:0030036 | EnsemblPlantsGene:GSBRNA2T00115789001 | PFAM:PF00501 | PFAM:PF13193 | PANTHER:PTHR12902 | PANTHER:PTHR12902:SF12 |
| InterPro:SCAR/WAVE_fam | SUPFAM:SSF56801 | TMHMM:TMhelix | UniParc:UPI0004EF2005 | SEG:seg | : |
Description
BnaC09g10950D
Coordinates
chrLK031942:-:58473..67418
Molecular Weight (calculated)
169389.0 Da
IEP (calculated)
4.426
GRAVY (calculated)
-0.425
Length
1543 amino acids
Sequence
(BLAST)
(BLAST)
0001: MTLTRYQIRN EYGLADKEIY SDKEDAEVLL EGSSMAGLVG LLRQLGDLAE FAGEVFNNLH EELMTTAARG QGLAVRLQQL EAEVPNSVEI PILSQTDHST
0101: FFYDPGKHRI DRSCNISGLE WHSTLKTEEH LISPHKLPHC IIDSYEECRG PPQLYLLDKF DVDGSGSCLK RYSDSSLLKT LAASQLSKDE RPSKPKKKAS
0201: HISNGERTLG DSQTSHAKLN QLFLMDHAED PEITVKLKRR HLNVPPPINS SYGTGYMEKF VKNSLPYCER VHETLDQSSS AMETDEVTTC NVRVDLSTPS
0301: LVYPSNGETR KEREMEAIAD DEREGGGAIV CVERSSSVNN DTYAPPASTD TEADKDNVTQ TGVLASNVLH HSTEEGVSEG GTKDVQTNDV EDDHSQHIFS
0401: VETGSEISLT GLVEDQFSSI TNQETEKEPD CHQIQNQHIS TFDNFEDLSL DVDAVRDSAV PREDEIISQD GYSVNTEDAG HVSTLEISSE VETMMLDTPK
0501: DVHTGNITPS ASSCQEDTLA DSDVAEISSD SGKEDPQPMS IIADGSSELE VQILDTQSGG TVFAGDNQAR LNDKVSETVP EVDLETIGDA HECLPGTQEC
0601: FSPEYHIQTH SQGGQESQSE TDSENTTAEA AAESLPPQDV PLGVQCSTSE ETLTCNENEA EVEALNAPHQ GDITSLNGNY IPESVLSMDP TDQENCLDVP
0701: MAPFSTSLHV TPQEDLEITP PLPPLPPTQW WMGKLVDSVK QTETQFSPVP YNGNNSFYIH RDENTHNGLV QGTEAQDQSE ASVTADESHN TDVDPVEAVL
0801: ISAKTTLNEQ SKATEEEQYH SESVAWESLL TPEATPEAES IQGLEALEWF SQNLKEHTNP NLTKLEEKPQ LDHPLEPPGG TEGDNKSYEK NEKVEKLPRD
0901: KESLVLGIDR SMLRKVSERN RTQLGARVDE NDSLLEIIRS KSFNLRPADA SVRHNFQVAA PITNLKVAAI LEKANSLRHA MAGSDDDHDS DSWKLKSNST
1001: HLKMEARKQD NEHIFRSLYP SVPIPDKLTL PEFVLQGVEE FTENVAFVEA VTGKSVTYGD VVRDTKRLAK ALTSLGLRKG QVMVVVLPNV AEYGIIALGI
1101: MSAGGVFSGA NPTALVSEIK KQVEASGASG IITDSTNFEK VKALGLPVIV LGEEKIEGAV NWKDLLEAGD RSGDNNREKI LQTDLCALPF SSGTTGLQKG
1201: VMLTHRNLIA NLCSTLFSVR SEMIGQIVTL GLIPFFHIYG IVGICCATMK NKGKVVAMSR YDLRLFLNAL ITHEVLFAPI VPPIILNLVK NPIVDEFDLS
1301: KLKLRSVMTA AAPLAPELLT AFEAKFPNVQ AYGLTEHSCI TLTHGDPDKG QGIAKRNSVG FILPNLEVKF IDPDTGRSLP KNTSGELCVR SQCVMQGYFE
1401: NKEETEKTID EEGWLHTGDV GYIDDDGDIF IVDRIKELIK YKGFQVAPAE LEAILLTHPS VEDVAVVPLP DEEAGEIPVA CVVMNPKAKE KEEDILSFVA
1501: ANVAHYKKIR AVHFVDSIPK SLSGKIMRRL LRDNILSIKK TLF
0101: FFYDPGKHRI DRSCNISGLE WHSTLKTEEH LISPHKLPHC IIDSYEECRG PPQLYLLDKF DVDGSGSCLK RYSDSSLLKT LAASQLSKDE RPSKPKKKAS
0201: HISNGERTLG DSQTSHAKLN QLFLMDHAED PEITVKLKRR HLNVPPPINS SYGTGYMEKF VKNSLPYCER VHETLDQSSS AMETDEVTTC NVRVDLSTPS
0301: LVYPSNGETR KEREMEAIAD DEREGGGAIV CVERSSSVNN DTYAPPASTD TEADKDNVTQ TGVLASNVLH HSTEEGVSEG GTKDVQTNDV EDDHSQHIFS
0401: VETGSEISLT GLVEDQFSSI TNQETEKEPD CHQIQNQHIS TFDNFEDLSL DVDAVRDSAV PREDEIISQD GYSVNTEDAG HVSTLEISSE VETMMLDTPK
0501: DVHTGNITPS ASSCQEDTLA DSDVAEISSD SGKEDPQPMS IIADGSSELE VQILDTQSGG TVFAGDNQAR LNDKVSETVP EVDLETIGDA HECLPGTQEC
0601: FSPEYHIQTH SQGGQESQSE TDSENTTAEA AAESLPPQDV PLGVQCSTSE ETLTCNENEA EVEALNAPHQ GDITSLNGNY IPESVLSMDP TDQENCLDVP
0701: MAPFSTSLHV TPQEDLEITP PLPPLPPTQW WMGKLVDSVK QTETQFSPVP YNGNNSFYIH RDENTHNGLV QGTEAQDQSE ASVTADESHN TDVDPVEAVL
0801: ISAKTTLNEQ SKATEEEQYH SESVAWESLL TPEATPEAES IQGLEALEWF SQNLKEHTNP NLTKLEEKPQ LDHPLEPPGG TEGDNKSYEK NEKVEKLPRD
0901: KESLVLGIDR SMLRKVSERN RTQLGARVDE NDSLLEIIRS KSFNLRPADA SVRHNFQVAA PITNLKVAAI LEKANSLRHA MAGSDDDHDS DSWKLKSNST
1001: HLKMEARKQD NEHIFRSLYP SVPIPDKLTL PEFVLQGVEE FTENVAFVEA VTGKSVTYGD VVRDTKRLAK ALTSLGLRKG QVMVVVLPNV AEYGIIALGI
1101: MSAGGVFSGA NPTALVSEIK KQVEASGASG IITDSTNFEK VKALGLPVIV LGEEKIEGAV NWKDLLEAGD RSGDNNREKI LQTDLCALPF SSGTTGLQKG
1201: VMLTHRNLIA NLCSTLFSVR SEMIGQIVTL GLIPFFHIYG IVGICCATMK NKGKVVAMSR YDLRLFLNAL ITHEVLFAPI VPPIILNLVK NPIVDEFDLS
1301: KLKLRSVMTA AAPLAPELLT AFEAKFPNVQ AYGLTEHSCI TLTHGDPDKG QGIAKRNSVG FILPNLEVKF IDPDTGRSLP KNTSGELCVR SQCVMQGYFE
1401: NKEETEKTID EEGWLHTGDV GYIDDDGDIF IVDRIKELIK YKGFQVAPAE LEAILLTHPS VEDVAVVPLP DEEAGEIPVA CVVMNPKAKE KEEDILSFVA
1501: ANVAHYKKIR AVHFVDSIPK SLSGKIMRRL LRDNILSIKK TLF
001: MESQKQEDNE YIFRSLYPSV PIPDKLTLPE FVLQGVEEYT ENVAFVEAVT GKAVTYGDVV RDTKRLAKAL TSLGLRKGQV MVVVLPNVAE YGIIALGIMS
101: AGGVFSGANP TALVSEIKKQ VEASGARGII TDATNYEKVK SLGLPVIVLG EEKIEGAVNW KDLLEAGDKC GDTDNEEILQ TDLCALPFSS GTTGLQKGVM
201: LTHRNLIANL CSTLFGVRSE MIGQIVTLGL IPFFHIYGIV GICCATMKNK GKVVAMSRYD LRIFLNALIA HEVSFAPIVP PIILNLVKNP IVDEFDLSKL
301: KLQSVMTAAA PLAPELLTAF EAKFPNVQVQ EAYGLTEHSC ITLTHGDPEK GQGIAKRNSV GFILPNLEVK FIDPDTGRSL PKNTSGELCV RSQCVMQGYF
401: MNKEETDKTI DEQGWLHTGD IGYIDDDGDI FIVDRIKELI KYKGFQVAPA ELEAILLTHP SVEDVAVVPL PDEEAGEIPA ACVVINPKAT EKEEDILNFV
501: AANVAHYKKV RAVHFVDSIP KSLSGKIMRR LLRDKILSIN KK
101: AGGVFSGANP TALVSEIKKQ VEASGARGII TDATNYEKVK SLGLPVIVLG EEKIEGAVNW KDLLEAGDKC GDTDNEEILQ TDLCALPFSS GTTGLQKGVM
201: LTHRNLIANL CSTLFGVRSE MIGQIVTLGL IPFFHIYGIV GICCATMKNK GKVVAMSRYD LRIFLNALIA HEVSFAPIVP PIILNLVKNP IVDEFDLSKL
301: KLQSVMTAAA PLAPELLTAF EAKFPNVQVQ EAYGLTEHSC ITLTHGDPEK GQGIAKRNSV GFILPNLEVK FIDPDTGRSL PKNTSGELCV RSQCVMQGYF
401: MNKEETDKTI DEQGWLHTGD IGYIDDDGDI FIVDRIKELI KYKGFQVAPA ELEAILLTHP SVEDVAVVPL PDEEAGEIPA ACVVINPKAT EKEEDILNFV
501: AANVAHYKKV RAVHFVDSIP KSLSGKIMRR LLRDKILSIN KK
Arabidopsis Description
4CLL14-coumarate--CoA ligase-like 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LQ12]
SUBAcon: [peroxisome]
SUBAcon: [peroxisome]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.