CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

plastid 1
peroxisome 3
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	peroxisome, plastid
BaCelLo:	plastid
MultiLoc:	peroxisome
PProwler:	peroxisome
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY01370	Canola	peroxisome, plastid	75.34	79.45
AT1G20500.1	Thale cress	plastid	73.79	77.82
CDY31883	Canola	plastid	71.03	75.87
CDY01369	Canola	plastid	70.52	75.32
CDY33628	Canola	plastid	67.07	70.47
CDX96637	Canola	plastid	66.72	69.98
CDX96636	Canola	golgi, vacuole	42.24	63.97
CDY45731	Canola	peroxisome	16.72	62.99
VIT_18s0001g00290.t01	Wine grape	peroxisome	59.31	62.66
CDX96633	Canola	plastid	59.48	62.39
CDY33631	Canola	plastid	59.31	62.21
VIT_18s0001g00280.t01	Wine grape	peroxisome, plastid	57.24	60.47
KRH17509	Soybean	peroxisome, plastid	56.38	59.56
Solyc12g094520.1.1	Tomato	plastid	56.21	59.17
PGSC0003DMT400075394	Potato	peroxisome, plastid	55.86	58.8
CDY33629	Canola	golgi, vacuole	42.41	58.16
GSMUA_Achr8P13230_001	Banana	peroxisome	50.34	58.05
CDX96638	Canola	peroxisome	52.59	57.87
CDY31472	Canola	peroxisome	51.21	57.78
CDY29527	Canola	peroxisome	51.55	56.42
HORVU4Hr1G081940.3	Barley	peroxisome	51.9	54.73
Zm00001d027519_P001	Maize	plasma membrane	51.55	54.27
EER95569	Sorghum	peroxisome	51.72	54.25
TraesCS4D01G323500.1	Wheat	plastid	51.38	54.08
CDY33627	Canola	peroxisome	51.9	54.04
TraesCS5A01G498800.1	Wheat	peroxisome	51.38	53.99
TraesCS4B01G326800.1	Wheat	peroxisome, plastid	51.21	53.8
Os03t0132000-01	Rice	plasma membrane	50.52	53.08
CDY53918	Canola	peroxisome	15.34	47.59
CDY45730	Canola	vacuole	37.59	47.49
CDY71478	Canola	vacuole	37.24	47.06
CDY32418	Canola	peroxisome	13.79	43.72
CDY46375	Canola	peroxisome	38.97	41.7
CDY39155	Canola	peroxisome	38.45	41.14
CDY39153	Canola	peroxisome	36.21	38.96
CDY46376	Canola	peroxisome	36.21	38.96
CDY68920	Canola	peroxisome	35.0	36.71
CDY06431	Canola	peroxisome	34.14	35.8
CDY48875	Canola	mitochondrion, plastid, vacuole	27.07	35.36
CDY43921	Canola	peroxisome	33.1	34.85
CDX87831	Canola	peroxisome	33.1	34.85
CDX78914	Canola	peroxisome, plastid	34.31	34.67
CDY19568	Canola	peroxisome	32.93	34.6
CDY19570	Canola	peroxisome	33.28	34.53
CDX82208	Canola	peroxisome	33.97	34.44
CDY32416	Canola	peroxisome	33.79	34.15
CDY39816	Canola	peroxisome	31.03	33.33
CDY07442	Canola	peroxisome	30.52	31.83
CDY39293	Canola	peroxisome	30.17	31.42
CDY71190	Canola	peroxisome	18.45	28.92
CDX99401	Canola	peroxisome	31.72	27.54
CDY06435	Canola	vacuole	20.69	26.97
CDY65966	Canola	peroxisome	15.17	24.93
CDY03253	Canola	peroxisome	31.21	11.73
CDX78913	Canola	cytosol	0.17	0.56

Protein Annotations

Gene3D:3.30.300.30	Gene3D:3.40.50.12780	MapMan:35.1	GO:A0A078H214	UniProt:A0A078H214	InterPro:AMP-bd_C
InterPro:AMP-binding_CS	InterPro:AMP-dep_Synth/Lig	EnsemblPlants:CDY31474	ProteinID:CDY31474	ProteinID:CDY31474.1	GO:GO:0003674
GO:GO:0003824	GO:GO:0005575	GO:GO:0008150	GO:GO:0008152	GO:GO:0016020	GO:GO:0016021
EnsemblPlantsGene:GSBRNA2T00047748001	PFAM:PF00501	PFAM:PF13193	ScanProsite:PS00455	PANTHER:PTHR24096	PANTHER:PTHR24096:SF186
SUPFAM:SSF56801	TMHMM:TMhelix	UniParc:UPI0004EEBA10	SEG:seg	:	:

Description

BnaC05g15830DBnaC05g15830D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H214]

Coordinates

chrLK032273:-:123862..127424

Molecular Weight (calculated)

64148.0 Da

IEP (calculated)

9.223

GRAVY (calculated)

-0.059

Length

580 amino acids

Sequence
(BLAST)

001: MHYDKERNKR EKKKANVERP SLVDSRSGFC KENSTFYSKR NPISLPASPS LDVTTFISCQ IHRGITAFID ATTGQRLSFS DLWRAVDRVA EWLYSEVGLR
101: RGDVILILSP NSFYIPIVCL AVMSLGAVVT TANTLSTAGE ISKQIADSKP TLAFTTAQLA HKLPAGISIV LTEEEHVEPT GGVRVVGVLF EMMKKEPSGQ
201: RVRDRVNQED TAVMLYSSGT TGASKGVISS HRNLTSYTRP DKNRFVPDLK TFEISFIYMT NIQLKLMELG LICTVPMFHT FGLLMFAMAT VAIGLTVVIL
301: RRFELNDLLA AVEKYRATAL ILAPPVLVVM TNEADIIKEK CDLSSLKKVT CGGAPLSKEV TEGFLKKYPT VHVLQAYALT ESNGGGAYMD MVDSRRYGTV
401: GTLTPDVEAR IVDPNTGRLL GTNQTGELWL KGPSISKGYF KNQEATSETF NLEGWLKTGD LCNIDDDGFL YVVDRLKELI KYIGYQVAPA ELEALLITHR
501: DILDAAVIPF PDKEAGQYPM AYVTRKLGSN LSEKQVIDFI SKQVAPYKKI RKVAFINSIP KTASGKILRK DLIKLPSSKL

Best Arabidopsis Sequence Match ( AT1G20500.1 )
(BLAST)

001: MAYPERSLIV DPRSGFCKSN STFYSKRQPL SLPPNLSRDV TTFISSQPHR GKTAFIDAAT GQCLTFSDLW RAVDRVADCL YHEVGIRRGD VVLILSPNSI
101: FIPVVCLSVM SLGAVFTTAN TLNTSGEISK QIADSNPTLV FTTRQLAPKL PVAISVVLTD DEVYQELTSA IRVVGILSEM VKKEPSGQRV RDRVNQDDTA
201: MMLYSSGTTG PSKGVISSHR NLTAHVARFI SDNLKRDDIF ICTVPMFHTY GLLTFAMGTV ALGSTVVILR RFQLHDMMDA VEKHRATALA LAPPVLVAMI
301: NDADLIKAKY DLSSLKTVRC GGAPLSKEVT EGFLEKYPTV DILQGYALTE SNGGGAFTNS AEESRRYGTA GTLTSDVEAR IVDPNTGRFM GINQTGELWL
401: KGPSISKGYF KNQEATNETI NLEGWLKTGD LCYIDEDGFL FVVDRLKELI KYKGYQVPPA ELEALLITHP DILDAAVIPF PDKEAGQYPM AYVVRKHESN
501: LSEKQVIDFI SKQVAPYKKI RKVSFINSIP KTASGKTLRK DLIKLATSKL

Arabidopsis Description

4CLL44-coumarate--CoA ligase-like 4 [Source:UniProtKB/Swiss-Prot;Acc:P0C5B6]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.