CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

cytosol 1
vacuole 1
peroxisome 4
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d027519_P001	Maize	plasma membrane	94.21	94.56
Os03t0132000-01	Rice	plasma membrane	89.87	90.04
HORVU4Hr1G081940.3	Barley	peroxisome	88.25	88.73
TraesCS5A01G498800.1	Wheat	peroxisome	87.7	87.86
TraesCS4B01G326800.1	Wheat	peroxisome, plastid	87.7	87.86
TraesCS4D01G323500.1	Wheat	plastid	87.34	87.66
GSMUA_Achr8P13230_001	Banana	peroxisome	66.73	73.36
Solyc12g094520.1.1	Tomato	plastid	64.38	64.61
PGSC0003DMT400075394	Potato	peroxisome, plastid	64.38	64.61
KRH17509	Soybean	peroxisome, plastid	64.01	64.48
CDY33631	Canola	plastid	63.83	63.83
Bra016463.1-P	Field mustard	plastid	63.29	63.29
CDX96633	Canola	plastid	63.29	63.29
VIT_18s0001g00290.t01	Wine grape	peroxisome	62.75	63.21
AT1G20510.1	Thale cress	plastid	61.84	62.64
VIT_18s0001g00280.t01	Wine grape	peroxisome, plastid	58.95	59.38
Bra012233.1-P	Field mustard	plastid	57.69	58.86
CDY01369	Canola	plastid	57.69	58.75
CDY31883	Canola	plastid	57.32	58.38
Bra012232.1-P	Field mustard	peroxisome, plastid	57.14	57.56
CDY01370	Canola	peroxisome, plastid	57.14	57.45
AT1G20500.1	Thale cress	plastid	56.96	57.27
CDX96636	Canola	golgi, vacuole	39.6	57.18
CDY29527	Canola	peroxisome	54.07	56.42
CDY31472	Canola	peroxisome	52.26	56.23
Bra016464.1-P	Field mustard	plastid	56.78	55.97
Bra025822.1-P	Field mustard	peroxisome	54.61	55.62
CDY33628	Canola	plastid	55.52	55.62
AT1G20480.1	Thale cress	peroxisome	56.78	55.58
CDX96637	Canola	plastid	55.52	55.52
CDX96638	Canola	peroxisome	51.9	54.46
Bra016466.1-P	Field mustard	peroxisome	53.71	54.2
Bra016465.1-P	Field mustard	plastid	47.56	53.56
AT5G38120.1	Thale cress	plastid	52.44	52.73
CDY31474	Canola	peroxisome	54.25	51.72
CDY33627	Canola	peroxisome	51.9	51.53
CDY33629	Canola	golgi, vacuole	37.43	48.94
AT1G20490.2	Thale cress	peroxisome	38.88	48.1
EES01913	Sorghum	peroxisome, plastid	46.11	45.95
EER97853	Sorghum	peroxisome, plastid	44.12	44.12
OQU91476	Sorghum	peroxisome	43.04	42.73
KXG40154	Sorghum	peroxisome	42.31	42.31
EER98656	Sorghum	peroxisome, plastid	42.13	41.98
KXG38162	Sorghum	peroxisome	41.59	40.85
KXG38810	Sorghum	peroxisome	42.13	40.66
OQU88316	Sorghum	peroxisome, plastid	43.22	39.97
EER90150	Sorghum	peroxisome	37.79	37.52
EES13602	Sorghum	peroxisome	38.7	37.48
EES04623	Sorghum	peroxisome	37.43	37.3
EES15085	Sorghum	peroxisome	37.07	37.14
EES05680	Sorghum	peroxisome	36.35	35.51
EER99996	Sorghum	plastid	37.25	34.05
KXG26308	Sorghum	peroxisome	22.24	22.57

Protein Annotations

MapMan:11.7.1.7	Gene3D:3.30.300.30	Gene3D:3.40.50.12780	EntrezGene:8057422	InterPro:AMP-bd_C	InterPro:AMP-binding_CS
InterPro:AMP-dep_Synth/Lig	UniProt:C5WZV3	EnsemblPlants:EER95569	ProteinID:EER95569	ProteinID:EER95569.1	GO:GO:0003674
GO:GO:0003824	GO:GO:0005575	GO:GO:0008150	GO:GO:0008152	GO:GO:0016020	GO:GO:0016021
PFAM:PF00501	PFAM:PF13193	ScanProsite:PS00455	PANTHER:PTHR24096	PANTHER:PTHR24096:SF186	EnsemblPlantsGene:SORBI_3001G516600
SUPFAM:SSF56801	TMHMM:TMhelix	UniParc:UPI0001A83158	RefSeq:XP_002468571.1	SEG:seg	:

Description

hypothetical protein

Coordinates

chr1:-:78328401..78335084

Molecular Weight (calculated)

59860.8 Da

IEP (calculated)

9.350

GRAVY (calculated)

-0.003

Length

553 amino acids

Sequence
(BLAST)

001: MADRPEVAVD SRSGYCAATR TFRSKRADVP LPADADLDVV RFLASRRHAG VVALIDAATG RRVTFRDLWR AVEGAATALA APPLSLRKGQ VALILSPNSI
101: HFPVAALAAM SLGAVLTTAN PLNTPAEIAK QVADARPVVA FTTRDLLPKL PLGAGLRVVL LEPDRLASDP SSVVATIGEI SATPPDPARR GDRRVTQDDP
201: ATLLYSSGTT GPSKGVVATH RSLISMVQII MTRFRLEGSD KTETFLCTVP MFHVYGLVAF ATGLLGCGAT IVVLSKYELP EMLRSINEYG VTYLPLVPPI
301: LVAMLAHPKP LPLGNLRKVL SGGAPLSKEL IEGFKEKYPQ VEILQGYGLT ESTAIGASTD SAEESRRYGT AGLLSPNTEA KIVDPETGEA LPVNRTGELW
401: IRGPYVMKGY FKNTEATQST LTPDGWLKTG DLCYIDEDGY LFVVDRLKEL IKYKGYQVPP AELEALLLTH SEIQDVAVIP FPDREVGQFP MAYVVRKKGS
501: NLSEREVMEF VAKQVAPYKK VRKVAFVTEI PKNASGKILR KDLIKLATSK SKL

Best Arabidopsis Sequence Match ( AT1G20510.1 )
(BLAST)

001: MASVNSRSGF CNSNSTFYSK RTPIPLPPNP SLDVTTFISS QAHRGRIAFI DASTGQNLTF TELWRAVESV ADCLSEIGIR KGHVVLLLSP NSILFPVVCL
101: SVMSLGAIIT TTNPLNTSNE IAKQIKDSNP VLAFTTSQLL PKISAAAKKL PIVLMDEERV DSVGDVRRLV EMMKKEPSGN RVKERVDQDD TATLLYSSGT
201: TGMSKGVISS HRNLIAMVQT IVNRFGSDDG EQRFICTVPM FHIYGLAAFA TGLLAYGSTI IVLSKFEMHE MMSAIGKYQA TSLPLVPPIL VAMVNGADQI
301: KAKYDLSSMH TVLCGGAPLS KEVTEGFAEK YPTVKILQGY GLTESTGIGA STDTVEESRR YGTAGKLSAS MEGRIVDPVT GQILGPKQTG ELWLKGPSIM
401: KGYFSNEEAT SSTLDSEGWL RTGDLCYIDE DGFIFVVDRL KELIKYKGYQ VAPAELEALL LTHPEITDAA VIPFPDKEVG QFPMAYVVRK TGSSLSEKTI
501: MEFVAKQVAP YKRIRKVAFV SSIPKNPSGK ILRKDLIKIA TSNSKL

Arabidopsis Description

4CLL54-coumarate--CoA ligase-like 5 [Source:UniProtKB/Swiss-Prot;Acc:Q84P21]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.