CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

plastid 1
peroxisome 3
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	cytosol, peroxisome, plastid
BaCelLo:	plastid
MultiLoc:	peroxisome
PProwler:	peroxisome
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra016466.1-P	Field mustard	peroxisome	97.15	93.43
CDY33627	Canola	peroxisome	90.32	85.46
CDY31472	Canola	peroxisome	80.83	82.88
CDY29527	Canola	peroxisome	81.59	81.13
AT1G20480.1	Thale cress	peroxisome	82.54	76.99
CDY45731	Canola	peroxisome	18.6	63.64
CDY33631	Canola	plastid	63.19	60.22
CDX96633	Canola	plastid	62.81	59.86
KRH17509	Soybean	peroxisome, plastid	61.86	59.38
VIT_18s0001g00290.t01	Wine grape	peroxisome	60.72	58.29
CDY01369	Canola	plastid	59.77	58.01
CDY31883	Canola	plastid	59.77	58.01
Solyc12g094520.1.1	Tomato	plastid	59.77	57.17
PGSC0003DMT400075394	Potato	peroxisome, plastid	59.39	56.81
GSMUA_Achr8P13230_001	Banana	peroxisome	53.89	56.46
VIT_18s0001g00280.t01	Wine grape	peroxisome, plastid	58.44	56.1
CDY01370	Canola	peroxisome, plastid	58.06	55.64
CDY33628	Canola	plastid	58.25	55.62
CDX96637	Canola	plastid	57.87	55.15
CDX96636	Canola	golgi, vacuole	39.47	54.31
HORVU4Hr1G081940.3	Barley	peroxisome	55.22	52.91
TraesCS5A01G498800.1	Wheat	peroxisome	55.41	52.9
TraesCS4D01G323500.1	Wheat	plastid	55.22	52.81
TraesCS4B01G326800.1	Wheat	peroxisome, plastid	55.22	52.72
CDY31474	Canola	peroxisome	57.87	52.59
Os03t0132000-01	Rice	plasma membrane	54.65	52.17
Zm00001d027519_P001	Maize	plasma membrane	54.27	51.91
EER95569	Sorghum	peroxisome	54.46	51.9
CDY53918	Canola	peroxisome	17.27	48.66
CDY45730	Canola	vacuole	42.31	48.58
CDY71478	Canola	vacuole	42.31	48.58
CDY33629	Canola	golgi, vacuole	38.71	48.23
CDY32418	Canola	peroxisome	15.94	45.9
CDY46375	Canola	peroxisome	42.88	41.7
CDY39155	Canola	peroxisome	42.69	41.51
CDY39153	Canola	peroxisome	41.18	40.26
CDY46376	Canola	peroxisome	40.99	40.07
CDX78914	Canola	peroxisome, plastid	40.42	37.11
CDY39816	Canola	peroxisome	37.95	37.04
CDY43921	Canola	peroxisome	37.38	35.75
CDX87831	Canola	peroxisome	37.19	35.57
CDY19568	Canola	peroxisome	36.81	35.14
CDY48875	Canola	mitochondrion, plastid, vacuole	29.6	35.14
CDY68920	Canola	peroxisome	36.62	34.9
CDY06431	Canola	peroxisome	36.24	34.54
CDY07442	Canola	peroxisome	36.43	34.53
CDY39293	Canola	peroxisome	36.24	34.29
CDX82208	Canola	peroxisome	36.62	33.74
CDY32416	Canola	peroxisome	36.43	33.45
CDY19570	Canola	peroxisome	34.72	32.74
CDX99401	Canola	peroxisome	36.43	28.74
CDY06435	Canola	vacuole	23.91	28.31
CDY71190	Canola	peroxisome	17.84	25.41
CDY65966	Canola	peroxisome	16.89	25.21
CDY03253	Canola	peroxisome	38.14	13.03
CDX78913	Canola	cytosol	0.19	0.56

Protein Annotations

MapMan:11.7.1.7	Gene3D:3.30.300.30	Gene3D:3.40.50.12780	GO:A0A078EB89	InterPro:AMP-bd_C	InterPro:AMP-binding_CS
InterPro:AMP-dep_Synth/Lig	EnsemblPlants:CDX96638	ProteinID:CDX96638	ProteinID:CDX96638.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	EnsemblPlantsGene:GSBRNA2T00102842001	PFAM:PF00501	PFAM:PF13193	ScanProsite:PS00455
PANTHER:PTHR24096	PANTHER:PTHR24096:SF186	SUPFAM:SSF56801	TMHMM:TMhelix	UniParc:UPI0004EE49F9	SEG:seg

Description

BnaA08g21810D

Coordinates

chrLK031895:+:351766..353690

Molecular Weight (calculated)

57498.8 Da

IEP (calculated)

8.114

GRAVY (calculated)

-0.009

Length

527 amino acids

Sequence
(BLAST)

001: MALDRKSGFC ESNSIFYSKR DPMVLPPPNQ HLDVTTFISS QPHRGKTAFV DAVTGRRLSF SELWLGVKRV AACLYSLGVR KGDVVIILSP NSVLYPVVSL
101: AVMSLGAVIT TANPISTSGE IGNQLGDSLP LPVVLMDDNN GVEAHAEGVK IVGSLEAMME SEQSESRAKQ RVNQDDTAAL LYSSGTTGKS KGVMITHRNL
201: IALVQTYRLR FGLEQRTVCT IPMCHVFSFG GFATSLIALG WTTMVLPKFE MSKLLSAVET HRPTHLTLVP PMVVAMVNGA KEINSNYDVS SLHTVVAGGA
301: PLSREVIEKF VKSYPNVKVL QGYGLTETTA IVATMFTKEE TERFGSSGLL SPNVEAKIVD PETGRLLGVD QTGELWLRSP TVMKGYYKNE EATAETIDSE
401: GWLKTGDLCY IDSEGFVFVV DRLKELIKCN GYQVAPAELE ALLLAHPEID DAAVIPIPDE KAGQYPMAYI VRKAGSNLSE SEIMGFVAKQ VSRYKKIRKV
501: VFLGSIPKNP SGKILRRELK KLTTSKL

Best Arabidopsis Sequence Match ( AT1G20480.1 )
(BLAST)

001: MAVKHGVDGD GSEIESRTLA VDRKSGFCES TSIFYSKREP MALPPNQFLD VTSFIASQPH RGKTVFVDAV TGRRLSFPEL WLGVERVAGC LYALGVRKGN
101: VVIILSPNSI LFPIVSLSVM SLGAIITTAN PINTSDEISK QIGDSRPVLA FTTCKLVSKL AAASNFNLPV VLMDDYHVPS QSYGDRVKLV GRLETMIETE
201: PSESRVKQRV NQDDTAALLY SSGTTGTSKG VMLSHRNLIA LVQAYRARFG LEQRTICTIP MCHIFGFGGF ATGLIALGWT IVVLPKFDMA KLLSAVETHR
301: SSYLSLVPPI VVAMVNGANE INSKYDLSSL HTVVAGGAPL SREVTEKFVE NYPKVKILQG YGLTESTAIA ASMFNKEETK RYGASGLLAP NVEGKIVDPD
401: TGRVLGVNQT GELWIRSPTV MKGYFKNKEA TASTIDSEGW LKTGDLCYID GDGFVFVVDR LKELIKCNGY QVAPAELEAL LLAHPEIADA AVIPIPDMKA
501: GQYPMAYIVR KVGSNLSESE IMGFVAKQVS PYKKIRKVTF LASIPKNPSG KILRRELTKL TTSKL

Arabidopsis Description

4CLL24-coumarate--CoA ligase-like 2 [Source:UniProtKB/Swiss-Prot;Acc:Q84P25]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.