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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome

Predictor Summary:
  • cytosol 1
  • peroxisome 2
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 2
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:peroxisome
Any Predictor:cytosol, peroxisome
BaCelLo:cytosol
MultiLoc:peroxisome
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra031266.1-P Field mustard peroxisome 98.37 98.37
AT3G21240.1 Thale cress peroxisome 87.32 86.69
CDX87831 Canola peroxisome 80.62 80.76
CDY43921 Canola peroxisome 80.25 80.4
CDY53918 Canola peroxisome 25.54 75.4
GSMUA_Achr4P12590_001 Banana peroxisome 63.04 71.17
PGSC0003DMT400074444 Potato peroxisome 69.02 70.17
Solyc06g068650.2.1 Tomato peroxisome 68.66 69.8
GSMUA_Achr4P05820_001 Banana peroxisome 65.94 69.73
PGSC0003DMT400036886 Potato peroxisome 68.84 69.72
Solyc03g117870.2.1 Tomato plastid 68.66 69.54
GSMUA_Achr9P22840_001 Banana peroxisome 48.01 69.37
KRH09616 Soybean mitochondrion, peroxisome 67.21 68.96
CDY32418 Canola peroxisome 22.83 68.85
KRH23700 Soybean peroxisome 67.21 67.82
GSMUA_AchrUn_... Banana peroxisome 63.59 67.76
GSMUA_Achr1P23450_001 Banana peroxisome 63.77 67.69
Solyc12g042460.1.1 Tomato peroxisome 66.49 66.97
GSMUA_Achr7P05070_001 Banana peroxisome 59.6 66.73
PGSC0003DMT400037485 Potato peroxisome 66.12 66.61
CDY48875 Canola mitochondrion, plastid, vacuole 51.63 64.19
EER90150 Sorghum peroxisome 64.67 64.09
CDY06435 Canola vacuole 51.63 64.04
TraesCS6B01G179900.2 Wheat peroxisome 63.22 63.69
TraesCS6A01G151700.1 Wheat peroxisome 62.86 63.55
TraesCS2B01G171200.1 Wheat peroxisome 62.14 63.52
TraesCS2D01G150400.1 Wheat peroxisome 62.14 63.52
TraesCS6D01G141700.1 Wheat peroxisome 63.04 63.39
TraesCS2A01G145800.1 Wheat peroxisome 62.14 63.28
CDY19570 Canola peroxisome 63.77 62.97
Os08t0448000-01 Rice peroxisome 61.41 62.89
TraesCS7A01G496200.1 Wheat peroxisome 63.41 62.84
Os02t0177600-01 Rice plasma membrane 62.86 62.64
HORVU6Hr1G030390.2 Barley peroxisome 62.68 62.57
TraesCS7D01G483400.1 Wheat peroxisome 63.41 62.5
Os06t0656500-01 Rice peroxisome 63.22 62.43
CDX82208 Canola peroxisome 64.49 62.24
CDY32416 Canola peroxisome 64.49 62.02
CDY68920 Canola peroxisome 61.96 61.84
EES04623 Sorghum peroxisome 62.14 61.8
CDY06431 Canola peroxisome 61.41 61.3
EES15085 Sorghum peroxisome 61.05 61.05
Zm00001d032103_P001 Maize peroxisome 60.87 60.54
CDY07442 Canola peroxisome 60.51 60.07
HORVU7Hr1G111130.3 Barley peroxisome, plastid 63.95 59.83
CDY39293 Canola peroxisome 60.33 59.78
Os08t0245200-01 Rice extracellular 59.96 58.69
Zm00001d015459_P003 Maize peroxisome 61.96 58.26
Zm00001d050224_P002 Maize peroxisome 58.33 57.5
EES13602 Sorghum peroxisome 59.24 57.27
Zm00001d046915_P001 Maize extracellular 64.31 55.56
CDY65966 Canola peroxisome 33.7 52.69
CDY71190 Canola peroxisome 34.78 51.89
CDY45731 Canola peroxisome 13.59 48.7
CDY39155 Canola peroxisome 41.3 42.07
CDY46375 Canola peroxisome 41.3 42.07
HORVU0Hr1G002720.3 Barley mitochondrion, plastid 39.67 40.11
CDY46376 Canola peroxisome 38.77 39.7
CDY39153 Canola peroxisome 38.59 39.52
CDY45730 Canola vacuole 32.25 38.78
CDY71478 Canola vacuole 31.7 38.13
CDY29527 Canola peroxisome 36.59 38.11
CDY39816 Canola peroxisome 37.14 37.96
CDY31472 Canola peroxisome 35.14 37.74
CDX96633 Canola plastid 36.96 36.89
CDX96638 Canola peroxisome 35.14 36.81
CDY33631 Canola plastid 36.78 36.71
CDX96636 Canola golgi, vacuole 25.18 36.29
CDY31883 Canola plastid 35.51 36.1
CDY01369 Canola plastid 35.51 36.1
CDY01370 Canola peroxisome, plastid 34.96 35.09
CDY33628 Canola plastid 34.78 34.78
CDX96637 Canola plastid 34.78 34.72
CDX78914 Canola peroxisome, plastid 35.69 34.32
CDY33627 Canola peroxisome 34.6 34.29
CDY31474 Canola peroxisome 34.6 32.93
CDY33629 Canola golgi, vacuole 24.82 32.39
CDX99401 Canola peroxisome 32.97 27.25
CDY03253 Canola peroxisome 37.14 13.29
CDX78913 Canola cytosol 0.0 0.0
Protein Annotations
Gene3D:3.30.300.30Gene3D:3.40.50.12780MapMan:7.8.1.1MapMan:9.2.1.3GO:A0A078G4H3UniProt:A0A078G4H3
InterPro:AMP-bd_CInterPro:AMP-binding_CSInterPro:AMP-dep_Synth/LigEnsemblPlants:CDY19568ProteinID:CDY19568ProteinID:CDY19568.1
GO:GO:0003674GO:GO:0003824GO:GO:0008150GO:GO:0008152EnsemblPlantsGene:GSBRNA2T00009220001PFAM:PF00501
PFAM:PF13193ScanProsite:PS00455PANTHER:PTHR24096PANTHER:PTHR24096:SF207SUPFAM:SSF56801UniParc:UPI0004EF0A8E
Description
BnaA05g19760DBnaA05g19760D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G4H3]
Coordinates
chrLK032098:+:54950..58034
Molecular Weight (calculated)
60081.6 Da
IEP (calculated)
5.933
GRAVY (calculated)
0.018
Length
552 amino acids
Sequence
(BLAST)
001: MSTREETVTD QKHSSADVIF RSKLPDIYIP NHLPLHDYIF QNISEYAAKP CLINGPTGDV HTYADVHATS RKLSAGLRKL GVGQHDVVMI LLPNSPEFVF
101: TFLAASFLGA VTTAANPFFT PAEISKQAKA SAAKLIVTQS RYVDKVRDLG LLIICTDSSS LIPEGCLSFS ELTHSGEEDH DPRVNSVEIS PEDVVALPYS
201: SGTTGLPKGV MLSHKGLVTS VAQQVDGENP NLYFNKEDVI LCVLPMFHIY ALNSIMLCSL RVGATILIMP KFEITLLLEQ IQRCKVTVAM VVPPIVLAMV
301: KSSETEKYDL SSVRMIKSGA APLGKELEDA ISAKFPNARL GQGYGMTEAG PVLAMSLGFA KEPFPVKSGA CGTVVRNAEL KIADPDTGSS LPRNSPGEIC
401: IRGHQIMKGY LNDPVATAAT IDKEGWLHTG DIGFVDDDDE LFIVDRLKEL IKYKGFQVAP AELESLLISH SDINDVAVVA MKEDDAGEVP VAFVVRSKES
501: NLSEDEIKQF VSKQVVFYKR INKVFFTDSI PKAPSGKILR KDLRARLANG LT
Best Arabidopsis Sequence Match ( AT3G21240.1 )
(BLAST)
001: MTTQDVIVND QNDQKQCSND VIFRSRLPDI YIPNHLPLHD YIFENISEFA AKPCLINGPT GEVYTYADVH VTSRKLAAGL HNLGVKQHDV VMILLPNSPE
101: VVLTFLAASF IGAITTSANP FFTPAEISKQ AKASAAKLIV TQSRYVDKIK NLQNDGVLIV TTDSDAIPEN CLRFSELTQS EEPRVDSIPE KISPEDVVAL
201: PFSSGTTGLP KGVMLTHKGL VTSVAQQVDG ENPNLYFNRD DVILCVLPMF HIYALNSIML CSLRVGATIL IMPKFEITLL LEQIQRCKVT VAMVVPPIVL
301: AIAKSPETEK YDLSSVRMVK SGAAPLGKEL EDAISAKFPN AKLGQGYGMT EAGPVLAMSL GFAKEPFPVK SGACGTVVRN AEMKILDPDT GDSLPRNKPG
401: EICIRGNQIM KGYLNDPLAT ASTIDKDGWL HTGDVGFIDD DDELFIVDRL KELIKYKGFQ VAPAELESLL IGHPEINDVA VVAMKEEDAG EVPVAFVVRS
501: KDSNISEDEI KQFVSKQVVF YKRINKVFFT DSIPKAPSGK ILRKDLRARL ANGLMN
Arabidopsis Description
4CL2Cinnamyl alcohol dehydrogenase [Source:UniProtKB/TrEMBL;Acc:B1GUZ3]
SUBAcon: [peroxisome]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.