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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome

Predictor Summary:
  • plastid 2
  • mitochondrion 2
  • peroxisome 2
Predictors GFP MS/MS Papers
Winner Takes All:peroxisome
Any Predictor:peroxisome, plastid
BaCelLo:plastid
iPSORT:mitochondrion
MultiLoc:peroxisome
PProwler:mitochondrion
WoLF PSORT:plastid
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX96638 Canola peroxisome 85.46 90.32
CDY31472 Canola peroxisome 75.94 82.3
CDY29527 Canola peroxisome 76.3 80.19
AT1G20480.1 Thale cress peroxisome 77.56 76.46
CDY33631 Canola plastid 59.25 59.67
CDX96633 Canola plastid 58.89 59.31
VIT_18s0001g00290.t01 Wine grape peroxisome 57.63 58.47
KRH17509 Soybean peroxisome, plastid 57.45 58.29
CDY31883 Canola plastid 55.66 57.09
CDY01369 Canola plastid 55.66 57.09
Solyc12g094520.1.1 Tomato plastid 56.37 56.99
PGSC0003DMT400075394 Potato peroxisome, plastid 56.37 56.99
CDY45731 Canola peroxisome 15.62 56.49
VIT_18s0001g00280.t01 Wine grape peroxisome, plastid 55.3 56.1
CDY33628 Canola plastid 55.12 55.62
GSMUA_Achr8P13230_001 Banana peroxisome 49.91 55.27
CDY01370 Canola peroxisome, plastid 54.22 54.91
CDX96637 Canola plastid 54.22 54.61
CDX96636 Canola golgi, vacuole 36.62 53.26
HORVU4Hr1G081940.3 Barley peroxisome 52.06 52.73
TraesCS5A01G498800.1 Wheat peroxisome 52.24 52.72
TraesCS4D01G323500.1 Wheat plastid 52.06 52.63
TraesCS4B01G326800.1 Wheat peroxisome, plastid 52.06 52.54
Zm00001d027519_P001 Maize plasma membrane 51.53 52.09
Os03t0132000-01 Rice plasma membrane 51.53 51.99
EER95569 Sorghum peroxisome 51.53 51.9
CDY31474 Canola peroxisome 54.04 51.9
CDY33629 Canola golgi, vacuole 36.62 48.23
CDY71478 Canola vacuole 39.14 47.49
CDY45730 Canola vacuole 39.14 47.49
CDY53918 Canola peroxisome 14.9 44.38
CDY32418 Canola peroxisome 13.82 42.08
CDY46375 Canola peroxisome 40.04 41.14
CDY39155 Canola peroxisome 39.68 40.77
CDY39153 Canola peroxisome 37.88 39.15
CDY46376 Canola peroxisome 37.52 38.78
CDX78914 Canola peroxisome, plastid 38.24 37.11
CDY39816 Canola peroxisome 34.83 35.93
CDY43921 Canola peroxisome 34.65 35.03
CDX87831 Canola peroxisome 34.47 34.85
CDY19568 Canola peroxisome 34.29 34.6
CDY68920 Canola peroxisome 33.93 34.18
CDY06431 Canola peroxisome 33.57 33.82
CDY07442 Canola peroxisome 33.57 33.63
CDY39293 Canola peroxisome 33.39 33.39
CDX82208 Canola peroxisome 33.93 33.04
CDY48875 Canola mitochondrion, plastid, vacuole 26.21 32.88
CDY32416 Canola peroxisome 33.57 32.58
CDY19570 Canola peroxisome 32.32 32.2
CDX99401 Canola peroxisome 35.01 29.19
CDY06435 Canola vacuole 22.08 27.64
CDY71190 Canola peroxisome 17.77 26.76
CDY65966 Canola peroxisome 15.62 24.65
CDY03253 Canola peroxisome 35.01 12.64
CDX78913 Canola cytosol 0.36 1.12
Protein Annotations
MapMan:11.7.1.7Gene3D:3.30.300.30Gene3D:3.40.50.12780GO:A0A078H821UniProt:A0A078H821InterPro:AMP-bd_C
InterPro:AMP-binding_CSInterPro:AMP-dep_Synth/LigEnsemblPlants:CDY33627ProteinID:CDY33627ProteinID:CDY33627.1GO:GO:0003674
GO:GO:0003824GO:GO:0005575GO:GO:0008150GO:GO:0008152GO:GO:0016020GO:GO:0016021
EnsemblPlantsGene:GSBRNA2T00054969001PFAM:PF00501PFAM:PF13193ScanProsite:PS00455PANTHER:PTHR24096PANTHER:PTHR24096:SF186
SUPFAM:SSF56801TMHMM:TMhelixUniParc:UPI0004EEE6F4SEG:seg::
Description
BnaC08g19270DBnaC08g19270D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H821]
Coordinates
chrLK032319:-:48752..50924
Molecular Weight (calculated)
60821.3 Da
IEP (calculated)
9.089
GRAVY (calculated)
0.064
Length
557 amino acids
Sequence
(BLAST)
001: MALDRKSGFC QSNSIFYSKR DPMILPPPNQ HLDVTTFISS QPHRGKTAFV DAVTGRRLGF SELWLGVKRV AACLYSLGVR KGDVVIILSP NSILYPVVSL
101: SVMSLGAVIT TANPISTPGE IAKQMEDSLP VLAFTTCQLV SKLAAAASNG NLPKGVKIVG SLELMMENER SESRAKHRVN QDDTAALLYS SGTTGKSKGV
201: MITHRNLIAL VQTYRLRFGL EQRTVCTIPM CHVFSFGGFA TSLIALGWTT MVLPKFEMSK LLSAMEAHRP THLTLVPPMV VAMVNGAKEI NSKYDVSSLH
301: TVVAGGAPLS REVIEKFVKN YPNVKVLQGY GLTETTAIVA TMFTKEETER YGSSGLLSPN VEAKIVDPET GRLLGVDQTG ELWLRSPTVM KGYYKNEEAT
401: AETIDSEGWL KTGDLCYIDC EGFVFVVDRL KELIKCNGYQ VAPAELEALL LAHPEIDDAA VIPIPDEKAG QYPMAYIVRK AGSNLSESEI MGFVAKQVSR
501: YKKIRKVVFL AVSTIIISKN DCQTLTTLKP KIARLSHPGM TQSSKSLAVS ITVIFIR
Best Arabidopsis Sequence Match ( AT1G20480.1 )
(BLAST)
001: MAVKHGVDGD GSEIESRTLA VDRKSGFCES TSIFYSKREP MALPPNQFLD VTSFIASQPH RGKTVFVDAV TGRRLSFPEL WLGVERVAGC LYALGVRKGN
101: VVIILSPNSI LFPIVSLSVM SLGAIITTAN PINTSDEISK QIGDSRPVLA FTTCKLVSKL AAASNFNLPV VLMDDYHVPS QSYGDRVKLV GRLETMIETE
201: PSESRVKQRV NQDDTAALLY SSGTTGTSKG VMLSHRNLIA LVQAYRARFG LEQRTICTIP MCHIFGFGGF ATGLIALGWT IVVLPKFDMA KLLSAVETHR
301: SSYLSLVPPI VVAMVNGANE INSKYDLSSL HTVVAGGAPL SREVTEKFVE NYPKVKILQG YGLTESTAIA ASMFNKEETK RYGASGLLAP NVEGKIVDPD
401: TGRVLGVNQT GELWIRSPTV MKGYFKNKEA TASTIDSEGW LKTGDLCYID GDGFVFVVDR LKELIKCNGY QVAPAELEAL LLAHPEIADA AVIPIPDMKA
501: GQYPMAYIVR KVGSNLSESE IMGFVAKQVS PYKKIRKVTF LASIPKNPSG KILRRELTKL TTSKL
Arabidopsis Description
4CLL24-coumarate--CoA ligase-like 2 [Source:UniProtKB/Swiss-Prot;Acc:Q84P25]
SUBAcon: [peroxisome]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.