CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid

Predictor Summary:

cytosol 2
plastid 2
peroxisome 4
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT1G20510.1	Thale cress	plastid	74.13	74.54
CDY33631	Canola	plastid	73.95	73.42
PGSC0003DMT400075394	Potato	peroxisome, plastid	73.41	73.14
CDX96633	Canola	plastid	73.59	73.06
VIT_18s0001g00290.t01	Wine grape	peroxisome	73.04	73.04
Bra016463.1-P	Field mustard	plastid	73.22	72.69
Solyc12g094520.1.1	Tomato	plastid	72.86	72.6
GSMUA_Achr8P13230_001	Banana	peroxisome	64.12	69.98
VIT_18s0001g00280.t01	Wine grape	peroxisome, plastid	68.31	68.31
TraesCS5A01G498800.1	Wheat	peroxisome	65.39	65.04
HORVU4Hr1G081940.3	Barley	peroxisome	65.03	64.91
AT1G20500.1	Thale cress	plastid	64.85	64.73
TraesCS4D01G323500.1	Wheat	plastid	64.66	64.43
TraesCS4B01G326800.1	Wheat	peroxisome, plastid	64.66	64.31
CDY31883	Canola	plastid	63.57	64.27
Bra012233.1-P	Field mustard	plastid	63.21	64.02
EER95569	Sorghum	peroxisome	64.48	64.01
CDY01369	Canola	plastid	63.21	63.9
Zm00001d027519_P001	Maize	plasma membrane	64.12	63.88
Os03t0132000-01	Rice	plasma membrane	64.12	63.77
Bra012232.1-P	Field mustard	peroxisome, plastid	63.02	63.02
CDY01370	Canola	peroxisome, plastid	63.02	62.91
CDY31472	Canola	peroxisome	58.47	62.45
CDY29527	Canola	peroxisome	59.93	62.08
CDX96638	Canola	peroxisome	59.38	61.86
CDY33628	Canola	plastid	62.11	61.78
Bra016466.1-P	Field mustard	peroxisome	61.02	61.13
Bra016464.1-P	Field mustard	plastid	62.3	60.96
CDX96637	Canola	plastid	61.38	60.94
AT5G38120.1	Thale cress	plastid	61.02	60.91
Bra025822.1-P	Field mustard	peroxisome	60.11	60.77
AT1G20480.1	Thale cress	peroxisome	62.48	60.71
CDX96636	Canola	golgi, vacuole	42.26	60.57
Bra016465.1-P	Field mustard	plastid	52.46	58.66
CDY33627	Canola	peroxisome	58.29	57.45
AT1G20490.2	Thale cress	peroxisome	46.27	56.82
CDY31474	Canola	peroxisome	59.56	56.38
CDY33629	Canola	golgi, vacuole	40.62	52.72
KRH63132	Soybean	vacuole	26.96	51.93
KRG92118	Soybean	peroxisome	13.84	47.5
KRH25085	Soybean	peroxisome	26.05	46.89
KRG94318	Soybean	peroxisome, plastid	45.54	46.21
KRH34672	Soybean	peroxisome	46.08	44.39
KRH57646	Soybean	peroxisome, plastid	44.63	44.38
KRH63739	Soybean	peroxisome, plastid	46.81	44.31
KRG92119	Soybean	peroxisome	45.9	44.29
KRH34673	Soybean	peroxisome	45.17	43.51
KRH54211	Soybean	peroxisome	46.99	43.22
KRH74284	Soybean	peroxisome	42.99	42.68
KRH22842	Soybean	peroxisome, plastid	41.35	42.04
KRH30593	Soybean	peroxisome	41.35	40.68
KRH09616	Soybean	mitochondrion, peroxisome	37.89	38.66
KRH23700	Soybean	peroxisome	37.7	37.84
KRH39635	Soybean	cytosol, golgi, peroxisome	34.06	37.55
KRH77759	Soybean	peroxisome	37.7	37.3
KRH29003	Soybean	plastid	38.07	37.06
KRH02885	Soybean	peroxisome	36.07	36.94
KRH02884	Soybean	peroxisome	36.43	36.56
KRH27719	Soybean	peroxisome	35.15	35.81
KRH02886	Soybean	peroxisome, plastid	36.25	35.28
KRG98485	Soybean	peroxisome	34.24	34.0
KRH46374	Soybean	peroxisome	33.7	33.45
KRH19011	Soybean	peroxisome	32.97	32.21
KRG94321	Soybean	cytosol, golgi, peroxisome	16.76	29.21
KRH57649	Soybean	plastid	14.39	28.21

Protein Annotations

EntrezGene:100811344	MapMan:11.7.1.7	Gene3D:3.30.300.30	Gene3D:3.40.50.12780	EMBL:ACUP02009097	InterPro:AMP-bd_C
InterPro:AMP-binding_CS	InterPro:AMP-dep_Synth/Lig	EnsemblPlantsGene:GLYMA_14G223200	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005777	GO:GO:0006950	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009611	GO:GO:0009695	GO:GO:0009987	GO:GO:0016020
GO:GO:0016021	UniProt:I1MBZ0	EnsemblPlants:KRH17509	ProteinID:KRH17509	ProteinID:KRH17509.1	PFAM:PF00501
PFAM:PF13193	ScanProsite:PS00455	PANTHER:PTHR24096	PANTHER:PTHR24096:SF186	SUPFAM:SSF56801	TMHMM:TMhelix
UniParc:UPI000233B86B	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr14:-:48847835..48851358

Molecular Weight (calculated)

59553.2 Da

IEP (calculated)

8.525

GRAVY (calculated)

0.042

Length

549 amino acids

Sequence
(BLAST)

001: MMEEIDPRSG FCSSNSIFYS KRKPLPLPPN NALDVTTFIS SRAHRATTAF VDAATARRLT YTQLWRSVEG VAASLSVDMG IRKGNVVLIL SPNSIHFPVV
101: CLAVMSLGAI ITTTNPLNTT REIAKQIADS KPLLAFTISD LLPKITAAAP SLPIVLMDND GANNNNNNNN IVATLDEMAK KEPVAQRVKE RVEQDDTATL
201: LYSSGTTGPS KGVVSSHRNL IAMVQIVLGR FHMEENETFI CTVPMFHIYG LVAFATGLLA SGSTIVVLSK FEMHDMLSSI ERFRATYLPL VPPILVAMLN
301: NAAAIKGKYD ITSLHSVLSG GAPLSKEVIE GFVAKYPNVT ILQGYGLTES TGVGASTDSL EESRRYGTAG LLSPATQAMI VDPESGQSLP VNRTGELWLR
401: GPTIMKGYFS NEEATTSTLD SKGWLRTGDI CYIDNDGFIF IVDRLKELIK YKGYQVPPAE LEALLLTHPA ILDAAVIPYP DKEAGQHPMA YVVRKAGSSL
501: SETQVMDFVA GQVAPYKRIR KVAFISSIPK NPSGKILRKD LIKLATSKL

Best Arabidopsis Sequence Match ( AT1G20510.1 )
(BLAST)

001: MASVNSRSGF CNSNSTFYSK RTPIPLPPNP SLDVTTFISS QAHRGRIAFI DASTGQNLTF TELWRAVESV ADCLSEIGIR KGHVVLLLSP NSILFPVVCL
101: SVMSLGAIIT TTNPLNTSNE IAKQIKDSNP VLAFTTSQLL PKISAAAKKL PIVLMDEERV DSVGDVRRLV EMMKKEPSGN RVKERVDQDD TATLLYSSGT
201: TGMSKGVISS HRNLIAMVQT IVNRFGSDDG EQRFICTVPM FHIYGLAAFA TGLLAYGSTI IVLSKFEMHE MMSAIGKYQA TSLPLVPPIL VAMVNGADQI
301: KAKYDLSSMH TVLCGGAPLS KEVTEGFAEK YPTVKILQGY GLTESTGIGA STDTVEESRR YGTAGKLSAS MEGRIVDPVT GQILGPKQTG ELWLKGPSIM
401: KGYFSNEEAT SSTLDSEGWL RTGDLCYIDE DGFIFVVDRL KELIKYKGYQ VAPAELEALL LTHPEITDAA VIPFPDKEVG QFPMAYVVRK TGSSLSEKTI
501: MEFVAKQVAP YKRIRKVAFV SSIPKNPSGK ILRKDLIKIA TSNSKL

Arabidopsis Description

4CLL54-coumarate--CoA ligase-like 5 [Source:UniProtKB/Swiss-Prot;Acc:Q84P21]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.