CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

cytosol 1
vacuole 1
peroxisome 3
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH27719	Soybean	peroxisome	83.6	86.09
VIT_16s0039g02040.t01	Wine grape	peroxisome	78.02	79.01
PGSC0003DMT400008182	Potato	peroxisome	73.69	71.88
Solyc03g097030.2.1	Tomato	peroxisome	73.69	71.75
Bra004109.1-P	Field mustard	peroxisome	67.93	67.81
CDY07442	Canola	peroxisome	67.93	67.81
KRH29003	Soybean	plastid	68.83	67.73
AT1G65060.1	Thale cress	peroxisome	68.29	67.56
GSMUA_Achr11P...	Banana	peroxisome, plastid	64.86	67.54
CDY39293	Canola	peroxisome	67.57	67.33
GSMUA_Achr2P18040_001	Banana	peroxisome, plastid	63.42	65.43
EES05680	Sorghum	peroxisome	66.67	65.37
TraesCS6D01G248000.1	Wheat	peroxisome, plasma membrane	65.95	64.44
TraesCS6B01G294100.1	Wheat	peroxisome	66.31	64.22
TraesCS6A01G266700.1	Wheat	peroxisome	66.13	64.05
HORVU0Hr1G018190.2	Barley	peroxisome	65.41	63.8
Os02t0697400-01	Rice	plasma membrane	65.41	63.8
KRH02885	Soybean	peroxisome	61.26	63.43
KRH02884	Soybean	peroxisome	61.8	62.71
KRH09616	Soybean	mitochondrion, peroxisome	58.56	60.41
KRH23700	Soybean	peroxisome	59.28	60.15
KRH02886	Soybean	peroxisome, plastid	56.76	55.85
Zm00001d051529_P001	Maize	peroxisome, plasma membrane	62.34	54.57
KRH19011	Soybean	peroxisome	52.79	52.14
KRH25085	Soybean	peroxisome	25.41	46.23
KRH63132	Soybean	vacuole	21.98	42.81
KRH22842	Soybean	peroxisome, plastid	41.08	42.22
KRH30593	Soybean	peroxisome	40.72	40.5
KRG92118	Soybean	peroxisome	11.53	40.0
KRH17509	Soybean	peroxisome, plastid	37.3	37.7
KRG98485	Soybean	peroxisome	36.04	36.17
KRG92119	Soybean	peroxisome	36.94	36.03
KRH46374	Soybean	peroxisome	35.68	35.8
KRH34672	Soybean	peroxisome	36.4	35.44
KRH63739	Soybean	peroxisome, plastid	36.58	35.0
KRH74284	Soybean	peroxisome	34.77	34.9
KRH54211	Soybean	peroxisome	36.58	34.0
KRH34673	Soybean	peroxisome	34.77	33.86
KRH57646	Soybean	peroxisome, plastid	32.61	32.79
KRG94318	Soybean	peroxisome, plastid	31.89	32.72
KRH39635	Soybean	cytosol, golgi, peroxisome	27.57	30.72
KRG94321	Soybean	cytosol, golgi, peroxisome	11.53	20.32
KRH57649	Soybean	plastid	10.09	20.0

Protein Annotations

Gene3D:3.30.300.30	Gene3D:3.40.50.12780	MapMan:7.8.1.1	MapMan:9.2.1.3	EMBL:ACUP02000684	InterPro:AMP-bd_C
InterPro:AMP-binding_CS	InterPro:AMP-dep_Synth/Lig	EnsemblPlantsGene:GLYMA_01G232400	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0008150	GO:GO:0008152	GO:GO:0009698
GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016207	GO:GO:0016874	GO:GO:0019748
UniProt:I1JAM0	EnsemblPlants:KRH77759	ProteinID:KRH77759	ProteinID:KRH77759.1	PFAM:PF00501	PFAM:PF13193
ScanProsite:PS00455	PANTHER:PTHR24096	PANTHER:PTHR24096:SF169	SUPFAM:SSF56801	UniParc:UPI000295E76C	SEG:seg

Description

hypothetical protein

Coordinates

chr1:-:55890700..55894659

Molecular Weight (calculated)

60100.6 Da

IEP (calculated)

5.865

GRAVY (calculated)

0.062

Length

555 amino acids

Sequence
(BLAST)

001: MITLAPSLDT PKTDQNQVSD PQTSHVFKSK LPDIPISNHL PLHSYCFQNL SQFAHRPCLI VGPASKTFTY ADTHLISSKI AAGLSNLGIL KGDVVMILLQ
101: NSADFVFSFL AISMIGAVAT TANPFYTAPE IFKQFTVSKA KLIITQAMYV DKLRNHDGAK LGEDFKVVTV DDPPENCLHF SVLSEANESD VPEVEIHPDD
201: AVAMPFSSGT TGLPKGVILT HKSLTTSVAQ QVDGENPNLY LTTEDVLLCV LPALSHILAQ QAGSAVLLMQ KFEIGTLLEL IQRHRVSVAM VVPPLVLALA
301: KNPMVADFDL SSIRLVLSGA APLGKELEEA LRNRMPQAVL GQGYGMTEAG PVLSMCLGFA KQPFQTKSGS CGTVVRNAEL KVVDPETGRS LGYNQPGEIC
401: IRGQQIMKGY LNDEAATAST IDSEGWLHTG DVGYVDDDDE IFIVDRVKEL IKYKGFQVPP AELEGLLVSH PSIADAAVVP QKDVAAGEVP VAFVVRSNGF
501: DLTEEAVKEF IAKQVVFYKR LHKVYFVHAI PKSPSGKILR KDLRAKLETA ATQTP

Best Arabidopsis Sequence Match ( AT1G65060.1 )
(BLAST)

001: MITAALHEPQ IHKPTDTSVV SDDVLPHSPP TPRIFRSKLP DIDIPNHLPL HTYCFEKLSS VSDKPCLIVG STGKSYTYGE THLICRRVAS GLYKLGIRKG
101: DVIMILLQNS AEFVFSFMGA SMIGAVSTTA NPFYTSQELY KQLKSSGAKL IITHSQYVDK LKNLGENLTL ITTDEPTPEN CLPFSTLITD DETNPFQETV
201: DIGGDDAAAL PFSSGTTGLP KGVVLTHKSL ITSVAQQVDG DNPNLYLKSN DVILCVLPLF HIYSLNSVLL NSLRSGATVL LMHKFEIGAL LDLIQRHRVT
301: IAALVPPLVI ALAKNPTVNS YDLSSVRFVL SGAAPLGKEL QDSLRRRLPQ AILGQGYGMT EAGPVLSMSL GFAKEPIPTK SGSCGTVVRN AELKVVHLET
401: RLSLGYNQPG EICIRGQQIM KEYLNDPEAT SATIDEEGWL HTGDIGYVDE DDEIFIVDRL KEVIKFKGFQ VPPAELESLL INHHSIADAA VVPQNDEVAG
501: EVPVAFVVRS NGNDITEEDV KEYVAKQVVF YKRLHKVFFV ASIPKSPSGK ILRKDLKAKL C

Arabidopsis Description

4CL34-coumarate--CoA ligase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9S777]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.