CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

cytosol 1
plastid 4
vacuole 1
peroxisome 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH77759	Soybean	peroxisome	67.73	68.83
VIT_16s0039g02040.t01	Wine grape	peroxisome	65.78	67.7
GSMUA_Achr11P...	Banana	peroxisome, plastid	61.88	65.48
GSMUA_Achr2P18040_001	Banana	peroxisome, plastid	62.06	65.06
AT1G65060.1	Thale cress	peroxisome	64.54	64.88
KRH27719	Soybean	peroxisome	61.52	64.38
TraesCS6D01G248000.1	Wheat	peroxisome, plasma membrane	64.18	63.73
PGSC0003DMT400008182	Potato	peroxisome	64.18	63.62
TraesCS6B01G294100.1	Wheat	peroxisome	64.54	63.53
CDY39293	Canola	peroxisome	62.59	63.38
CDY07442	Canola	peroxisome	62.41	63.31
Bra004109.1-P	Field mustard	peroxisome	62.41	63.31
HORVU0Hr1G018190.2	Barley	peroxisome	63.83	63.27
EES05680	Sorghum	peroxisome	63.48	63.25
TraesCS6A01G266700.1	Wheat	peroxisome	64.01	63.0
Solyc03g097030.2.1	Tomato	peroxisome	63.65	62.98
Os02t0697400-01	Rice	plasma membrane	62.77	62.21
KRH09616	Soybean	mitochondrion, peroxisome	56.21	58.92
KRH02885	Soybean	peroxisome	55.14	58.02
KRH02884	Soybean	peroxisome	56.03	57.77
KRH23700	Soybean	peroxisome	55.85	57.59
Zm00001d051529_P001	Maize	peroxisome, plasma membrane	60.99	54.26
KRH02886	Soybean	peroxisome, plastid	51.06	51.06
KRH19011	Soybean	peroxisome	48.05	48.22
KRH25085	Soybean	peroxisome	24.82	45.9
KRH22842	Soybean	peroxisome, plastid	39.89	41.67
KRH30593	Soybean	peroxisome	39.18	39.61
KRG92118	Soybean	peroxisome	11.17	39.38
KRH63132	Soybean	vacuole	19.5	38.6
KRH17509	Soybean	peroxisome, plastid	37.06	38.07
KRG98485	Soybean	peroxisome	34.75	35.44
KRH63739	Soybean	peroxisome, plastid	36.35	35.34
KRG92119	Soybean	peroxisome	35.28	34.97
KRG94318	Soybean	peroxisome, plastid	33.51	34.94
KRH74284	Soybean	peroxisome	34.22	34.9
KRH46374	Soybean	peroxisome	34.04	34.72
KRH34672	Soybean	peroxisome	34.75	34.39
KRH54211	Soybean	peroxisome	36.17	34.17
KRH57646	Soybean	peroxisome, plastid	33.33	34.06
KRH34673	Soybean	peroxisome	33.87	33.51
KRH39635	Soybean	cytosol, golgi, peroxisome	27.84	31.53
KRH57649	Soybean	plastid	11.52	23.21
KRG94321	Soybean	cytosol, golgi, peroxisome	12.23	21.9

Protein Annotations

EntrezGene:100790396	Gene3D:3.30.300.30	Gene3D:3.40.50.12780	MapMan:7.8.1.1	MapMan:9.2.1.3	EMBL:ACUP02006776
InterPro:AMP-bd_C	InterPro:AMP-binding_CS	InterPro:AMP-dep_Synth/Lig	EnsemblPlantsGene:GLYMA_11G091600	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	UniProt:K7LNS5	EnsemblPlants:KRH29003	ProteinID:KRH29003	ProteinID:KRH29003.1
PFAM:PF00501	PFAM:PF13193	ScanProsite:PS00455	PANTHER:PTHR24096	PANTHER:PTHR24096:SF169	SUPFAM:SSF56801
UniParc:UPI000233D705	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr11:+:6929293..6933159

Molecular Weight (calculated)

61237.3 Da

IEP (calculated)

5.980

GRAVY (calculated)

0.082

Length

564 amino acids

Sequence
(BLAST)

001: MSEAAATSFE TQHSSTESCV PKTTTTTSSD VSSSPQTTHI FKSKLPDIPL PNNLPLHKYC FLKLPEIADR PCLIAGSRKY TYGETHVTSR RVAAGMSKLG
101: IQKGDVIMIL LPNSPEFVFF FMASSMLGAV ATTANPFYTA AEITKQLAAS KAKLVVTLSA HVHKLDQQQG LKVVTVDEPA ADENCMSFRE GEESEVAEVE
201: ISAEDAVALP FSSGTTGLAK GVVLTHKSLV TGVAQNMEGE NPNVYLKEED VVLCVLPLFH IFSMHSVMMC ALRAGSAILL IEKFEIRALL EEIERHRVTV
301: AMVVPPLVVA LAKNPAVEEY DLSSIRLVMS GAAPLGHQLE EVLRNRLPNA ILGQGYGMTE AGPVLAMCLG FAKYPFPTKT GSCGTVVRNA ELKVIHPLTA
401: LSLPPNHPGE ICIRGQQIMK GYLNDEKATA ATIDVDGWLH TGDIGYVDDD DEIFLIDRAK ELIKFKGFQV PPAELEDLLM SHPSIADAAV VPQNDDAAGE
501: VPVAFVVGFD LTEEAVKDFI AKQVVFYKRL HKVYFVPAIP KSPTGKILRK ELRAKLASII IQRT

Best Arabidopsis Sequence Match ( AT1G65060.1 )
(BLAST)

001: MITAALHEPQ IHKPTDTSVV SDDVLPHSPP TPRIFRSKLP DIDIPNHLPL HTYCFEKLSS VSDKPCLIVG STGKSYTYGE THLICRRVAS GLYKLGIRKG
101: DVIMILLQNS AEFVFSFMGA SMIGAVSTTA NPFYTSQELY KQLKSSGAKL IITHSQYVDK LKNLGENLTL ITTDEPTPEN CLPFSTLITD DETNPFQETV
201: DIGGDDAAAL PFSSGTTGLP KGVVLTHKSL ITSVAQQVDG DNPNLYLKSN DVILCVLPLF HIYSLNSVLL NSLRSGATVL LMHKFEIGAL LDLIQRHRVT
301: IAALVPPLVI ALAKNPTVNS YDLSSVRFVL SGAAPLGKEL QDSLRRRLPQ AILGQGYGMT EAGPVLSMSL GFAKEPIPTK SGSCGTVVRN AELKVVHLET
401: RLSLGYNQPG EICIRGQQIM KEYLNDPEAT SATIDEEGWL HTGDIGYVDE DDEIFIVDRL KEVIKFKGFQ VPPAELESLL INHHSIADAA VVPQNDEVAG
501: EVPVAFVVRS NGNDITEEDV KEYVAKQVVF YKRLHKVFFV ASIPKSPSGK ILRKDLKAKL C

Arabidopsis Description

4CL34-coumarate--CoA ligase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9S777]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.