Factsheet for Bra004109.1-P

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

cytosol 2
vacuole 1
peroxisome 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY07442	Canola	peroxisome	100.0	100.0
AT1G65060.1	Thale cress	peroxisome	89.39	88.59
VIT_16s0039g02040.t01	Wine grape	peroxisome	69.24	70.26
KRH77759	Soybean	peroxisome	67.81	67.93
GSMUA_Achr11P...	Banana	peroxisome, plastid	63.31	66.04
EES05680	Sorghum	peroxisome	66.73	65.55
Os02t0697400-01	Rice	plasma membrane	66.55	65.03
TraesCS6D01G248000.1	Wheat	peroxisome, plasma membrane	66.19	64.79
TraesCS6B01G294100.1	Wheat	peroxisome	66.55	64.57
GSMUA_Achr2P18040_001	Banana	peroxisome, plastid	62.23	64.31
HORVU0Hr1G018190.2	Barley	peroxisome	65.65	64.15
KRH27719	Soybean	peroxisome	62.05	64.01
PGSC0003DMT400008182	Potato	peroxisome	65.47	63.97
TraesCS6A01G266700.1	Wheat	peroxisome	65.83	63.87
Solyc03g097030.2.1	Tomato	peroxisome	65.11	63.51
KRH29003	Soybean	plastid	63.31	62.41
Bra030429.1-P	Field mustard	peroxisome	60.25	60.69
Bra031266.1-P	Field mustard	peroxisome	59.89	60.33
Zm00001d051529_P001	Maize	peroxisome, plasma membrane	63.31	55.52
Bra031263.1-P	Field mustard	peroxisome	53.42	53.71
Bra001819.1-P	Field mustard	peroxisome	54.68	52.96
Bra031265.1-P	Field mustard	peroxisome	53.06	52.77
Bra001820.1-P	Field mustard	peroxisome	53.42	50.77
Bra029561.1-P	Field mustard	peroxisome	39.75	40.77
Bra029560.1-P	Field mustard	peroxisome	35.43	36.89
Bra016463.1-P	Field mustard	plastid	36.33	36.53
Bra016466.1-P	Field mustard	peroxisome	35.25	35.77
Bra025822.1-P	Field mustard	peroxisome	34.53	35.36
Bra013369.1-P	Field mustard	peroxisome, plastid	35.79	34.73
Bra029229.1-P	Field mustard	peroxisome	34.53	34.35
Bra012233.1-P	Field mustard	plastid	32.91	33.76
Bra016464.1-P	Field mustard	plastid	33.99	33.69
Bra012232.1-P	Field mustard	peroxisome, plastid	32.91	33.33
Bra016465.1-P	Field mustard	plastid	27.52	31.16
Bra036646.1-P	Field mustard	peroxisome	35.79	13.46

Protein Annotations

Gene3D:3.30.300.30	Gene3D:3.40.50.12780	MapMan:7.8.1.1	MapMan:9.2.1.3	InterPro:AMP-bd_C	InterPro:AMP-binding_CS
InterPro:AMP-dep_Synth/Lig	EnsemblPlantsGene:Bra004109	EnsemblPlants:Bra004109.1	EnsemblPlants:Bra004109.1-P	GO:GO:0003674	GO:GO:0003824
GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009653	GO:GO:0009987	GO:GO:0010584
GO:GO:0016043	GO:GO:0016207	UniProt:M4CIS5	PFAM:PF00501	PFAM:PF13193	ScanProsite:PS00455
PANTHER:PTHR24096	PANTHER:PTHR24096:SF169	SUPFAM:SSF56801	UniParc:UPI0002541403	SEG:seg	:

Description

AT1G65060 (E=1e-253) 4CL3 | 4CL3; 4-coumarate-CoA ligase

Coordinates

chrA07:+:16893174..16898002

Molecular Weight (calculated)

60444.9 Da

IEP (calculated)

5.946

GRAVY (calculated)

-0.036

Length

556 amino acids

Sequence
(BLAST)

001: MITATLQEPQ IHQPVDTTTP PTDAPPTPPR IFRSKLPDID IPNHLPLHTY CFQKLSSVSD KPCLIVGSTG KSYTYDETHL ICRRVAAGLH KMGIRKGDVI
101: MILLQNSAEF VFSFMGASMI GAVSTTANPF YTSQEIHKQV KSSGAKLIIT HSHYVDKLRN LDGETRIGED LTVITTEDNP PPENCLPFST LLTDDETTSL
201: DVVDVGGDDA AALPFSSGTT GLPKGVVLTH KSLITSVAQQ VDGDNPNLYL KPNDVVLCVL PLFHIYSLNS VLLNSIRSGA TVLLMHKFEI GALLDLIQRH
301: KVTVAALVPP LVIALAKNPT VNSYDLSSVR LVLSGAAPLG KDLEDSLGRR LPQAVLGQGY GMTEAGPVLS MSLGFAKEPT PSKSGSCGTV VRNAELKVVH
401: LETRLSLGYN QPGEICIRGQ QIMKEYLNDP EATSATIDEE GWLHTGDIGY VDEDDEIFIV DRLKEVPPAE LEALLINHHS IADAAVVPQR DEVAGEVPVA
501: FVVRSNGNVI TEEDIKEYIA KQVVFYKRLH KVFFVPSIPK SPSGKILRKD LKAKLC

Best Arabidopsis Sequence Match ( AT1G65060.1 )
(BLAST)

001: MITAALHEPQ IHKPTDTSVV SDDVLPHSPP TPRIFRSKLP DIDIPNHLPL HTYCFEKLSS VSDKPCLIVG STGKSYTYGE THLICRRVAS GLYKLGIRKG
101: DVIMILLQNS AEFVFSFMGA SMIGAVSTTA NPFYTSQELY KQLKSSGAKL IITHSQYVDK LKNLGENLTL ITTDEPTPEN CLPFSTLITD DETNPFQETV
201: DIGGDDAAAL PFSSGTTGLP KGVVLTHKSL ITSVAQQVDG DNPNLYLKSN DVILCVLPLF HIYSLNSVLL NSLRSGATVL LMHKFEIGAL LDLIQRHRVT
301: IAALVPPLVI ALAKNPTVNS YDLSSVRFVL SGAAPLGKEL QDSLRRRLPQ AILGQGYGMT EAGPVLSMSL GFAKEPIPTK SGSCGTVVRN AELKVVHLET
401: RLSLGYNQPG EICIRGQQIM KEYLNDPEAT SATIDEEGWL HTGDIGYVDE DDEIFIVDRL KEVIKFKGFQ VPPAELESLL INHHSIADAA VVPQNDEVAG
501: EVPVAFVVRS NGNDITEEDV KEYVAKQVVF YKRLHKVFFV ASIPKSPSGK ILRKDLKAKL C

Arabidopsis Description

4CL34-coumarate--CoA ligase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9S777]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.