Factsheet for Bra031265.1-P

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

cytosol 2
plastid 1
peroxisome 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY19570	Canola	peroxisome	98.21	98.21
CDY71190	Canola	peroxisome	59.93	90.54
Bra031263.1-P	Field mustard	peroxisome	81.4	82.28
Bra001819.1-P	Field mustard	peroxisome	82.29	80.14
Bra001820.1-P	Field mustard	peroxisome	82.83	79.15
Bra030429.1-P	Field mustard	peroxisome	62.61	63.41
Bra031266.1-P	Field mustard	peroxisome	62.43	63.22
GSMUA_Achr4P12590_001	Banana	peroxisome	54.02	61.76
GSMUA_Achr9P22840_001	Banana	peroxisome	40.97	59.95
GSMUA_AchrUn_...	Banana	peroxisome	55.46	59.85
GSMUA_Achr1P23450_001	Banana	peroxisome	55.64	59.81
GSMUA_Achr4P05820_001	Banana	peroxisome	55.46	59.39
GSMUA_Achr7P05070_001	Banana	peroxisome	52.06	59.03
KRH02886	Soybean	peroxisome, plastid	58.32	57.8
TraesCS2D01G150400.1	Wheat	peroxisome	55.81	57.78
TraesCS2B01G171200.1	Wheat	peroxisome	55.64	57.59
Os08t0448000-01	Rice	peroxisome	55.1	57.14
TraesCS2A01G145800.1	Wheat	peroxisome	55.28	57.01
EES15085	Sorghum	peroxisome	55.99	56.7
Zm00001d032103_P001	Maize	peroxisome	55.81	56.22
TraesCS6B01G179900.2	Wheat	peroxisome	54.74	55.84
TraesCS6A01G151700.1	Wheat	peroxisome	54.38	55.68
TraesCS6D01G141700.1	Wheat	peroxisome	54.56	55.56
EER90150	Sorghum	peroxisome	55.28	55.48
Os02t0177600-01	Rice	plasma membrane	54.92	55.42
HORVU6Hr1G030390.2	Barley	peroxisome	54.56	55.15
EES04623	Sorghum	peroxisome	54.02	54.41
Os06t0656500-01	Rice	peroxisome	54.02	54.02
TraesCS7A01G496200.1	Wheat	peroxisome	53.49	53.68
TraesCS7D01G483400.1	Wheat	peroxisome	53.67	53.57
Bra004109.1-P	Field mustard	peroxisome	52.77	53.06
KRH19011	Soybean	peroxisome	53.31	53.02
Os08t0245200-01	Rice	extracellular	52.59	52.13
HORVU7Hr1G111130.3	Barley	peroxisome, plastid	54.02	51.19
EES13602	Sorghum	peroxisome	52.24	51.14
Zm00001d050224_P002	Maize	peroxisome	51.16	51.07
Zm00001d015459_P003	Maize	peroxisome	53.13	50.6
Zm00001d046915_P001	Maize	extracellular	55.46	48.51
Bra029561.1-P	Field mustard	peroxisome	38.1	39.3
HORVU0Hr1G002720.3	Barley	mitochondrion, plastid	35.06	35.9
Bra016463.1-P	Field mustard	plastid	34.53	34.9
Bra012232.1-P	Field mustard	peroxisome, plastid	34.17	34.79
Bra016466.1-P	Field mustard	peroxisome	33.81	34.49
Bra012233.1-P	Field mustard	plastid	32.92	33.95
Bra029229.1-P	Field mustard	peroxisome	33.45	33.45
Bra013369.1-P	Field mustard	peroxisome, plastid	33.99	33.16
Bra025822.1-P	Field mustard	peroxisome	31.66	32.6
Bra016464.1-P	Field mustard	plastid	32.56	32.44
Bra029560.1-P	Field mustard	peroxisome	30.59	32.02
Bra016465.1-P	Field mustard	plastid	27.01	30.75
Bra036646.1-P	Field mustard	peroxisome	34.17	12.91

Protein Annotations

EnsemblPlants:Bra031265.1	EnsemblPlants:Bra031265.1-P	EnsemblPlantsGene:Bra031265	Gene3D:3.30.300.30	Gene3D:3.40.50.12780	GO:GO:0003674
GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	InterPro:AMP-bd_C	InterPro:AMP-binding_CS	InterPro:AMP-dep_Synth/Lig
PANTHER:PTHR24096	PANTHER:PTHR24096:SF207	PFAM:PF00501	PFAM:PF13193	ScanProsite:PS00455	SUPFAM:SSF56801
UniParc:UPI0002547910	UniProt:M4ER42	MapMan:7.8.1.1	MapMan:9.2.1.3	:	:

Description

AT3G21240 (E=8e-206) 4CL2, AT4CL2 | 4CL2 (4-COUMARATE:COA LIGASE 2); 4-coumarate-CoA ligase

Coordinates

chrA05:+:16568064..16572754

Molecular Weight (calculated)

61208.5 Da

IEP (calculated)

5.826

GRAVY (calculated)

0.021

Length

559 amino acids

Sequence
(BLAST)

001: MALLQQQETL SLAKNQEPSQ DFIFRSKLPD ISIPNHLPLT DYLFQKFSGD GGGDSTATCL IDGATGRIFT YADVQITLRS IAAGLYRLGI RHGDTVMLLL
101: PNSPEFSLSF LAAAYLGAIS TPANPLFTQP EIAKQAQASG AKMIITKPCY VDKLKNLENV LIVCVPDDVP LPDGCVSFTE LTQADETELP KPEISPEDTV
201: LMPYSSGTTG LPKGVMITHK GVVTSTAQKV DGENPHLNFT GDDVIICFLP MFHTYAHNSL MLSAMRAGAA FLILPRFELN MVMEMIHKYK VTVVPMAPPV
301: VLAFVKSPDT ERYDLSSVRM MFSGSGALTK ELEDAVRLKL PNAIFGQSYG MTEMGTVAKS LAFAKNPFKI KSGSCGTVIR NAEMKVVDTI TGVSLPHNKP
401: GEICIRGDQL MKGYLNDPQA TAQTIDKDGW LHTGDIGFVD DNDEIFIVDR LKELIKFKGY QVAPAELEAL LISHPFIEDV AVVAMKDEIA GEVPVVFVVR
501: SEGSQLTEDD VMSYINKQVV HYKRIKMVFF TDCIPKAPSG KILRKDLRAR LANGLMNKS

Best Arabidopsis Sequence Match ( AT3G21230.1 )
(BLAST)

001: MVLQQQTHFL TKKIDQEDEE EEPSHDFIFR SKLPDIFIPN HLPLTDYVFQ RFSGDGDGDS STTCIIDGAT GRILTYADVQ TNMRRIAAGI HRLGIRHGDV
101: VMLLLPNSPE FALSFLAVAY LGAVSTTANP FYTQPEIAKQ AKASAAKMII TKKCLVDKLT NLKNDGVLIV CLDDDGDNGV VSSSDDGCVS FTELTQADET
201: ELLKPKISPE DTVAMPYSSG TTGLPKGVMI THKGLVTSIA QKVDGENPNL NFTANDVILC FLPMFHIYAL DALMLSAMRT GAALLIVPRF ELNLVMELIQ
301: RYKVTVVPVA PPVVLAFIKS PETERYDLSS VRIMLSGAAT LKKELEDAVR LKFPNAIFGQ GYGMTESGTV AKSLAFAKNP FKTKSGACGT VIRNAEMKVV
401: DTETGISLPR NKSGEICVRG HQLMKGYLND PEATARTIDK DGWLHTGDIG FVDDDDEIFI VDRLKELIKF KGYQVAPAEL EALLISHPSI DDAAVVAMKD
501: EVADEVPVAF VARSQGSQLT EDDVKSYVNK QVVHYKRIKM VFFIEVIPKA VSGKILRKDL RAKLETMCSK

Arabidopsis Description

4CL44-coumarate--CoA ligase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9LU36]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.