CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

cytosol 1
extracellular 1
peroxisome 3
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G483400.1	Wheat	peroxisome	86.53	86.07
TraesCS7A01G496200.1	Wheat	peroxisome	85.64	85.64
Os06t0656500-01	Rice	peroxisome	85.82	85.51
Zm00001d046915_P001	Maize	extracellular	96.05	83.72
EES04623	Sorghum	peroxisome	82.59	82.88
HORVU7Hr1G111130.3	Barley	peroxisome, plastid	85.64	80.85
GSMUA_Achr9P22840_001	Banana	peroxisome	50.81	74.08
GSMUA_Achr4P12590_001	Banana	peroxisome	64.09	73.01
GSMUA_Achr1P23450_001	Banana	peroxisome	68.04	72.88
GSMUA_AchrUn_...	Banana	peroxisome	67.5	72.59
GSMUA_Achr4P05820_001	Banana	peroxisome	67.86	72.41
GSMUA_Achr7P05070_001	Banana	peroxisome	63.91	72.21
CDY53918	Canola	peroxisome	23.7	70.59
CDY32418	Canola	peroxisome	22.62	68.85
VIT_11s0052g01090.t01	Wine grape	peroxisome	66.61	67.7
Solyc06g068650.2.1	Tomato	peroxisome	65.35	67.03
PGSC0003DMT400074444	Potato	peroxisome	64.99	66.67
Solyc03g117870.2.1	Tomato	plastid	65.17	66.61
PGSC0003DMT400036886	Potato	peroxisome	64.99	66.42
KRH02884	Soybean	peroxisome	64.99	66.18
VIT_11s0052g01110.t01	Wine grape	peroxisome	63.55	65.68
KRH02885	Soybean	peroxisome	62.48	64.93
CDY19568	Canola	peroxisome	64.09	64.67
EES15085	Sorghum	peroxisome	64.09	64.67
Bra031266.1-P	Field mustard	peroxisome	63.91	64.49
AT1G51680.1	Thale cress	peroxisome	64.63	64.17
CDY43921	Canola	peroxisome	63.38	64.07
AT3G21240.1	Thale cress	peroxisome	63.73	63.85
KRH09616	Soybean	mitochondrion, peroxisome	61.58	63.75
Bra030429.1-P	Field mustard	peroxisome	63.02	63.59
CDX87831	Canola	peroxisome	62.84	63.52
EES13602	Sorghum	peroxisome	64.99	63.4
KRH23700	Soybean	peroxisome	61.76	62.89
PGSC0003DMT400051216	Potato	peroxisome	64.09	62.52
Solyc07g008360.1.1	Tomato	peroxisome	63.02	61.8
Solyc12g042460.1.1	Tomato	peroxisome	60.68	61.68
PGSC0003DMT400037485	Potato	peroxisome	60.14	61.13
EES05680	Sorghum	peroxisome	62.12	61.13
KRH02886	Soybean	peroxisome, plastid	58.35	57.62
CDY48875	Canola	mitochondrion, plastid, vacuole	45.06	56.53
CDY19570	Canola	peroxisome	55.83	55.64
Bra031265.1-P	Field mustard	peroxisome	55.48	55.28
AT3G21230.1	Thale cress	peroxisome	55.83	54.56
CDY06431	Canola	peroxisome	54.04	54.43
CDY68920	Canola	peroxisome	53.86	54.25
Bra031263.1-P	Field mustard	peroxisome	53.86	54.25
CDX82208	Canola	peroxisome	55.48	54.02
Bra001819.1-P	Field mustard	peroxisome	55.3	53.66
KRH19011	Soybean	peroxisome	54.04	53.56
Bra001820.1-P	Field mustard	peroxisome	56.19	53.5
CDY32416	Canola	peroxisome	54.94	53.31
CDY06435	Canola	vacuole	37.7	47.19
CDY71190	Canola	peroxisome	28.73	43.24
CDY65966	Canola	peroxisome	26.93	42.49
OQU91476	Sorghum	peroxisome	39.86	39.86
KXG40154	Sorghum	peroxisome	39.32	39.6
EER95569	Sorghum	peroxisome	37.52	37.79
EER97853	Sorghum	peroxisome, plastid	35.19	35.44
EER99996	Sorghum	plastid	37.34	34.38
EES01913	Sorghum	peroxisome, plastid	34.11	34.23
KXG38810	Sorghum	peroxisome	35.01	34.03
EER98656	Sorghum	peroxisome, plastid	32.67	32.79
OQU88316	Sorghum	peroxisome, plastid	34.83	32.44
KXG38162	Sorghum	peroxisome	31.78	31.44
KXG26308	Sorghum	peroxisome	21.18	21.65

Protein Annotations

Gene3D:3.30.300.30	Gene3D:3.40.50.12780	MapMan:7.8.1.1	EntrezGene:8058452	MapMan:9.2.1.3	InterPro:AMP-bd_C
InterPro:AMP-binding_CS	InterPro:AMP-dep_Synth/Lig	UniProt:C5Z783	EnsemblPlants:EER90150	ProteinID:EER90150	ProteinID:EER90150.1
GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	PFAM:PF00501	PFAM:PF13193
ScanProsite:PS00455	PANTHER:PTHR24096	PANTHER:PTHR24096:SF149	EnsemblPlantsGene:SORBI_3010G214900	SUPFAM:SSF56801	unigene:Sbi.21794
UniParc:UPI0001A89B38	RefSeq:XP_002438783.1	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr10:-:55777184..55784716

Molecular Weight (calculated)

59459.6 Da

IEP (calculated)

4.910

GRAVY (calculated)

0.085

Length

557 amino acids

Sequence
(BLAST)

001: MGSVAEDSAA PAAASVVFRS KLPDIEIPRH LSLQAYCFER LPEVSSRPCL IDGQTGAVHT YADVERLSRT AAAALRGLGV GKGDVVMNLL RNCPEFAFVF
101: LGAARLGAAT TTANPFYTPH EIHRQAAAAG AKVIVTEACA VEKVRGFAAE RGVPVATVDG GAFDGCLELG ALMDAAEPLA DDEEVDPDDV VALPYSSGTT
201: GMPKGVMLTH RSLVTSVAQQ VDGENPNLHF SSDDVVLCVL PLFHIYSLNS VLLAGLRAGC AIVIMRKFEI GALVELVRAH GVTVAPFVPP IVVEIAKSPR
301: VGAADLASIR MVMSGAAPMG KDLQDAFMAK IPNAVLGQGY GMTEAGPVLA MCLAFAKEPF EVKSGSCGTV VRNAELKIVD PDTSESLGRN QPGEICIRGE
401: QIMKGYLNDP EATKNTIDKD GWLHTGDIGY VDDDDEIFIV DRLKEIIKYK GFQVPPAELE ALLITHPEIK DAAVVSMKDE LAGEVPVAFI IRSEGSEISE
501: NEIKQFVAKE VVFYKRINRV FFTDSIPKNP SGKILRKDLR ARLAAGIPSS DNTQSKS

Best Arabidopsis Sequence Match ( AT3G21240.1 )
(BLAST)

001: MTTQDVIVND QNDQKQCSND VIFRSRLPDI YIPNHLPLHD YIFENISEFA AKPCLINGPT GEVYTYADVH VTSRKLAAGL HNLGVKQHDV VMILLPNSPE
101: VVLTFLAASF IGAITTSANP FFTPAEISKQ AKASAAKLIV TQSRYVDKIK NLQNDGVLIV TTDSDAIPEN CLRFSELTQS EEPRVDSIPE KISPEDVVAL
201: PFSSGTTGLP KGVMLTHKGL VTSVAQQVDG ENPNLYFNRD DVILCVLPMF HIYALNSIML CSLRVGATIL IMPKFEITLL LEQIQRCKVT VAMVVPPIVL
301: AIAKSPETEK YDLSSVRMVK SGAAPLGKEL EDAISAKFPN AKLGQGYGMT EAGPVLAMSL GFAKEPFPVK SGACGTVVRN AEMKILDPDT GDSLPRNKPG
401: EICIRGNQIM KGYLNDPLAT ASTIDKDGWL HTGDVGFIDD DDELFIVDRL KELIKYKGFQ VAPAELESLL IGHPEINDVA VVAMKEEDAG EVPVAFVVRS
501: KDSNISEDEI KQFVSKQVVF YKRINKVFFT DSIPKAPSGK ILRKDLRARL ANGLMN

Arabidopsis Description

4CL2Cinnamyl alcohol dehydrogenase [Source:UniProtKB/TrEMBL;Acc:B1GUZ3]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.