CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

plastid 4
peroxisome 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	peroxisome, plastid
BaCelLo:	plastid
ChloroP:	plastid
MultiLoc:	peroxisome
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	peroxisome
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY45731	Canola	peroxisome	15.28	55.84
EER98656	Sorghum	peroxisome, plastid	53.11	53.87
GSMUA_Achr1P13470_001	Banana	peroxisome	48.85	53.29
EES01913	Sorghum	peroxisome, plastid	47.07	47.75
EER97853	Sorghum	peroxisome, plastid	46.36	47.2
VIT_17s0000g01790.t01	Wine grape	peroxisome, plastid	45.47	46.55
PGSC0003DMT400039281	Potato	peroxisome	45.47	46.38
Solyc03g111170.2.1	Tomato	nucleus	44.58	45.47
VIT_01s0010g02740.t01	Wine grape	peroxisome, plastid	44.05	45.09
KRG94318	Soybean	peroxisome, plastid	43.16	44.92
OQU88316	Sorghum	peroxisome, plastid	47.42	44.65
KRH63739	Soybean	peroxisome, plastid	45.65	44.31
CDY45730	Canola	vacuole	36.06	44.23
CDY71478	Canola	vacuole	36.06	44.23
VIT_14s0171g00290.t01	Wine grape	peroxisome	42.1	43.81
KRH57646	Soybean	peroxisome, plastid	42.45	43.3
VIT_14s0171g00300.t01	Wine grape	peroxisome	41.74	43.28
AT5G63380.1	Thale cress	peroxisome	42.98	43.06
KRH54211	Soybean	peroxisome	45.47	42.88
Bra029229.1-P	Field mustard	peroxisome	41.74	42.04
EER95569	Sorghum	peroxisome	40.85	41.59
OQU91476	Sorghum	peroxisome	36.94	37.34
KXG38810	Sorghum	peroxisome	36.94	36.3
KRG94321	Soybean	cytosol, golgi, peroxisome	19.72	35.24
KXG40154	Sorghum	peroxisome	34.46	35.08
EES04623	Sorghum	peroxisome	32.15	32.61
KRH57649	Soybean	plastid	15.99	32.14
EES13602	Sorghum	peroxisome	32.33	31.87
EER90150	Sorghum	peroxisome	31.44	31.78
EES15085	Sorghum	peroxisome	31.08	31.7
EES05680	Sorghum	peroxisome	30.73	30.57
EER99996	Sorghum	plastid	31.62	29.42
KXG26308	Sorghum	peroxisome	19.72	20.37

Protein Annotations

EnsemblPlants:KXG38162	EnsemblPlantsGene:SORBI_3001G189300	Gene3D:3.30.300.30	Gene3D:3.40.50.12780	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	InterPro:AMP-bd_C	InterPro:AMP-dep_Synth/Lig	PANTHER:PTHR24096	PANTHER:PTHR24096:SF251
PFAM:PF00501	PFAM:PF13193	ProteinID:KXG38162	ProteinID:KXG38162.1	SEG:seg	SUPFAM:SSF56801
UniParc:UPI00081AC846	UniProt:A0A1B6QJR8	MapMan:35.1	:	:	:

Description

hypothetical protein

Coordinates

chr1:-:16735178..16740816

Molecular Weight (calculated)

58984.3 Da

IEP (calculated)

7.119

GRAVY (calculated)

0.226

Length

563 amino acids

Sequence
(BLAST)

001: MDPQSGFCPS TRTFRSLRPP IPLPPEDAAV SFPSFAWSRL PSPLPAAHPA FVDASTGASL SFPALLARVR SLAAALRGGA LGVALAKGDV ALVLAPPSLD
101: VPVLYLALLS LGAVVSPLSP VSAPADVARA VALCDPSVVF ATSATVGSRL PAAASGKVSV ILLDSPRFQS FLLHGHDDEP GAGAAAAAGV PVPTTPVEVV
201: RQSDVAAIGY SSGTTGRTKA VAQSHSRLIA SALQHRSPPT RRTPGGPAVV TLLGVPMFHS YGFHMLLRGV LMAETTVVVT ATRGGAAAVL DAASRCGATQ
301: MFVAPPVVAA MARGGGGVGP EGFPDLLRIV CGGAPLSTAA ASAFHERFPD IELFLALGST EGGVISNMVY REESHRIRSA GRLCSGVEAK VVDIISGELL
401: STNEQGELCI RGPSVMLGYV GGDETSNQAF DSDGWLKTGD LCYFDEDGFL YVVDRLKDII KYKAYQVAPT ELEDVLHLIP GILDAAVISY PDEEVGQIPM
501: AFVVRQNGSK NLTEDQIMEF VAKQVAPYKK IRKVCFVDSI PRLPSGKLLR RELHKHMTLN SRL

Best Arabidopsis Sequence Match ( AT1G20480.1 )
(BLAST)

001: MAVKHGVDGD GSEIESRTLA VDRKSGFCES TSIFYSKREP MALPPNQFLD VTSFIASQPH RGKTVFVDAV TGRRLSFPEL WLGVERVAGC LYALGVRKGN
101: VVIILSPNSI LFPIVSLSVM SLGAIITTAN PINTSDEISK QIGDSRPVLA FTTCKLVSKL AAASNFNLPV VLMDDYHVPS QSYGDRVKLV GRLETMIETE
201: PSESRVKQRV NQDDTAALLY SSGTTGTSKG VMLSHRNLIA LVQAYRARFG LEQRTICTIP MCHIFGFGGF ATGLIALGWT IVVLPKFDMA KLLSAVETHR
301: SSYLSLVPPI VVAMVNGANE INSKYDLSSL HTVVAGGAPL SREVTEKFVE NYPKVKILQG YGLTESTAIA ASMFNKEETK RYGASGLLAP NVEGKIVDPD
401: TGRVLGVNQT GELWIRSPTV MKGYFKNKEA TASTIDSEGW LKTGDLCYID GDGFVFVVDR LKELIKCNGY QVAPAELEAL LLAHPEIADA AVIPIPDMKA
501: GQYPMAYIVR KVGSNLSESE IMGFVAKQVS PYKKIRKVTF LASIPKNPSG KILRRELTKL TTSKL

Arabidopsis Description

4CLL24-coumarate--CoA ligase-like 2 [Source:UniProtKB/Swiss-Prot;Acc:Q84P25]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.