Factsheet for VIT_14s0171g00300.t01

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

cytosol 2
peroxisome 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	cytosol, peroxisome
BaCelLo:	cytosol
MultiLoc:	peroxisome
Plant-mPloc:	peroxisome
PProwler:	peroxisome
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_14s0171g00290.t01	Wine grape	peroxisome	67.22	67.47
VIT_17s0000g01790.t01	Wine grape	peroxisome, plastid	58.93	58.18
KRG94318	Soybean	peroxisome, plastid	57.64	57.86
VIT_01s0010g02740.t01	Wine grape	peroxisome, plastid	57.09	56.36
KRH57646	Soybean	peroxisome, plastid	56.91	55.98
EES01913	Sorghum	peroxisome, plastid	52.67	51.53
GSMUA_Achr5P25570_001	Banana	peroxisome	51.93	51.09
TraesCS3D01G388100.1	Wheat	peroxisome	52.67	50.89
TraesCS3A01G394300.1	Wheat	peroxisome	52.3	50.71
TraesCS3B01G426300.1	Wheat	peroxisome	52.3	50.53
TraesCS3A01G394200.1	Wheat	peroxisome, plastid	51.01	49.64
HORVU4Hr1G012660.1	Barley	peroxisome	48.99	49.17
HORVU3Hr1G089000.2	Barley	peroxisome, plastid	52.49	48.63
TraesCS4B01G075900.1	Wheat	plastid	48.43	48.43
TraesCS4A01G239100.2	Wheat	plastid	48.07	48.07
EER97853	Sorghum	peroxisome, plastid	48.8	47.92
TraesCS4D01G074500.1	Wheat	plastid	47.88	47.88
Os07t0280200-01	Rice	peroxisome	49.17	47.85
TraesCS4B01G076100.1	Wheat	peroxisome	47.7	47.7
TraesCS3B01G426200.1	Wheat	peroxisome, plastid	49.17	47.68
TraesCS4D01G074700.1	Wheat	peroxisome	47.88	47.62
GSMUA_Achr1P13470_001	Banana	peroxisome	44.94	47.29
TraesCS4A01G239000.1	Wheat	peroxisome	47.7	47.01
EER98656	Sorghum	peroxisome, plastid	47.88	46.85
TraesCS4D01G074600.1	Wheat	peroxisome	47.51	46.82
HORVU4Hr1G012680.8	Barley	peroxisome	47.88	46.68
TraesCS3B01G515400.1	Wheat	peroxisome	46.96	46.36
TraesCS4B01G076000.1	Wheat	peroxisome	46.96	46.28
Zm00001d019957_P002	Maize	peroxisome	48.43	46.22
TraesCS3A01G472200.1	Wheat	peroxisome	46.59	46.0
Zm00001d018660_P001	Maize	peroxisome	47.51	45.83
Os01t0901600-01	Rice	peroxisome, plastid	50.28	45.65
TraesCS3D01G468000.1	Wheat	peroxisome	46.41	45.49
TraesCS5D01G561500.1	Wheat	peroxisome	46.04	45.05
HORVU4Hr1G012630.3	Barley	peroxisome	47.51	44.95
VIT_18s0001g00290.t01	Wine grape	peroxisome	45.3	44.81
TraesCS5B01G570100.1	Wheat	peroxisome	45.49	44.58
OQU88316	Sorghum	peroxisome, plastid	48.99	44.48
HORVU3Hr1G100420.4	Barley	peroxisome, plastid	47.33	44.31
TraesCS3D01G388000.2	Wheat	peroxisome, plastid	48.62	44.3
VIT_18s0001g00280.t01	Wine grape	peroxisome, plastid	44.57	44.08
VIT_13s0019g05260.t01	Wine grape	peroxisome	41.8	43.99
Os01t0901500-01	Rice	plastid	35.54	43.67
Zm00001d012144_P001	Maize	plastid	32.97	43.66
KRH57649	Soybean	plastid	21.92	42.5
KXG38162	Sorghum	peroxisome	43.28	41.74
VIT_06s0061g00450.t01	Wine grape	peroxisome	40.52	40.44
TraesCS4A01G238800.1	Wheat	plastid	31.12	39.12
VIT_08s0007g05050.t01	Wine grape	plastid	37.02	37.92
KRG94321	Soybean	cytosol, golgi, peroxisome	21.36	36.83
VIT_02s0109g00250.t01	Wine grape	peroxisome, plastid	38.31	36.43
VIT_11s0052g01110.t01	Wine grape	peroxisome	34.99	35.25
VIT_16s0039g02040.t01	Wine grape	peroxisome	34.81	34.49
VIT_11s0052g01090.t01	Wine grape	peroxisome	33.89	33.58
VIT_01s0010g03720.t01	Wine grape	peroxisome	33.52	32.79

Protein Annotations

EntrezGene:100242222	wikigene:100242222	Gene3D:3.30.300.30	Gene3D:3.40.50.12780	MapMan:35.1	InterPro:AMP-bd_C
InterPro:AMP-binding_CS	InterPro:AMP-dep_Synth/Lig	ProteinID:CCB62228	ProteinID:CCB62228.1	UniProt:F6I5L0	EMBL:FN596749
GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	EntrezGene:LOC100242222	wikigene:LOC100242222
PFAM:PF00501	PFAM:PF13193	ScanProsite:PS00455	PANTHER:PTHR24096	PANTHER:PTHR24096:SF160	SUPFAM:SSF56801
UniParc:UPI00015C97A3	ArrayExpress:VIT_14s0171g00300	EnsemblPlantsGene:VIT_14s0171g00300	EnsemblPlants:VIT_14s0171g00300.t01	RefSeq:XP_002270592	RefSeq:XP_002270592.1
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr14:-:26130603..26132915

Molecular Weight (calculated)

59354.4 Da

IEP (calculated)

8.309

GRAVY (calculated)

0.107

Length

543 amino acids

Sequence
(BLAST)

001: MEKSNLHIDP KSGFCSATKT FHSLKPTVEL PPQHLLLSAD AYAFSLRSGL GCPDSAALIN STTGHRLLYS EFALRSKTLA AYLQTVIGLS KGDTAFVLSS
101: NLIQVPILYF SLLSLGVIIS PANPINTQSE ISRLIELCKP VIAFSISTAA HKLPSLHHRT VIIDSFEFDS MMTGPIRELV PVEVSQSDLA AIMYSSGTTG
201: RVKGVMLTHR NLIAMTASIH EGQSVRSSPD VLLYTVPFFH MIGFFYCVKS VALNETVVVM ERFDLRRMLT LVEKFKVTHM AVVPPVLVAM AKGDATDNND
301: LTSLESVSCG GAPLGKDLCQ AFTAKFPNVA IRQGYGLTES SGAVSRLLDP EECRHWGSVG RLTGIFEAKI VDPDTGLALP PCKQGELWVR GPAVMKGYVG
401: DRKATRETLV SDGWLRTGDL CYIDGEGFLY VVDRLKELIK YKGYQVAPAE LEHLLQSHPE IVDAAVIPYP DEEAGEVPMA YVVRRPQSSL NEAQVMDFIA
501: KQVAAYKKIR RVLFVSSIPK SPAGKILRKE LRKLAVPGSL SKL

Best Arabidopsis Sequence Match ( AT5G63380.1 )
(BLAST)

001: MLTKTNDSRL IDRSSGFDQR TGIYHSLRPS LSLPPIDQPL SAAEFALSLL LKSSPPATAG KNIEALTYLV NSSSGDNLTY GELLRRVRSL AVSLRERFPS
101: LASRNVAFIL SPSSLDIPVL YLALMSIGVV VSPANPIGSE SEVSHQVEVS EPVIAFATSQ TVKKLQSSSL PLGTVLMDST EFLSWLNRSD SSSVNPFQVQ
201: VNQSDPAAIL FSSGTTGRVK GVLLTHRNLI ASTAVSHQRT LQDPVNYDRV GLFSLPLFHV FGFMMMIRAI SLGETLVLLG RFELEAMFKA VEKYKVTGMP
301: VSPPLIVALV KSELTKKYDL RSLRSLGCGG APLGKDIAER FKQKFPDVDI VQGYGLTESS GPAASTFGPE EMVKYGSVGR ISENMEAKIV DPSTGESLPP
401: GKTGELWLRG PVIMKGYVGN EKASAETVDK EGWLKTGDLC YFDSEDFLYI VDRLKELIKY KAYQVPPVEL EQILHSNPDV IDAAVVPFPD EDAGEIPMAF
501: IVRKPGSNLN EAQIIDFVAK QVTPYKKVRR VAFINAIPKN PAGKILRREL TKIAVDGNAS KL

Arabidopsis Description

4CLL94-coumarate--CoA ligase-like 9 [Source:UniProtKB/Swiss-Prot;Acc:Q84P23]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.