Factsheet for TraesCS5D01G561500.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

plastid 3
peroxisome 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	peroxisome, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	peroxisome
PProwler:	plastid
WoLF PSORT:	peroxisome
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G570100.1	Wheat	peroxisome	94.59	94.77
TraesCS4D01G074600.1	Wheat	peroxisome	81.26	81.85
TraesCS3D01G468000.1	Wheat	peroxisome	78.38	78.52
TraesCS4D01G074700.1	Wheat	peroxisome	76.4	77.66
Os07t0280200-01	Rice	peroxisome	67.93	67.56
EER98656	Sorghum	peroxisome, plastid	66.31	66.31
Zm00001d019957_P002	Maize	peroxisome	67.39	65.73
CDY45731	Canola	peroxisome	17.3	62.34
GSMUA_Achr1P13470_001	Banana	peroxisome	50.99	54.84
TraesCS3D01G388100.1	Wheat	peroxisome	50.09	49.47
VIT_17s0000g01790.t01	Wine grape	peroxisome, plastid	48.83	49.27
CDY71478	Canola	vacuole	40.18	48.58
CDY45730	Canola	vacuole	40.18	48.58
TraesCS4D01G074500.1	Wheat	plastid	47.39	48.43
PGSC0003DMT400039281	Potato	peroxisome	47.39	47.64
Solyc03g111170.2.1	Tomato	nucleus	47.03	47.28
VIT_14s0171g00300.t01	Wine grape	peroxisome	45.05	46.04
KRH63739	Soybean	peroxisome, plastid	47.93	45.86
Bra029229.1-P	Field mustard	peroxisome	45.77	45.44
VIT_14s0171g00290.t01	Wine grape	peroxisome	43.96	45.1
KRH54211	Soybean	peroxisome	47.75	44.39
AT5G63380.1	Thale cress	peroxisome	44.5	43.95
KRG94318	Soybean	peroxisome, plastid	42.52	43.62
VIT_01s0010g02740.t01	Wine grape	peroxisome, plastid	42.88	43.27
TraesCS3D01G388000.2	Wheat	peroxisome, plastid	45.23	42.11
KRH57646	Soybean	peroxisome, plastid	41.62	41.85
TraesCS4D01G323500.1	Wheat	plastid	39.64	39.93
TraesCS4D01G268400.1	Wheat	peroxisome	38.2	38.76
TraesCS1D01G200200.1	Wheat	peroxisome	38.38	37.5
TraesCS2D01G150400.1	Wheat	peroxisome	31.71	32.59
TraesCS2D01G272200.1	Wheat	plastid	36.22	32.47
TraesCS6D01G141700.1	Wheat	peroxisome	32.07	32.42
TraesCS7D01G483400.1	Wheat	peroxisome	32.43	32.14
TraesCS6D01G248000.1	Wheat	peroxisome, plasma membrane	32.25	31.51
KRH57649	Soybean	plastid	15.5	30.71
KRG94321	Soybean	cytosol, golgi, peroxisome	16.04	28.25

Protein Annotations

EnsemblPlants:TraesCS5D01G561500.1	EnsemblPlantsGene:TraesCS5D01G561500	Gene3D:3.30.300.30	Gene3D:3.40.50.12780	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	InterPro:AMP-bd_C	InterPro:AMP-binding_CS	InterPro:AMP-dep_Synth/Lig	PANTHER:PTHR24096
PANTHER:PTHR24096:SF269	PFAM:PF00501	PFAM:PF13193	ScanProsite:PS00455	SEG:seg	SUPFAM:SSF56801
MapMan:35.1	:	:	:	:	:

Description

No Description!

Coordinates

chr5D:+:562003449..562006595

Molecular Weight (calculated)

58866.7 Da

IEP (calculated)

8.713

GRAVY (calculated)

0.184

Length

555 amino acids

Sequence
(BLAST)

001: MSSTHGHGHG GSSGAGYCAT TKSFVSLRPP LPAAEVPLTF PALVLSLLPS PLPTQPALLD AATGEAISYP AFLSQVRALV GALRSRLVPL GRGDVAFVLA
101: PARLDVPVLH LALLAVGVVV SPANPALTAG EVSRLVSLSG ASVAFAVSST AAKLPAGLPT VLLDSTHFRS LLHLHNGRDE KEPAPLELDS TGVVCQSATA
201: TIHYSSGTTG PVKAVAVPHR SLIAQALGFH ALHLHVKSRK VKERTLMGAP MFHAMGFFFA LNGLARGLTT VVMTDTGTGT GLRGMLGAAE RWEVTEIMAS
301: PPVVLGITKH PRRLTSLLRV ICGGAPLPGS VAEQFRRRFP HVDLCVGYGS TETGGISLMS NQEECSRVGS TGRIYHNVEV RIVDIVTGEP LSVGQKGELC
401: VRGPSIMTGY VGDNEANAAA FDSEGWLRTG DFCYIDEDGF VFIVDRLKEF IKYKAYQVAP AELELILQSL PEIADAAVMP YPHEEAGEIP MALVVRRPGS
501: KVTEAQVMEH VAKQVAPYKK VRKVVFVDSI PKSPAGKILR RQLPNLVPSC HVSRL

Best Arabidopsis Sequence Match ( AT1G20480.1 )
(BLAST)

001: MAVKHGVDGD GSEIESRTLA VDRKSGFCES TSIFYSKREP MALPPNQFLD VTSFIASQPH RGKTVFVDAV TGRRLSFPEL WLGVERVAGC LYALGVRKGN
101: VVIILSPNSI LFPIVSLSVM SLGAIITTAN PINTSDEISK QIGDSRPVLA FTTCKLVSKL AAASNFNLPV VLMDDYHVPS QSYGDRVKLV GRLETMIETE
201: PSESRVKQRV NQDDTAALLY SSGTTGTSKG VMLSHRNLIA LVQAYRARFG LEQRTICTIP MCHIFGFGGF ATGLIALGWT IVVLPKFDMA KLLSAVETHR
301: SSYLSLVPPI VVAMVNGANE INSKYDLSSL HTVVAGGAPL SREVTEKFVE NYPKVKILQG YGLTESTAIA ASMFNKEETK RYGASGLLAP NVEGKIVDPD
401: TGRVLGVNQT GELWIRSPTV MKGYFKNKEA TASTIDSEGW LKTGDLCYID GDGFVFVVDR LKELIKCNGY QVAPAELEAL LLAHPEIADA AVIPIPDMKA
501: GQYPMAYIVR KVGSNLSESE IMGFVAKQVS PYKKIRKVTF LASIPKNPSG KILRRELTKL TTSKL

Arabidopsis Description

4CLL24-coumarate--CoA ligase-like 2 [Source:UniProtKB/Swiss-Prot;Acc:Q84P25]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.