Subcellular Localization
min:
: max
Winner_takes_all: peroxisome
Predictor Summary:
Predictor Summary:
- plastid 2
- peroxisome 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY45731 | Canola | peroxisome | 24.38 | 88.96 |
| CDY71478 | Canola | vacuole | 70.64 | 86.49 |
| CDY45730 | Canola | vacuole | 70.46 | 86.27 |
| Bra029229.1-P | Field mustard | peroxisome | 83.1 | 83.54 |
| VIT_17s0000g01790.t01 | Wine grape | peroxisome, plastid | 59.25 | 60.55 |
| PGSC0003DMT400039281 | Potato | peroxisome | 57.83 | 58.88 |
| KRH63739 | Soybean | peroxisome, plastid | 59.79 | 57.93 |
| Solyc03g111170.2.1 | Tomato | nucleus | 56.76 | 57.79 |
| KRH54211 | Soybean | peroxisome | 60.14 | 56.62 |
| EES01913 | Sorghum | peroxisome, plastid | 54.27 | 54.95 |
| TraesCS3A01G394300.1 | Wheat | peroxisome | 53.91 | 54.11 |
| TraesCS3D01G388100.1 | Wheat | peroxisome | 54.09 | 54.09 |
| GSMUA_Achr5P25570_001 | Banana | peroxisome | 52.67 | 53.62 |
| TraesCS3B01G426300.1 | Wheat | peroxisome | 53.56 | 53.56 |
| TraesCS3A01G394200.1 | Wheat | peroxisome, plastid | 52.67 | 53.05 |
| HORVU3Hr1G089000.2 | Barley | peroxisome, plastid | 53.74 | 51.54 |
| TraesCS3B01G426200.1 | Wheat | peroxisome, plastid | 51.07 | 51.25 |
| GSMUA_Achr1P13470_001 | Banana | peroxisome | 44.48 | 48.45 |
| HORVU4Hr1G012660.1 | Barley | peroxisome | 46.44 | 48.24 |
| TraesCS4D01G074700.1 | Wheat | peroxisome | 46.62 | 47.99 |
| Os01t0901600-01 | Rice | peroxisome, plastid | 50.71 | 47.66 |
| Os01t0901500-01 | Rice | plastid | 37.37 | 47.51 |
| TraesCS4B01G076100.1 | Wheat | peroxisome | 45.73 | 47.33 |
| TraesCS4A01G239000.1 | Wheat | peroxisome | 45.73 | 46.64 |
| Zm00001d012144_P001 | Maize | plastid | 33.99 | 46.59 |
| TraesCS4B01G076000.1 | Wheat | peroxisome | 45.55 | 46.46 |
| EER97853 | Sorghum | peroxisome, plastid | 45.55 | 46.29 |
| TraesCS4D01G074600.1 | Wheat | peroxisome | 45.37 | 46.28 |
| TraesCS3D01G388000.2 | Wheat | peroxisome, plastid | 48.93 | 46.14 |
| Os07t0280200-01 | Rice | peroxisome | 45.73 | 46.06 |
| Zm00001d018660_P001 | Maize | peroxisome | 46.09 | 46.0 |
| EER98656 | Sorghum | peroxisome, plastid | 45.37 | 45.95 |
| TraesCS3B01G515400.1 | Wheat | peroxisome | 44.84 | 45.82 |
| TraesCS4A01G239100.2 | Wheat | plastid | 44.13 | 45.67 |
| TraesCS3A01G472200.1 | Wheat | peroxisome | 44.66 | 45.64 |
| HORVU4Hr1G012680.8 | Barley | peroxisome | 45.2 | 45.6 |
| TraesCS4D01G074500.1 | Wheat | plastid | 43.95 | 45.49 |
| Zm00001d019957_P002 | Maize | peroxisome | 45.37 | 44.82 |
| TraesCS4B01G075900.1 | Wheat | plastid | 43.24 | 44.75 |
| OQU88316 | Sorghum | peroxisome, plastid | 47.51 | 44.65 |
| TraesCS3D01G468000.1 | Wheat | peroxisome | 43.95 | 44.58 |
| TraesCS5D01G561500.1 | Wheat | peroxisome | 43.95 | 44.5 |
| TraesCS5B01G570100.1 | Wheat | peroxisome | 43.77 | 44.4 |
| AT1G20500.1 | Thale cress | plastid | 43.42 | 44.36 |
| AT1G20510.1 | Thale cress | plastid | 42.88 | 44.14 |
| AT1G20480.1 | Thale cress | peroxisome | 43.95 | 43.72 |
| HORVU3Hr1G100420.4 | Barley | peroxisome, plastid | 44.66 | 43.28 |
| KXG38162 | Sorghum | peroxisome | 43.06 | 42.98 |
| AT5G38120.1 | Thale cress | plastid | 41.99 | 42.91 |
| AT4G05160.1 | Thale cress | peroxisome | 40.93 | 42.28 |
| HORVU4Hr1G012630.3 | Barley | peroxisome | 42.7 | 41.81 |
| TraesCS4A01G238800.1 | Wheat | plastid | 30.78 | 40.05 |
| AT1G20490.2 | Thale cress | peroxisome | 31.32 | 39.37 |
| AT4G19010.1 | Thale cress | peroxisome, plastid | 38.61 | 38.34 |
| AT1G62940.1 | Thale cress | peroxisome | 34.16 | 35.42 |
| AT3G21240.1 | Thale cress | peroxisome | 34.88 | 35.25 |
| AT1G65060.1 | Thale cress | peroxisome | 34.16 | 34.22 |
| AT1G51680.1 | Thale cress | peroxisome | 33.27 | 33.33 |
| AT3G21230.1 | Thale cress | peroxisome | 33.81 | 33.33 |
Protein Annotations
| Gene3D:3.30.300.30 | Gene3D:3.40.50.12780 | MapMan:35.1 | EntrezGene:836457 | ProteinID:AED97741.1 | InterPro:AMP-bd_C |
| InterPro:AMP-binding_CS | InterPro:AMP-dep_Synth/Lig | ArrayExpress:AT5G63380 | EnsemblPlantsGene:AT5G63380 | RefSeq:AT5G63380 | TAIR:AT5G63380 |
| RefSeq:AT5G63380-TAIR-G | EnsemblPlants:AT5G63380.1 | TAIR:AT5G63380.1 | EMBL:AY136459 | EMBL:AY250835 | EMBL:AY376731 |
| Unigene:At.27966 | ProteinID:BAB10742.1 | EMBL:BT010394 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0004321 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005777 | GO:GO:0006629 | GO:GO:0006631 | GO:GO:0006633 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009695 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0016740 | GO:GO:0016874 | GO:GO:0031408 | RefSeq:NP_201143.1 | PFAM:PF00501 | PFAM:PF13193 |
| PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 |
| PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 |
| PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 |
| PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 |
| PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 |
| PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 |
| ScanProsite:PS00455 | PANTHER:PTHR24096 | PANTHER:PTHR24096:SF251 | UniProt:Q84P23 | SUPFAM:SSF56801 | TMHMM:TMhelix |
| UniParc:UPI00000A49BA | SEG:seg | : | : | : | : |
Description
4CLL94-coumarate--CoA ligase-like 9 [Source:UniProtKB/Swiss-Prot;Acc:Q84P23]
Coordinates
chr5:-:25387411..25390227
Molecular Weight (calculated)
61281.1 Da
IEP (calculated)
8.157
GRAVY (calculated)
-0.031
Length
562 amino acids
Sequence
(BLAST)
(BLAST)
001: MLTKTNDSRL IDRSSGFDQR TGIYHSLRPS LSLPPIDQPL SAAEFALSLL LKSSPPATAG KNIEALTYLV NSSSGDNLTY GELLRRVRSL AVSLRERFPS
101: LASRNVAFIL SPSSLDIPVL YLALMSIGVV VSPANPIGSE SEVSHQVEVS EPVIAFATSQ TVKKLQSSSL PLGTVLMDST EFLSWLNRSD SSSVNPFQVQ
201: VNQSDPAAIL FSSGTTGRVK GVLLTHRNLI ASTAVSHQRT LQDPVNYDRV GLFSLPLFHV FGFMMMIRAI SLGETLVLLG RFELEAMFKA VEKYKVTGMP
301: VSPPLIVALV KSELTKKYDL RSLRSLGCGG APLGKDIAER FKQKFPDVDI VQGYGLTESS GPAASTFGPE EMVKYGSVGR ISENMEAKIV DPSTGESLPP
401: GKTGELWLRG PVIMKGYVGN EKASAETVDK EGWLKTGDLC YFDSEDFLYI VDRLKELIKY KAYQVPPVEL EQILHSNPDV IDAAVVPFPD EDAGEIPMAF
501: IVRKPGSNLN EAQIIDFVAK QVTPYKKVRR VAFINAIPKN PAGKILRREL TKIAVDGNAS KL
101: LASRNVAFIL SPSSLDIPVL YLALMSIGVV VSPANPIGSE SEVSHQVEVS EPVIAFATSQ TVKKLQSSSL PLGTVLMDST EFLSWLNRSD SSSVNPFQVQ
201: VNQSDPAAIL FSSGTTGRVK GVLLTHRNLI ASTAVSHQRT LQDPVNYDRV GLFSLPLFHV FGFMMMIRAI SLGETLVLLG RFELEAMFKA VEKYKVTGMP
301: VSPPLIVALV KSELTKKYDL RSLRSLGCGG APLGKDIAER FKQKFPDVDI VQGYGLTESS GPAASTFGPE EMVKYGSVGR ISENMEAKIV DPSTGESLPP
401: GKTGELWLRG PVIMKGYVGN EKASAETVDK EGWLKTGDLC YFDSEDFLYI VDRLKELIKY KAYQVPPVEL EQILHSNPDV IDAAVVPFPD EDAGEIPMAF
501: IVRKPGSNLN EAQIIDFVAK QVTPYKKVRR VAFINAIPKN PAGKILRREL TKIAVDGNAS KL
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.