Factsheet for TraesCS3A01G394300.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

plastid 2
peroxisome 3
endoplasmic reticulum 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	endoplasmic reticulum, peroxisome, plastid
iPSORT:	plastid
MultiLoc:	peroxisome
PProwler:	peroxisome
TargetP:	plastid
WoLF PSORT:	endoplasmic reticulum
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G426300.1	Wheat	peroxisome	98.21	97.86
TraesCS3D01G388100.1	Wheat	peroxisome	97.68	97.33
HORVU3Hr1G089000.2	Barley	peroxisome, plastid	95.89	91.64
TraesCS3A01G394200.1	Wheat	peroxisome, plastid	90.36	90.68
EES01913	Sorghum	peroxisome, plastid	84.29	85.05
Os01t0901500-01	Rice	plastid	65.54	83.03
Zm00001d012144_P001	Maize	plastid	59.29	80.98
CDY45731	Canola	peroxisome	19.29	70.13
GSMUA_Achr5P25570_001	Banana	peroxisome	60.71	61.59
CDY71478	Canola	vacuole	48.39	59.04
CDY45730	Canola	vacuole	47.68	58.17
VIT_17s0000g01790.t01	Wine grape	peroxisome, plastid	56.43	57.45
Bra029229.1-P	Field mustard	peroxisome	54.64	54.74
KRH63739	Soybean	peroxisome, plastid	56.25	54.31
PGSC0003DMT400039281	Potato	peroxisome	53.21	53.99
Solyc03g111170.2.1	Tomato	nucleus	53.21	53.99
AT5G63380.1	Thale cress	peroxisome	54.11	53.91
KRH54211	Soybean	peroxisome	56.43	52.93
VIT_14s0171g00300.t01	Wine grape	peroxisome	50.71	52.3
TraesCS4A01G239000.1	Wheat	peroxisome	50.18	51.0
TraesCS3A01G472200.1	Wheat	peroxisome	50.0	50.91
VIT_14s0171g00290.t01	Wine grape	peroxisome	49.11	50.83
TraesCS4A01G239100.2	Wheat	plastid	49.29	50.83
KRG94318	Soybean	peroxisome, plastid	48.04	49.72
KRH57646	Soybean	peroxisome, plastid	48.93	49.64
VIT_01s0010g02740.t01	Wine grape	peroxisome, plastid	47.86	48.73
TraesCS5A01G498800.1	Wheat	peroxisome	45.89	46.56
TraesCS4A01G238800.1	Wheat	plastid	33.57	43.52
TraesCS4A01G036200.1	Wheat	peroxisome	40.36	41.17
TraesCS1A01G196700.1	Wheat	peroxisome	40.71	40.14
TraesCS2A01G145800.1	Wheat	peroxisome	34.82	35.98
KRH57649	Soybean	plastid	17.5	35.0
TraesCS7A01G496200.1	Wheat	peroxisome	33.04	33.21
TraesCS6A01G266700.1	Wheat	peroxisome	33.75	32.98
TraesCS6A01G151700.1	Wheat	peroxisome	32.14	32.97
KRG94321	Soybean	cytosol, golgi, peroxisome	18.21	32.38
TraesCS2A01G272900.1	Wheat	plastid	35.36	31.94

Protein Annotations

EnsemblPlants:TraesCS3A01G394300.1	EnsemblPlantsGene:TraesCS3A01G394300	Gene3D:3.30.300.30	Gene3D:3.40.50.12780	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	InterPro:AMP-bd_C	InterPro:AMP-binding_CS	InterPro:AMP-dep_Synth/Lig	PANTHER:PTHR24096
PANTHER:PTHR24096:SF251	PFAM:PF00501	PFAM:PF13193	ScanProsite:PS00455	SEG:seg	SUPFAM:SSF56801
TIGR:cd05904	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chr3A:-:641872483..641876046

Molecular Weight (calculated)

58754.0 Da

IEP (calculated)

7.673

GRAVY (calculated)

0.180

Length

560 amino acids

Sequence
(BLAST)

001: MAETAAAAAP EGINPRSGYC AATRTFHSLR SASAGALPPE SLPVTAAAYA FSLLASPLPD RPALVDASTG IAVSYPSFLA AVRSLAGGLW SFLGLRPGDV
101: ALVVAPSRLD VPVLHFALMS IGAVVSPANP ASTPEEYAHQ VALSRPVVAF AAPEVAAKLP GHLRCVVLGS DAYKSLASAG AGSAPPPVAV KQSDTAAVLY
201: SSGTTGRVKA VAITHRNLIA LICAHAENRE RVAAEATEAG EEPPPPAVTL LPLPIFHVFG FMMVLRSVSM GETAVLMERF DFGAALRAIE RYRATLLPAA
301: PPVLVAMIKS EEARRRDLSS LLVIGVGGAP LGREVAERFV AVFPNVQIVQ GYGLTESSGS VASTVGPEES KAYGSVGKLA SHLQAKIVDP STGEALGPGQ
401: RGELWVRGPL VMKGYVGDDK ATAETVDSEG WLKTGDLCYF NEDGFLYIVD RLKELIKYKG YQVPPAELEH ILTSHPGIAD AAVIGYPDED AGQLPMAFIV
501: RQPGSNLTGQ QVMDYVAKHV APYKKIRRVA FVNAITKSPA GKILRRELVQ QALSMGASKL

Best Arabidopsis Sequence Match ( AT5G63380.1 )
(BLAST)

001: MLTKTNDSRL IDRSSGFDQR TGIYHSLRPS LSLPPIDQPL SAAEFALSLL LKSSPPATAG KNIEALTYLV NSSSGDNLTY GELLRRVRSL AVSLRERFPS
101: LASRNVAFIL SPSSLDIPVL YLALMSIGVV VSPANPIGSE SEVSHQVEVS EPVIAFATSQ TVKKLQSSSL PLGTVLMDST EFLSWLNRSD SSSVNPFQVQ
201: VNQSDPAAIL FSSGTTGRVK GVLLTHRNLI ASTAVSHQRT LQDPVNYDRV GLFSLPLFHV FGFMMMIRAI SLGETLVLLG RFELEAMFKA VEKYKVTGMP
301: VSPPLIVALV KSELTKKYDL RSLRSLGCGG APLGKDIAER FKQKFPDVDI VQGYGLTESS GPAASTFGPE EMVKYGSVGR ISENMEAKIV DPSTGESLPP
401: GKTGELWLRG PVIMKGYVGN EKASAETVDK EGWLKTGDLC YFDSEDFLYI VDRLKELIKY KAYQVPPVEL EQILHSNPDV IDAAVVPFPD EDAGEIPMAF
501: IVRKPGSNLN EAQIIDFVAK QVTPYKKVRR VAFINAIPKN PAGKILRREL TKIAVDGNAS KL

Arabidopsis Description

4CLL94-coumarate--CoA ligase-like 9 [Source:UniProtKB/Swiss-Prot;Acc:Q84P23]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.