Factsheet for VIT_14s0171g00290.t01

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

cytosol 2
peroxisome 4
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	cytosol, peroxisome, plastid
BaCelLo:	cytosol
EpiLoc:	cytosol
MultiLoc:	peroxisome
Plant-mPloc:	peroxisome
PProwler:	peroxisome
WoLF PSORT:	plastid
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_14s0171g00300.t01	Wine grape	peroxisome	67.47	67.22
KRG94318	Soybean	peroxisome, plastid	53.97	53.97
VIT_17s0000g01790.t01	Wine grape	peroxisome, plastid	53.97	53.09
VIT_01s0010g02740.t01	Wine grape	peroxisome, plastid	53.6	52.73
KRH57646	Soybean	peroxisome, plastid	53.23	52.17
EES01913	Sorghum	peroxisome, plastid	50.83	49.55
TraesCS3D01G388100.1	Wheat	peroxisome	51.02	49.11
TraesCS3A01G394300.1	Wheat	peroxisome	50.83	49.11
TraesCS3B01G426300.1	Wheat	peroxisome	50.83	48.93
TraesCS3A01G394200.1	Wheat	peroxisome, plastid	50.46	48.92
TraesCS3B01G426200.1	Wheat	peroxisome, plastid	48.98	47.32
HORVU3Hr1G089000.2	Barley	peroxisome, plastid	51.02	47.1
GSMUA_Achr5P25570_001	Banana	peroxisome	47.87	46.92
GSMUA_Achr1P13470_001	Banana	peroxisome	44.36	46.51
HORVU4Hr1G012660.1	Barley	peroxisome	46.03	46.03
TraesCS4A01G239000.1	Wheat	peroxisome	46.77	45.92
HORVU4Hr1G012680.8	Barley	peroxisome	47.13	45.78
TraesCS3B01G515400.1	Wheat	peroxisome	46.4	45.64
EER97853	Sorghum	peroxisome, plastid	46.58	45.57
TraesCS4B01G076000.1	Wheat	peroxisome	46.21	45.37
TraesCS4D01G074600.1	Wheat	peroxisome	46.03	45.19
TraesCS4B01G075900.1	Wheat	plastid	45.29	45.12
TraesCS3A01G472200.1	Wheat	peroxisome	45.84	45.09
Os01t0901600-01	Rice	peroxisome, plastid	49.72	44.98
Os07t0280200-01	Rice	peroxisome	46.4	44.98
TraesCS3D01G468000.1	Wheat	peroxisome	46.03	44.95
EER98656	Sorghum	peroxisome, plastid	46.03	44.86
TraesCS4A01G239100.2	Wheat	plastid	44.92	44.75
TraesCS4D01G074500.1	Wheat	plastid	44.92	44.75
TraesCS4D01G074700.1	Wheat	peroxisome	44.92	44.51
Zm00001d018660_P001	Maize	peroxisome	46.21	44.41
TraesCS3D01G388000.2	Wheat	peroxisome, plastid	48.61	44.13
TraesCS4B01G076100.1	Wheat	peroxisome	44.18	44.01
TraesCS5D01G561500.1	Wheat	peroxisome	45.1	43.96
Zm00001d019957_P002	Maize	peroxisome	46.21	43.94
TraesCS5B01G570100.1	Wheat	peroxisome	44.92	43.86
VIT_18s0001g00290.t01	Wine grape	peroxisome	43.99	43.35
HORVU3Hr1G100420.4	Barley	peroxisome, plastid	45.84	42.76
OQU88316	Sorghum	peroxisome, plastid	46.58	42.14
KXG38162	Sorghum	peroxisome	43.81	42.1
Os01t0901500-01	Rice	plastid	34.38	42.08
HORVU4Hr1G012630.3	Barley	peroxisome	44.55	41.99
Zm00001d012144_P001	Maize	plastid	31.61	41.71
VIT_18s0001g00280.t01	Wine grape	peroxisome, plastid	42.14	41.53
VIT_13s0019g05260.t01	Wine grape	peroxisome	39.19	41.09
VIT_06s0061g00450.t01	Wine grape	peroxisome	39.19	38.97
KRH57649	Soybean	plastid	19.59	37.86
VIT_11s0052g01110.t01	Wine grape	peroxisome	36.6	36.73
VIT_08s0007g05050.t01	Wine grape	plastid	35.86	36.6
VIT_16s0039g02040.t01	Wine grape	peroxisome	36.78	36.31
KRG94321	Soybean	cytosol, golgi, peroxisome	20.89	35.87
TraesCS4A01G238800.1	Wheat	plastid	28.28	35.42
VIT_11s0052g01090.t01	Wine grape	peroxisome	35.67	35.22
VIT_02s0109g00250.t01	Wine grape	peroxisome, plastid	36.6	34.68
VIT_01s0010g03720.t01	Wine grape	peroxisome	32.53	31.71

Protein Annotations

EntrezGene:100247354	wikigene:100247354	Gene3D:3.30.300.30	Gene3D:3.40.50.12780	MapMan:35.1	InterPro:AMP-bd_C
InterPro:AMP-binding_CS	InterPro:AMP-dep_Synth/Lig	ProteinID:CCB62227	ProteinID:CCB62227.1	UniProt:F6I5K9	EMBL:FN596749
GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	EntrezGene:LOC100247354	wikigene:LOC100247354
PFAM:PF00501	PFAM:PF13193	ScanProsite:PS00455	PANTHER:PTHR24096	PANTHER:PTHR24096:SF160	SUPFAM:SSF56801
UniParc:UPI0001984CA1	ArrayExpress:VIT_14s0171g00290	EnsemblPlantsGene:VIT_14s0171g00290	EnsemblPlants:VIT_14s0171g00290.t01	RefSeq:XP_002270555	RefSeq:XP_002270555.1

Description

No Description!

Coordinates

chr14:-:26123304..26126211

Molecular Weight (calculated)

59623.5 Da

IEP (calculated)

8.756

GRAVY (calculated)

-0.030

Length

541 amino acids

Sequence
(BLAST)

001: MGISDFAVDP RSGFCAETRT FHSLRPTVQL PPENVLLSAD AYTYSLRAPS PGDDSPVIIN STTGQRLSYS EFVRRSKTLA AYLQSIVGLN KGDAAYILSN
101: NLIQVPVLYF ALLSLGVVVS PANPINTKAE VARQTQLCRP VIAFTISTAV HKIPKLRYGT IVIDSFEFEL MMTSPRREMV DVKVSQSDLA GIMYSSGTTG
201: NVKGVMVTHR NLIAMTGSYM QRKANSPVVL LQIVPYFHVY GFHYVFKCMA MNVTVVIMEK YDLEKTIDAV EKYKVTDLAV APPVVVAMSK KAVTEGRDLS
301: SLETVASGGA PLGKELIEAF TAKFPGTVIS QGYGMTEVIG RISEALDREE CSRWGSSGKF PGIWEAKIVD QETGASLPPL KRGELWVKGP SIMKGYVNDP
401: KATSETLTPD GWLRTGDLCY IDEDGFLFIV DRLKELIKYK GYQVAPAELE HLLQSHPQIV DAAVIPYPDD EAGQVPMAFI VRRPESKLDE AQVMDFIAKQ
501: VAPYKKIRRV SFVTSIPKNA SGKILRKELK KISLPESFPK L

Best Arabidopsis Sequence Match ( AT5G63380.1 )
(BLAST)

001: MLTKTNDSRL IDRSSGFDQR TGIYHSLRPS LSLPPIDQPL SAAEFALSLL LKSSPPATAG KNIEALTYLV NSSSGDNLTY GELLRRVRSL AVSLRERFPS
101: LASRNVAFIL SPSSLDIPVL YLALMSIGVV VSPANPIGSE SEVSHQVEVS EPVIAFATSQ TVKKLQSSSL PLGTVLMDST EFLSWLNRSD SSSVNPFQVQ
201: VNQSDPAAIL FSSGTTGRVK GVLLTHRNLI ASTAVSHQRT LQDPVNYDRV GLFSLPLFHV FGFMMMIRAI SLGETLVLLG RFELEAMFKA VEKYKVTGMP
301: VSPPLIVALV KSELTKKYDL RSLRSLGCGG APLGKDIAER FKQKFPDVDI VQGYGLTESS GPAASTFGPE EMVKYGSVGR ISENMEAKIV DPSTGESLPP
401: GKTGELWLRG PVIMKGYVGN EKASAETVDK EGWLKTGDLC YFDSEDFLYI VDRLKELIKY KAYQVPPVEL EQILHSNPDV IDAAVVPFPD EDAGEIPMAF
501: IVRKPGSNLN EAQIIDFVAK QVTPYKKVRR VAFINAIPKN PAGKILRREL TKIAVDGNAS KL

Arabidopsis Description

4CLL94-coumarate--CoA ligase-like 9 [Source:UniProtKB/Swiss-Prot;Acc:Q84P23]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.