Factsheet for TraesCS4D01G074600.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

plastid 1
mitochondrion 3
peroxisome 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G239000.1	Wheat	peroxisome	96.19	96.19
TraesCS4B01G076000.1	Wheat	peroxisome	94.74	94.74
HORVU4Hr1G012680.8	Barley	peroxisome	90.74	89.77
TraesCS3D01G468000.1	Wheat	peroxisome	85.84	85.38
TraesCS4D01G074700.1	Wheat	peroxisome	84.03	84.8
TraesCS5D01G561500.1	Wheat	peroxisome	81.85	81.26
Os07t0280200-01	Rice	peroxisome	72.41	71.51
Zm00001d019957_P002	Maize	peroxisome	73.68	71.35
EER98656	Sorghum	peroxisome, plastid	71.87	71.35
CDY45731	Canola	peroxisome	17.79	63.64
GSMUA_Achr1P13470_001	Banana	peroxisome	53.54	57.17
VIT_17s0000g01790.t01	Wine grape	peroxisome, plastid	50.45	50.55
TraesCS3D01G388100.1	Wheat	peroxisome	51.54	50.53
TraesCS4D01G074500.1	Wheat	plastid	49.73	50.46
CDY71478	Canola	vacuole	40.83	49.02
CDY45730	Canola	vacuole	40.83	49.02
PGSC0003DMT400039281	Potato	peroxisome	48.46	48.37
Solyc03g111170.2.1	Tomato	nucleus	48.09	48.01
VIT_14s0171g00300.t01	Wine grape	peroxisome	46.82	47.51
KRH63739	Soybean	peroxisome, plastid	49.55	47.07
Bra029229.1-P	Field mustard	peroxisome	47.37	46.69
VIT_14s0171g00290.t01	Wine grape	peroxisome	45.19	46.03
AT5G63380.1	Thale cress	peroxisome	46.28	45.37
KRH54211	Soybean	peroxisome	49.0	45.23
KRG94318	Soybean	peroxisome, plastid	44.28	45.1
VIT_01s0010g02740.t01	Wine grape	peroxisome, plastid	44.28	44.36
KRH57646	Soybean	peroxisome, plastid	44.1	44.02
TraesCS3D01G388000.2	Wheat	peroxisome, plastid	47.19	43.62
TraesCS4D01G323500.1	Wheat	plastid	41.74	41.74
TraesCS4D01G268400.1	Wheat	peroxisome	39.2	39.49
TraesCS1D01G200200.1	Wheat	peroxisome	39.2	38.03
TraesCS2D01G150400.1	Wheat	peroxisome	31.76	32.41
TraesCS6D01G141700.1	Wheat	peroxisome	32.12	32.24
KRH57649	Soybean	plastid	16.33	32.14
TraesCS2D01G272200.1	Wheat	plastid	35.75	31.83
TraesCS7D01G483400.1	Wheat	peroxisome	31.94	31.43
KRG94321	Soybean	cytosol, golgi, peroxisome	17.97	31.43
TraesCS6D01G248000.1	Wheat	peroxisome, plasma membrane	32.12	31.16

Protein Annotations

EnsemblPlants:TraesCS4D01G074600.1	EnsemblPlantsGene:TraesCS4D01G074600	Gene3D:3.30.300.30	Gene3D:3.40.50.12780	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	InterPro:AMP-bd_C	InterPro:AMP-binding_CS	InterPro:AMP-dep_Synth/Lig	PANTHER:PTHR24096
PANTHER:PTHR24096:SF269	PFAM:PF00501	PFAM:PF13193	ScanProsite:PS00455	SEG:seg	SUPFAM:SSF56801
TIGR:cd05904	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chr4D:+:49243870..49252346

Molecular Weight (calculated)

58509.0 Da

IEP (calculated)

8.392

GRAVY (calculated)

0.156

Length

551 amino acids

Sequence
(BLAST)

001: MSSALAERGG AIDARTGYRA TTRSFVSLRP PLPLPPADAP LTFPAFALSL LPSPLPAHPA LLDAATGEAV SYPAFLSQVR ALVGALRSRA IPLGRGDVAF
101: VLAPARLDVP VLYFALLAVG VVVSPANPAL TAGEVARLVA LSGASVAFAV TSTAAKLPAG LPVVLLDSTH FRSLMHDDQG ENDSAPLDAG AVCQSATATI
201: QYSSGTTGRV KAAALPHRSF IAQAAGFHAR HVRSRKVNER TLMGAPMFHS MGFFFALNGL AQGLTTVVMT DAATRAGLRG MLEAAQRWEV TEMTAAPPVV
301: LGITKDRCRL TSLARVICGG APLPTSVAEQ FRRRFPHVDL CMGYGSTEAG GISLMIDRDE CSRVGSAGRI SHNVEAKIVD IVTGEPLPVG RKGELCVRGP
401: SIMTGYVGDD EANAAAFDSE GWLKTGDLCY IDQDGFLFVV DRLKELIKYK AYQVAPAELE LVLQSLPEIV DAAVMPYPHE EAGEIPMALV VRQPGSKVTE
501: AQVMEHVARQ VAPYKKVRKV VFVDSIPKSP AGKILRRQLS DHMQPCHVSR L

Best Arabidopsis Sequence Match ( AT1G20480.1 )
(BLAST)

001: MAVKHGVDGD GSEIESRTLA VDRKSGFCES TSIFYSKREP MALPPNQFLD VTSFIASQPH RGKTVFVDAV TGRRLSFPEL WLGVERVAGC LYALGVRKGN
101: VVIILSPNSI LFPIVSLSVM SLGAIITTAN PINTSDEISK QIGDSRPVLA FTTCKLVSKL AAASNFNLPV VLMDDYHVPS QSYGDRVKLV GRLETMIETE
201: PSESRVKQRV NQDDTAALLY SSGTTGTSKG VMLSHRNLIA LVQAYRARFG LEQRTICTIP MCHIFGFGGF ATGLIALGWT IVVLPKFDMA KLLSAVETHR
301: SSYLSLVPPI VVAMVNGANE INSKYDLSSL HTVVAGGAPL SREVTEKFVE NYPKVKILQG YGLTESTAIA ASMFNKEETK RYGASGLLAP NVEGKIVDPD
401: TGRVLGVNQT GELWIRSPTV MKGYFKNKEA TASTIDSEGW LKTGDLCYID GDGFVFVVDR LKELIKCNGY QVAPAELEAL LLAHPEIADA AVIPIPDMKA
501: GQYPMAYIVR KVGSNLSESE IMGFVAKQVS PYKKIRKVTF LASIPKNPSG KILRRELTKL TTSKL

Arabidopsis Description

4CLL24-coumarate--CoA ligase-like 2 [Source:UniProtKB/Swiss-Prot;Acc:Q84P25]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.