Factsheet for TraesCS3D01G468000.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

plastid 1
mitochondrion 3
peroxisome 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	mitochondrion, peroxisome, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	peroxisome
PProwler:	mitochondrion
TargetP:	mitochondrion
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G515400.1	Wheat	peroxisome	93.68	94.36
TraesCS3A01G472200.1	Wheat	peroxisome	91.88	92.55
TraesCS4D01G074600.1	Wheat	peroxisome	85.38	85.84
HORVU3Hr1G100420.4	Barley	peroxisome, plastid	87.18	83.28
TraesCS4D01G074700.1	Wheat	peroxisome	80.51	81.69
TraesCS5D01G561500.1	Wheat	peroxisome	78.52	78.38
Os07t0280200-01	Rice	peroxisome	70.94	70.43
EER98656	Sorghum	peroxisome, plastid	69.86	69.73
Zm00001d019957_P002	Maize	peroxisome	71.48	69.6
CDY45731	Canola	peroxisome	17.15	61.69
GSMUA_Achr1P13470_001	Banana	peroxisome	51.26	55.04
TraesCS3D01G388100.1	Wheat	peroxisome	50.72	50.0
TraesCS4D01G074500.1	Wheat	plastid	48.56	49.54
VIT_17s0000g01790.t01	Wine grape	peroxisome, plastid	48.38	48.73
CDY71478	Canola	vacuole	39.89	48.15
CDY45730	Canola	vacuole	39.89	48.15
PGSC0003DMT400039281	Potato	peroxisome	47.83	48.01
Solyc03g111170.2.1	Tomato	nucleus	47.29	47.46
VIT_14s0171g00300.t01	Wine grape	peroxisome	45.49	46.41
KRH63739	Soybean	peroxisome, plastid	48.38	46.21
VIT_14s0171g00290.t01	Wine grape	peroxisome	44.95	46.03
Bra029229.1-P	Field mustard	peroxisome	46.21	45.8
KRH54211	Soybean	peroxisome	48.01	44.56
AT5G63380.1	Thale cress	peroxisome	44.58	43.95
KRG94318	Soybean	peroxisome, plastid	42.6	43.62
TraesCS3D01G388000.2	Wheat	peroxisome, plastid	46.75	43.46
VIT_01s0010g02740.t01	Wine grape	peroxisome, plastid	42.78	43.09
KRH57646	Soybean	peroxisome, plastid	42.6	42.75
TraesCS4D01G323500.1	Wheat	plastid	39.71	39.93
TraesCS4D01G268400.1	Wheat	peroxisome	38.09	38.57
TraesCS1D01G200200.1	Wheat	peroxisome	38.09	37.15
KRH57649	Soybean	plastid	15.88	31.43
TraesCS2D01G150400.1	Wheat	peroxisome	30.51	31.3
TraesCS6D01G141700.1	Wheat	peroxisome	30.87	31.15
TraesCS2D01G272200.1	Wheat	plastid	34.48	30.86
TraesCS6D01G248000.1	Wheat	peroxisome, plasma membrane	31.59	30.81
TraesCS7D01G483400.1	Wheat	peroxisome	30.69	30.36
KRG94321	Soybean	cytosol, golgi, peroxisome	17.15	30.16

Protein Annotations

EnsemblPlants:TraesCS3D01G468000.1	EnsemblPlantsGene:TraesCS3D01G468000	Gene3D:3.30.300.30	Gene3D:3.40.50.12780	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	InterPro:AMP-bd_C	InterPro:AMP-binding_CS	InterPro:AMP-dep_Synth/Lig	PANTHER:PTHR24096
PANTHER:PTHR24096:SF269	PFAM:PF00501	PFAM:PF13193	ScanProsite:PS00455	SEG:seg	SUPFAM:SSF56801
MapMan:35.1	:	:	:	:	:

Description

No Description!

Coordinates

chr3D:+:570530479..570534570

Molecular Weight (calculated)

58778.8 Da

IEP (calculated)

9.341

GRAVY (calculated)

0.204

Length

554 amino acids

Sequence
(BLAST)

001: VPRSRMSSSG HGAVDARTGY CAATKSFLSL RGPLPLPPAD VPLTFPAFAL SLLPSPLPAH PALLDAATGE TVSYPAFLSQ VRALVGALRS RALLLGRGDV
101: AFVLAPARLD VPVLYFALLA VGAVVAPANP ALTAGEVSRL VSLSGASVAF AVSATAAKLP AGLPTILLDS PHFRSLLHSD HGKNESTPLD TGAVCQSATA
201: TILYSSGTTG RVKAAAVPHR SFIARAAGLR ALHLKVKSRK ADERTLIGAP MFHTMGFFFT LNGLAQGSTT VVMTEAAARA GLRGMLEAAR RWEVTEIMAA
301: PPVVLGMTKD GCRLSSLARM ICGGAPLPGS VAEQFPRRFP HVDLCMGYGS TEAGGISLMI DREECSRIGS SGRIFHNVVA KIVDIVTGEP LSVGKKGLWV
401: RGPSIMTGYL GDDEANTASF DSEGWLKTGD LCYIDQDGFL FVVDRLKELI KYKAYQVAPA ELELVLQSLP EIVDAAVMPY PHEEAGEIPM ALVVRQPGSK
501: VTEAQVMEHV AKQVAPHMKV RRVLFVDSIP RSPAGKILRR QLKDHMQSCI VSRL

Best Arabidopsis Sequence Match ( AT1G20480.1 )
(BLAST)

001: MAVKHGVDGD GSEIESRTLA VDRKSGFCES TSIFYSKREP MALPPNQFLD VTSFIASQPH RGKTVFVDAV TGRRLSFPEL WLGVERVAGC LYALGVRKGN
101: VVIILSPNSI LFPIVSLSVM SLGAIITTAN PINTSDEISK QIGDSRPVLA FTTCKLVSKL AAASNFNLPV VLMDDYHVPS QSYGDRVKLV GRLETMIETE
201: PSESRVKQRV NQDDTAALLY SSGTTGTSKG VMLSHRNLIA LVQAYRARFG LEQRTICTIP MCHIFGFGGF ATGLIALGWT IVVLPKFDMA KLLSAVETHR
301: SSYLSLVPPI VVAMVNGANE INSKYDLSSL HTVVAGGAPL SREVTEKFVE NYPKVKILQG YGLTESTAIA ASMFNKEETK RYGASGLLAP NVEGKIVDPD
401: TGRVLGVNQT GELWIRSPTV MKGYFKNKEA TASTIDSEGW LKTGDLCYID GDGFVFVVDR LKELIKCNGY QVAPAELEAL LLAHPEIADA AVIPIPDMKA
501: GQYPMAYIVR KVGSNLSESE IMGFVAKQVS PYKKIRKVTF LASIPKNPSG KILRRELTKL TTSKL

Arabidopsis Description

4CLL24-coumarate--CoA ligase-like 2 [Source:UniProtKB/Swiss-Prot;Acc:Q84P25]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.