Factsheet for TraesCS3D01G388000.2

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid

Predictor Summary:

plastid 4
peroxisome 2
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G426200.1	Wheat	peroxisome, plastid	83.89	89.29
TraesCS3A01G394200.1	Wheat	peroxisome, plastid	81.71	87.28
TraesCS3D01G388100.1	Wheat	peroxisome	79.03	83.81
Os01t0901500-01	Rice	plastid	59.56	80.32
Zm00001d012144_P001	Maize	plastid	52.85	76.83
EES01913	Sorghum	peroxisome, plastid	71.48	76.76
GSMUA_Achr5P25570_001	Banana	peroxisome	53.52	57.79
CDY45731	Canola	peroxisome	14.43	55.84
CDY71478	Canola	vacuole	40.94	53.16
CDY45730	Canola	vacuole	40.6	52.72
VIT_17s0000g01790.t01	Wine grape	peroxisome, plastid	47.48	51.45
PGSC0003DMT400039281	Potato	peroxisome	46.31	50.0
Solyc03g111170.2.1	Tomato	nucleus	46.14	49.82
Bra029229.1-P	Field mustard	peroxisome	46.14	49.2
KRH63739	Soybean	peroxisome, plastid	47.82	49.14
AT5G63380.1	Thale cress	peroxisome	46.14	48.93
VIT_14s0171g00300.t01	Wine grape	peroxisome	44.3	48.62
VIT_14s0171g00290.t01	Wine grape	peroxisome	44.13	48.61
TraesCS4D01G074500.1	Wheat	plastid	44.13	48.43
TraesCS4D01G074700.1	Wheat	peroxisome	43.96	47.99
KRH54211	Soybean	peroxisome	47.82	47.74
KRG94318	Soybean	peroxisome, plastid	42.95	47.32
TraesCS4D01G074600.1	Wheat	peroxisome	43.62	47.19
TraesCS3D01G468000.1	Wheat	peroxisome	43.46	46.75
KRH57646	Soybean	peroxisome, plastid	43.12	46.56
VIT_01s0010g02740.t01	Wine grape	peroxisome, plastid	42.11	45.64
TraesCS5D01G561500.1	Wheat	peroxisome	42.11	45.23
TraesCS4D01G323500.1	Wheat	plastid	40.1	43.38
TraesCS4D01G268400.1	Wheat	peroxisome	35.91	39.12
TraesCS1D01G200200.1	Wheat	peroxisome	35.23	36.97
KRH57649	Soybean	plastid	16.61	35.36
TraesCS2D01G150400.1	Wheat	peroxisome	31.71	35.0
TraesCS6D01G248000.1	Wheat	peroxisome, plasma membrane	30.87	32.39
KRG94321	Soybean	cytosol, golgi, peroxisome	16.95	32.06
TraesCS6D01G141700.1	Wheat	peroxisome	29.53	32.06
TraesCS7D01G483400.1	Wheat	peroxisome	29.87	31.79
TraesCS2D01G272200.1	Wheat	plastid	31.21	30.05

Protein Annotations

Gene3D:3.30.300.30	Gene3D:3.40.50.12780	MapMan:35.1	InterPro:AMP-bd_C	InterPro:AMP-binding_CS	InterPro:AMP-dep_Synth/Lig
GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	PFAM:PF00501	PFAM:PF13193
ScanProsite:PS00455	PANTHER:PTHR24096	PANTHER:PTHR24096:SF251	SUPFAM:SSF56801	EnsemblPlantsGene:TraesCS3D01G388000	EnsemblPlants:TraesCS3D01G388000.2
TIGR:cd05904	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr3D:-:502967948..502971081

Molecular Weight (calculated)

63935.0 Da

IEP (calculated)

7.440

GRAVY (calculated)

0.057

Length

596 amino acids

Sequence
(BLAST)

001: MAEPAAAPTG IDPRSGFCAA TRTFHSVRSS SADALPPESL PITAAAYAFS LLASPLPDRP ALVDAATGIA VSYPFIIASV RSLAGGLWSS LGLRPGDVAL
101: VVAPSRLEVP VLHFALMSIG AVVSPANPAS TPEEYAHQVA LSRPVVAFAA PEVADKLPAH VSCVVLGSDA YESLSSAGAE AAPPPVAVKQ SDTAAVLYSS
201: GTTGRVKAVA ITHRNLIALM CTHAENRKRA AAEATDAGKE PPPPAVTLLP LPLFHVFGFM MVLRSVSMGD TAVLMERFDF GAVLRAIERY RVTLLPAAPP
301: VLVAMIKSEE ARRHDLSSLL VIAVGGAPLG REVAERFAAV FPSVQIVQGY GLTESSGAVA GTVRPEESMK YGSAGKLGSR LQAKIVDPTT GEALGPGQRG
401: ELWIRGPLVM KGYVGDDKAT AETVDSQGWL KTGDLCYFNE DGFLYIVDRL KELIKYKGYQ VPPAELEHIL QSHPGIADAA VIGYPDEDAG QLPMAFIVRQ
501: PGSNLTRQQV IDYVAKHHVV AKAIEDWWWD HQIVSLRAKR SHMSTHERIL HVWLRPTRKS AEWLSSMQYR NRLRERSCGA SLCSRPCPWV PPSFEW

Best Arabidopsis Sequence Match ( AT1G20480.1 )
(BLAST)

001: MAVKHGVDGD GSEIESRTLA VDRKSGFCES TSIFYSKREP MALPPNQFLD VTSFIASQPH RGKTVFVDAV TGRRLSFPEL WLGVERVAGC LYALGVRKGN
101: VVIILSPNSI LFPIVSLSVM SLGAIITTAN PINTSDEISK QIGDSRPVLA FTTCKLVSKL AAASNFNLPV VLMDDYHVPS QSYGDRVKLV GRLETMIETE
201: PSESRVKQRV NQDDTAALLY SSGTTGTSKG VMLSHRNLIA LVQAYRARFG LEQRTICTIP MCHIFGFGGF ATGLIALGWT IVVLPKFDMA KLLSAVETHR
301: SSYLSLVPPI VVAMVNGANE INSKYDLSSL HTVVAGGAPL SREVTEKFVE NYPKVKILQG YGLTESTAIA ASMFNKEETK RYGASGLLAP NVEGKIVDPD
401: TGRVLGVNQT GELWIRSPTV MKGYFKNKEA TASTIDSEGW LKTGDLCYID GDGFVFVVDR LKELIKCNGY QVAPAELEAL LLAHPEIADA AVIPIPDMKA
501: GQYPMAYIVR KVGSNLSESE IMGFVAKQVS PYKKIRKVTF LASIPKNPSG KILRRELTKL TTSKL

Arabidopsis Description

4CLL24-coumarate--CoA ligase-like 2 [Source:UniProtKB/Swiss-Prot;Acc:Q84P25]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.