Factsheet for TraesCS3A01G394200.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid

Predictor Summary:

plastid 3
peroxisome 3
endoplasmic reticulum 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G394300.1	Wheat	peroxisome	90.68	90.36
TraesCS3B01G426200.1	Wheat	peroxisome, plastid	86.74	86.43
TraesCS3D01G388000.2	Wheat	peroxisome, plastid	87.28	81.71
EES01913	Sorghum	peroxisome, plastid	80.11	80.54
Os01t0901500-01	Rice	plastid	63.26	79.86
Zm00001d012144_P001	Maize	plastid	55.91	76.1
CDY45731	Canola	peroxisome	19.35	70.13
GSMUA_Achr5P25570_001	Banana	peroxisome	59.32	59.96
CDY71478	Canola	vacuole	47.13	57.3
CDY45730	Canola	vacuole	46.42	56.43
VIT_17s0000g01790.t01	Wine grape	peroxisome, plastid	54.12	54.91
PGSC0003DMT400039281	Potato	peroxisome	52.69	53.26
Solyc03g111170.2.1	Tomato	nucleus	52.51	53.08
Bra029229.1-P	Field mustard	peroxisome	52.87	52.77
AT5G63380.1	Thale cress	peroxisome	53.05	52.67
KRH63739	Soybean	peroxisome, plastid	53.76	51.72
VIT_14s0171g00300.t01	Wine grape	peroxisome	49.64	51.01
VIT_14s0171g00290.t01	Wine grape	peroxisome	48.92	50.46
KRH54211	Soybean	peroxisome	53.76	50.25
TraesCS4A01G239000.1	Wheat	peroxisome	49.46	50.09
TraesCS4A01G239100.2	Wheat	plastid	48.39	49.72
KRG94318	Soybean	peroxisome, plastid	48.21	49.72
TraesCS3A01G472200.1	Wheat	peroxisome	48.92	49.64
KRH57646	Soybean	peroxisome, plastid	48.92	49.46
VIT_01s0010g02740.t01	Wine grape	peroxisome, plastid	46.24	46.91
TraesCS5A01G498800.1	Wheat	peroxisome	45.88	46.38
TraesCS4A01G238800.1	Wheat	plastid	33.15	42.82
TraesCS4A01G036200.1	Wheat	peroxisome	41.4	42.08
TraesCS1A01G196700.1	Wheat	peroxisome	39.78	39.08
TraesCS2A01G145800.1	Wheat	peroxisome	34.95	35.98
KRH57649	Soybean	plastid	17.56	35.0
TraesCS6A01G266700.1	Wheat	peroxisome	34.41	33.51
TraesCS7A01G496200.1	Wheat	peroxisome	33.15	33.21
TraesCS6A01G151700.1	Wheat	peroxisome	31.9	32.6
KRG94321	Soybean	cytosol, golgi, peroxisome	18.1	32.06
TraesCS2A01G272900.1	Wheat	plastid	35.48	31.94

Protein Annotations

EnsemblPlants:TraesCS3A01G394200.1	EnsemblPlantsGene:TraesCS3A01G394200	Gene3D:3.30.300.30	Gene3D:3.40.50.12780	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	InterPro:AMP-bd_C	InterPro:AMP-binding_CS	InterPro:AMP-dep_Synth/Lig	PANTHER:PTHR24096
PANTHER:PTHR24096:SF251	PFAM:PF00501	PFAM:PF13193	ScanProsite:PS00455	SEG:seg	SUPFAM:SSF56801
TIGR:cd05904	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chr3A:-:641863368..641867369

Molecular Weight (calculated)

58797.3 Da

IEP (calculated)

8.668

GRAVY (calculated)

0.191

Length

558 amino acids

Sequence
(BLAST)

001: MAEPAAAPAG IDPRSGFFAA TRTFHSVRSA SAGALPPEAL PVTAAAYAFS LLASPLPDRP ALVDASTGIA VSYPSFLAAV RSLAGGLWSS LGLRPGDVAL
101: VVAPSRLDVP VLHFALMSIG AVVSPANPAS TPEEYAHQVA LSRPVVAFAA PEVAAKLPAH VRSVVLGSDA YERLVSACAG SAPPPMAVKQ SDTAAVLYSS
201: GTTGRVRAVA ITHRNLIALM CTHSENRKRA AAEATEAGEE PPPPAVTLLP LPLFHVFGFM MVLRSVSMGD TTVLMERFDF GAVLRAIERY RVTLLPAAPP
301: VLVAMIKSEE ARRHDLSSLL VIAVGGAPLG REVAERFAAI FPSVQIVQGY GLTESSGAVA GTVRPEESMK YGSAGKLGSR LQAKVVDPAT GEALGPGQRG
401: ELWIRGPLVM KGYVGDYKAT AETVDSDGWL KTGDLCYFNE DGFLYIVDRL KELIKYKGYQ VPPAELEHIL TSHPGIADAA VIGYPDEDAG QVPMAFIVRQ
501: PGLNLTGQQV IDYVAKHVAP YKKVRRVAFV AAIPKSPAGK ILRRELVQQA MSMGASKL

Best Arabidopsis Sequence Match ( AT5G63380.1 )
(BLAST)

001: MLTKTNDSRL IDRSSGFDQR TGIYHSLRPS LSLPPIDQPL SAAEFALSLL LKSSPPATAG KNIEALTYLV NSSSGDNLTY GELLRRVRSL AVSLRERFPS
101: LASRNVAFIL SPSSLDIPVL YLALMSIGVV VSPANPIGSE SEVSHQVEVS EPVIAFATSQ TVKKLQSSSL PLGTVLMDST EFLSWLNRSD SSSVNPFQVQ
201: VNQSDPAAIL FSSGTTGRVK GVLLTHRNLI ASTAVSHQRT LQDPVNYDRV GLFSLPLFHV FGFMMMIRAI SLGETLVLLG RFELEAMFKA VEKYKVTGMP
301: VSPPLIVALV KSELTKKYDL RSLRSLGCGG APLGKDIAER FKQKFPDVDI VQGYGLTESS GPAASTFGPE EMVKYGSVGR ISENMEAKIV DPSTGESLPP
401: GKTGELWLRG PVIMKGYVGN EKASAETVDK EGWLKTGDLC YFDSEDFLYI VDRLKELIKY KAYQVPPVEL EQILHSNPDV IDAAVVPFPD EDAGEIPMAF
501: IVRKPGSNLN EAQIIDFVAK QVTPYKKVRR VAFINAIPKN PAGKILRREL TKIAVDGNAS KL

Arabidopsis Description

4CLL94-coumarate--CoA ligase-like 9 [Source:UniProtKB/Swiss-Prot;Acc:Q84P23]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.