Factsheet for TraesCS3B01G426200.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid

Predictor Summary:

plastid 4
peroxisome 2
vacuole 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome, plastid
Any Predictor:	peroxisome, plastid, vacuole
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	peroxisome
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	vacuole
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G426300.1	Wheat	peroxisome	87.14	86.83
TraesCS3A01G394200.1	Wheat	peroxisome, plastid	86.43	86.74
TraesCS3D01G388000.2	Wheat	peroxisome, plastid	89.29	83.89
Os01t0901500-01	Rice	plastid	63.93	81.0
EES01913	Sorghum	peroxisome, plastid	78.04	78.74
Zm00001d012144_P001	Maize	plastid	55.36	75.61
CDY45731	Canola	peroxisome	17.32	62.99
GSMUA_Achr5P25570_001	Banana	peroxisome	56.96	57.79
CDY71478	Canola	vacuole	45.71	55.77
CDY45730	Canola	vacuole	45.18	55.12
VIT_17s0000g01790.t01	Wine grape	peroxisome, plastid	52.5	53.45
Bra029229.1-P	Field mustard	peroxisome	51.61	51.7
PGSC0003DMT400039281	Potato	peroxisome	50.89	51.63
Solyc03g111170.2.1	Tomato	nucleus	50.71	51.45
AT5G63380.1	Thale cress	peroxisome	51.25	51.07
KRH63739	Soybean	peroxisome, plastid	51.25	49.48
VIT_14s0171g00300.t01	Wine grape	peroxisome	47.68	49.17
VIT_14s0171g00290.t01	Wine grape	peroxisome	47.32	48.98
KRG94318	Soybean	peroxisome, plastid	46.79	48.43
TraesCS3B01G515400.1	Wheat	peroxisome	47.5	48.36
TraesCS4B01G075900.1	Wheat	plastid	46.79	48.25
KRH54211	Soybean	peroxisome	51.43	48.24
KRH57646	Soybean	peroxisome, plastid	47.5	48.19
TraesCS4B01G076000.1	Wheat	peroxisome	46.79	47.55
TraesCS4B01G076100.1	Wheat	peroxisome	46.07	47.51
TraesCS5B01G570100.1	Wheat	peroxisome	46.61	47.11
VIT_01s0010g02740.t01	Wine grape	peroxisome, plastid	45.36	46.18
TraesCS4B01G326800.1	Wheat	peroxisome, plastid	43.39	44.02
TraesCS4B01G269200.1	Wheat	peroxisome	37.86	38.2
TraesCS1B01G211300.1	Wheat	peroxisome	38.75	36.97
KRH57649	Soybean	plastid	18.21	36.43
TraesCS2B01G171200.1	Wheat	peroxisome	33.75	35.0
KRG94321	Soybean	cytosol, golgi, peroxisome	18.39	32.7
TraesCS6B01G294100.1	Wheat	peroxisome	33.21	32.46
TraesCS6B01G179900.2	Wheat	peroxisome	30.89	31.57
TraesCS2B01G291100.1	Wheat	plastid	34.11	30.86

Protein Annotations

EnsemblPlants:TraesCS3B01G426200.1	EnsemblPlantsGene:TraesCS3B01G426200	Gene3D:3.30.300.30	Gene3D:3.40.50.12780	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	InterPro:AMP-bd_C	InterPro:AMP-binding_CS	InterPro:AMP-dep_Synth/Lig	PANTHER:PTHR24096
PANTHER:PTHR24096:SF251	PFAM:PF00501	PFAM:PF13193	ScanProsite:PS00455	SEG:seg	SUPFAM:SSF56801
TIGR:cd05904	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chr3B:-:664118618..664122803

Molecular Weight (calculated)

58754.0 Da

IEP (calculated)

6.900

GRAVY (calculated)

0.213

Length

560 amino acids

Sequence
(BLAST)

001: MPEPAAAPAG IDPRSGFCAA TRIFHSLRSS SAGSLPPESL PVTAAAYAFS LLASALPGRP ALVDAATGIA VSYPSFIASV RSLAGGLWSS LGLRPGDVAF
101: VVAPSRLKVP VLHFALMSIG AVVSPANPAS TPEEYAHQVA LSRPVVAFAA PEVAEKLPAS VSCVVLGSDA YETLASVGAG AAPPPVVVKQ SDTAAVLYSS
201: GTTGRVKAVA ITHRNLTALM CTHAENRKRV AAEATEAGEE PPPPAVTLLP LPLFHVFGFM MVLRSVSMGD TAVLMERFEF GAVLRAIERY RVTLLPAAPP
301: VLVAMIKSEE ARRHDLSSLL VIAVGGAPLG REVAERFAAV FPSVQIVQGY GLTESSGSVA ATIGPEESMA YGSVGKLASH LQGKIVVPAT GEALGPGQRG
401: ELWIRGPLVM KGYVGDDKAT AETVDSDGWL KTGDLCYFNE DGFLYIVDRL KELIKYKGYQ VPPAELEHTL QSHPGIADAA VIGYPDEDAG QLPMAFIVRQ
501: PGFNLTGQQV MDYVAKHVAP YKKVRRVAFV NAIPKSPAER SCGGSLCSRP CPWVPPSFEL

Best Arabidopsis Sequence Match ( AT1G20480.1 )
(BLAST)

001: MAVKHGVDGD GSEIESRTLA VDRKSGFCES TSIFYSKREP MALPPNQFLD VTSFIASQPH RGKTVFVDAV TGRRLSFPEL WLGVERVAGC LYALGVRKGN
101: VVIILSPNSI LFPIVSLSVM SLGAIITTAN PINTSDEISK QIGDSRPVLA FTTCKLVSKL AAASNFNLPV VLMDDYHVPS QSYGDRVKLV GRLETMIETE
201: PSESRVKQRV NQDDTAALLY SSGTTGTSKG VMLSHRNLIA LVQAYRARFG LEQRTICTIP MCHIFGFGGF ATGLIALGWT IVVLPKFDMA KLLSAVETHR
301: SSYLSLVPPI VVAMVNGANE INSKYDLSSL HTVVAGGAPL SREVTEKFVE NYPKVKILQG YGLTESTAIA ASMFNKEETK RYGASGLLAP NVEGKIVDPD
401: TGRVLGVNQT GELWIRSPTV MKGYFKNKEA TASTIDSEGW LKTGDLCYID GDGFVFVVDR LKELIKCNGY QVAPAELEAL LLAHPEIADA AVIPIPDMKA
501: GQYPMAYIVR KVGSNLSESE IMGFVAKQVS PYKKIRKVTF LASIPKNPSG KILRRELTKL TTSKL

Arabidopsis Description

4CLL24-coumarate--CoA ligase-like 2 [Source:UniProtKB/Swiss-Prot;Acc:Q84P25]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.