Factsheet for TraesCS4B01G076000.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

plastid 3
mitochondrion 1
peroxisome 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	peroxisome, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	peroxisome
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	peroxisome
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G239000.1	Wheat	peroxisome	94.92	94.92
TraesCS4D01G074600.1	Wheat	peroxisome	94.74	94.74
TraesCS3B01G515400.1	Wheat	peroxisome	88.93	89.09
HORVU4Hr1G012680.8	Barley	peroxisome	88.75	87.79
TraesCS4B01G076100.1	Wheat	peroxisome	84.39	85.64
TraesCS5B01G570100.1	Wheat	peroxisome	82.03	81.59
EER98656	Sorghum	peroxisome, plastid	71.87	71.35
Zm00001d019957_P002	Maize	peroxisome	73.5	71.18
Os07t0280200-01	Rice	peroxisome	71.69	70.79
CDY45731	Canola	peroxisome	17.6	62.99
GSMUA_Achr1P13470_001	Banana	peroxisome	53.72	57.36
TraesCS4B01G075900.1	Wheat	plastid	49.36	50.09
VIT_17s0000g01790.t01	Wine grape	peroxisome, plastid	49.55	49.64
TraesCS3B01G426300.1	Wheat	peroxisome	50.27	49.29
PGSC0003DMT400039281	Potato	peroxisome	48.82	48.73
CDY71478	Canola	vacuole	40.29	48.37
CDY45730	Canola	vacuole	40.29	48.37
Solyc03g111170.2.1	Tomato	nucleus	48.09	48.01
KRH63739	Soybean	peroxisome, plastid	49.73	47.24
VIT_14s0171g00300.t01	Wine grape	peroxisome	46.28	46.96
TraesCS3B01G426200.1	Wheat	peroxisome, plastid	47.55	46.79
VIT_14s0171g00290.t01	Wine grape	peroxisome	45.37	46.21
Bra029229.1-P	Field mustard	peroxisome	46.82	46.15
KRH54211	Soybean	peroxisome	49.73	45.9
AT5G63380.1	Thale cress	peroxisome	46.46	45.55
KRG94318	Soybean	peroxisome, plastid	43.38	44.18
VIT_01s0010g02740.t01	Wine grape	peroxisome, plastid	43.92	44.0
KRH57646	Soybean	peroxisome, plastid	43.38	43.3
TraesCS4B01G326800.1	Wheat	peroxisome, plastid	40.11	40.04
TraesCS4B01G269200.1	Wheat	peroxisome	39.38	39.1
TraesCS1B01G211300.1	Wheat	peroxisome	37.57	35.26
KRH57649	Soybean	plastid	16.88	33.21
TraesCS6B01G179900.2	Wheat	peroxisome	31.94	32.12
TraesCS2B01G171200.1	Wheat	peroxisome	31.4	32.04
TraesCS2B01G291100.1	Wheat	plastid	35.57	31.66
KRG94321	Soybean	cytosol, golgi, peroxisome	17.97	31.43
TraesCS6B01G294100.1	Wheat	peroxisome	32.67	31.41

Protein Annotations

EnsemblPlants:TraesCS4B01G076000.1	EnsemblPlantsGene:TraesCS4B01G076000	Gene3D:3.30.300.30	Gene3D:3.40.50.12780	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	InterPro:AMP-bd_C	InterPro:AMP-binding_CS	InterPro:AMP-dep_Synth/Lig	PANTHER:PTHR24096
PANTHER:PTHR24096:SF269	PFAM:PF00501	PFAM:PF13193	ScanProsite:PS00455	SEG:seg	SUPFAM:SSF56801
TIGR:cd05904	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chr4B:+:72652212..72661508

Molecular Weight (calculated)

58598.2 Da

IEP (calculated)

8.621

GRAVY (calculated)

0.173

Length

551 amino acids

Sequence
(BLAST)

001: MSSALAERSG AIDARTGYCA TTRSFVSLRP PLPLPPADVP LTFPAFALSL LPSPLPAHPA LLDAATGEAV SYPAFLSQVR ALVGALRSRA VPLGRGDVAF
101: VLAPARLDVP VLYFALLAVG VVVSPANPSL TAGEVARLVS LSGASVAFAV SSTAAKLPAG LPTILLDSTH FRSLLHSDQG ENESAPLDTG AVCQSATATI
201: QYSSGTTGRV KAAALPHRSF IAQAAGFHAR HVRSRKVNER TLMGAPMFHS MGFFFTLNGL AQGFTTVVMT AVATRAGLRG MLEAAQRWEV TEMTAAPPVV
301: LGITKDRCRL TSLVRVICGG APLPTSVAEQ FRRRFPHVDL CMGYGSTEAG GISLMVDRDE CSRVGSAGRI SHNVETKIVD IITGEPLSVG RKGELCVRGP
401: SIMTGYVGDG EANAAAFDSE GWLKTGDLCY IDQDGFLFVV DRLKELIKYK AYQVAPAELE LVLQSLPEII DAAVMPYPHD EAGEIPMALV VRQPGSKVTE
501: AQVMEHVAKQ VAPYKKVRKV LFIDSIPRSP AGKILRRQLS DHMQPCHVSR L

Best Arabidopsis Sequence Match ( AT1G20480.1 )
(BLAST)

001: MAVKHGVDGD GSEIESRTLA VDRKSGFCES TSIFYSKREP MALPPNQFLD VTSFIASQPH RGKTVFVDAV TGRRLSFPEL WLGVERVAGC LYALGVRKGN
101: VVIILSPNSI LFPIVSLSVM SLGAIITTAN PINTSDEISK QIGDSRPVLA FTTCKLVSKL AAASNFNLPV VLMDDYHVPS QSYGDRVKLV GRLETMIETE
201: PSESRVKQRV NQDDTAALLY SSGTTGTSKG VMLSHRNLIA LVQAYRARFG LEQRTICTIP MCHIFGFGGF ATGLIALGWT IVVLPKFDMA KLLSAVETHR
301: SSYLSLVPPI VVAMVNGANE INSKYDLSSL HTVVAGGAPL SREVTEKFVE NYPKVKILQG YGLTESTAIA ASMFNKEETK RYGASGLLAP NVEGKIVDPD
401: TGRVLGVNQT GELWIRSPTV MKGYFKNKEA TASTIDSEGW LKTGDLCYID GDGFVFVVDR LKELIKCNGY QVAPAELEAL LLAHPEIADA AVIPIPDMKA
501: GQYPMAYIVR KVGSNLSESE IMGFVAKQVS PYKKIRKVTF LASIPKNPSG KILRRELTKL TTSKL

Arabidopsis Description

4CLL24-coumarate--CoA ligase-like 2 [Source:UniProtKB/Swiss-Prot;Acc:Q84P25]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.