Factsheet for HORVU4Hr1G012680.8

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

plastid 1
peroxisome 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	peroxisome, plastid
ChloroP:	plastid
MultiLoc:	peroxisome
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G074600.1	Wheat	peroxisome	89.77	90.74
TraesCS4A01G239000.1	Wheat	peroxisome	89.23	90.2
TraesCS4B01G076000.1	Wheat	peroxisome	87.79	88.75
HORVU4Hr1G012660.1	Barley	peroxisome	80.79	83.18
HORVU3Hr1G100420.4	Barley	peroxisome, plastid	82.76	79.48
Os07t0280200-01	Rice	peroxisome	71.27	71.15
EER98656	Sorghum	peroxisome, plastid	69.66	69.91
Zm00001d019957_P002	Maize	peroxisome	71.27	69.77
CDY45731	Canola	peroxisome	17.41	62.99
GSMUA_Achr1P13470_001	Banana	peroxisome	52.42	56.59
HORVU4Hr1G072130.2	Barley	mitochondrion, peroxisome	20.83	50.88
VIT_17s0000g01790.t01	Wine grape	peroxisome, plastid	50.09	50.73
HORVU4Hr1G012630.3	Barley	peroxisome	50.99	49.48
CDY71478	Canola	vacuole	40.57	49.24
CDY45730	Canola	vacuole	40.57	49.24
PGSC0003DMT400039281	Potato	peroxisome	48.47	48.91
HORVU3Hr1G089000.2	Barley	peroxisome, plastid	51.35	48.81
Solyc03g111170.2.1	Tomato	nucleus	48.29	48.73
VIT_14s0171g00300.t01	Wine grape	peroxisome	46.68	47.88
KRH63739	Soybean	peroxisome, plastid	49.73	47.76
VIT_14s0171g00290.t01	Wine grape	peroxisome	45.78	47.13
Bra029229.1-P	Field mustard	peroxisome	47.04	46.87
KRH54211	Soybean	peroxisome	49.55	46.23
KRG94318	Soybean	peroxisome, plastid	44.17	45.47
AT5G63380.1	Thale cress	peroxisome	45.6	45.2
VIT_01s0010g02740.t01	Wine grape	peroxisome, plastid	44.52	45.09
KRH57646	Soybean	peroxisome, plastid	43.63	44.02
HORVU4Hr1G081940.3	Barley	peroxisome	41.65	42.18
HORVU2Hr1G066630.1	Barley	cytosol, mitochondrion, peroxisome, plastid	30.52	37.69
HORVU1Hr1G051190.2	Barley	peroxisome	39.68	34.75
KRH57649	Soybean	plastid	17.06	33.93
HORVU6Hr1G030390.2	Barley	peroxisome	33.03	33.27
HORVU0Hr1G018190.2	Barley	peroxisome	33.21	32.51
KRG94321	Soybean	cytosol, golgi, peroxisome	17.95	31.75
HORVU7Hr1G111130.3	Barley	peroxisome, plastid	32.85	31.02
HORVU4Hr1G072150.1	Barley	peroxisome	26.39	26.39
HORVU0Hr1G002720.3	Barley	mitochondrion, plastid	23.88	24.36

Protein Annotations

EnsemblPlants:HORVU4Hr1G012680.8	EnsemblPlantsGene:HORVU4Hr1G012680	Gene3D:3.30.300.30	Gene3D:3.40.50.12780	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	InterPro:AMP-bd_C	InterPro:AMP-binding_CS	InterPro:AMP-dep_Synth/Lig	PANTHER:PTHR24096
PANTHER:PTHR24096:SF269	PFAM:PF00501	PFAM:PF13193	ScanProsite:PS00455	SEG:seg	SUPFAM:SSF56801
UniParc:UPI000B480C76	UniProt:A0A287N961	MapMan:35.1	:	:	:

Description

No Description!

Coordinates

chrchr4H:-:42491841..42498124

Molecular Weight (calculated)

59183.7 Da

IEP (calculated)

8.383

GRAVY (calculated)

0.099

Length

557 amino acids

Sequence
(BLAST)

001: DPRVSRSTKM SSALAVDVDA RTGYCATTRS FVSLRPPPPL PLPPADVPLT FPAYALSLLP SPLPAHPALL DAATGEAVSY PAFLSQARAL AAALRSRALA
101: PLGGGDVAFV LAPPRIDVPV LYFALLAVGA VVSPANPALT SGEVSRLVAL SGASVAFAVS STAAKLPAGL PVVLLDSPRF RSLLHSDEDP APLDTGTVRQ
201: SDTATIQYSS GTTGRVKAVA LPHRSFITQA AGFHARRAES RKVNERTLMG APMFHSMGFF FALNGLAQGQ TTVVMTGAAT RAGLRGVLEA AQRWEVTEIM
301: AAPPVVLGMT KDRCRMTSLA RVICGGAPLP GSVAEQFRRQ FPHVDLCMGY GSTEAGGISL MIDRDECSRV GSTGRISHNV EAKIVDIVTG EPLPVGRKGE
401: LCVRGPSIMT GYVGDDEANA AAFDSEGWLK TGDLCYIDQD GYLFVVDRLK ELIKYKAYQV APAELELVLH SLPEIVDAAV MPYPHEEAGE IPMALVVRQP
501: GSKVTEAQVM EHVAKQVAPY KKVRKVVFVD SIPKSPAGKI LRRQLSDHMQ PCHVSRL

Best Arabidopsis Sequence Match ( AT1G20480.1 )
(BLAST)

001: MAVKHGVDGD GSEIESRTLA VDRKSGFCES TSIFYSKREP MALPPNQFLD VTSFIASQPH RGKTVFVDAV TGRRLSFPEL WLGVERVAGC LYALGVRKGN
101: VVIILSPNSI LFPIVSLSVM SLGAIITTAN PINTSDEISK QIGDSRPVLA FTTCKLVSKL AAASNFNLPV VLMDDYHVPS QSYGDRVKLV GRLETMIETE
201: PSESRVKQRV NQDDTAALLY SSGTTGTSKG VMLSHRNLIA LVQAYRARFG LEQRTICTIP MCHIFGFGGF ATGLIALGWT IVVLPKFDMA KLLSAVETHR
301: SSYLSLVPPI VVAMVNGANE INSKYDLSSL HTVVAGGAPL SREVTEKFVE NYPKVKILQG YGLTESTAIA ASMFNKEETK RYGASGLLAP NVEGKIVDPD
401: TGRVLGVNQT GELWIRSPTV MKGYFKNKEA TASTIDSEGW LKTGDLCYID GDGFVFVVDR LKELIKCNGY QVAPAELEAL LLAHPEIADA AVIPIPDMKA
501: GQYPMAYIVR KVGSNLSESE IMGFVAKQVS PYKKIRKVTF LASIPKNPSG KILRRELTKL TTSKL

Arabidopsis Description

4CLL24-coumarate--CoA ligase-like 2 [Source:UniProtKB/Swiss-Prot;Acc:Q84P25]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.